KEGG   Rickettsia massiliae AZT80: RMB_06415
Entry
RMB_06415         CDS       T01758                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rmi  Rickettsia massiliae AZT80
Pathway
rmi03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rmi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RMB_06415
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rmi03400]
    RMB_06415
Enzymes [BR:rmi01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     RMB_06415
DNA repair and recombination proteins [BR:rmi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     RMB_06415
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2 GEP5
Other DBs
NCBI-ProteinID: AFB32004
UniProt: H6QK04
Position
complement(1106948..1107763)
AA seq 271 aa
MKIVTWNINSLRLRIDLLRKLAYEHQPDIILLQETKVADSLFPLEVIKNIGYEHVIYSGQ
KSYNGVAIISKFPLNNVFSLELYNSDKRHIAAIVNDIEIHNFYVPAGGDIPDIEVNTKFK
HKLEYVRLMQEWLTTNRTKNDKMIIVGDLNIAPHEHDVWSSKQLRNVISHTDIERSLLVE
LQNALGFIDSSRHFVSLDTKFYTWWSYRNIDWKKSNRGRRLDHIWVSDNLKDALFSMHLL
PEARDWSPPSDHVPYFVTFNLQMSPRGLTMG
NT seq 816 nt   +upstreamnt  +downstreamnt
atgaagatagttacttggaatattaattcattgcgtctacggatcgatttattaagaaaa
ttagcatatgaacatcagccggatattattttacttcaagaaacaaaggtagctgactca
ttatttcctcttgaagttattaaaaatataggctatgaacatgtaatatattcagggcag
aaatcatataacggtgttgctattatttcaaaatttcctttgaataatgttttttcattg
gagttatataatagtgataaaaggcatatagcagctatagttaatgatatagaaatacat
aatttttatgttcctgccggtggtgatatacctgatatcgaggtaaatacaaaatttaag
cataagctcgaatatgtaaggttaatgcaggaatggttaacgactaaccgtactaaaaac
gataaaatgattattgtcggggacttgaacattgctccgcatgaacatgatgtatggtct
agtaagcagttgcgaaatgttatcagccataccgatattgaacgctcgttattggtagaa
ctacaaaatgcgttaggttttattgatagtagcagacatttcgtatcgcttgacacaaaa
ttttatacttggtggagttatagaaatatagattggaaaaaatctaacaggggtagaagg
cttgatcatatttgggttagcgataatttaaaagatgcattattttctatgcatttacta
ccagaagcacgtgattggtctccaccttcggatcatgtaccatattttgtgacttttaat
ttacagatgtcaccccgtggcttgaccatggggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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