KEGG   Ralstonia mannitolilytica: TK49_21060
Entry
TK49_21060        CDS       T03778                                 
Name
(GenBank) ATP-dependent DNA helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
rmn  Ralstonia mannitolilytica
Pathway
rmn03420  Nucleotide excision repair
rmn03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rmn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    TK49_21060
   03430 Mismatch repair
    TK49_21060
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rmn03400]
    TK49_21060
Enzymes [BR:rmn01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     TK49_21060
DNA repair and recombination proteins [BR:rmn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     TK49_21060
   MMR (mismatch excision repair)
    Other MMR factors
     TK49_21060
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 AAA_30 Viral_helicase1 AAA_12
Other DBs
NCBI-ProteinID: AJW47163
UniProt: A0A2N5L5L9
Position
2:complement(982950..985100)
AA seq 716 aa
MLAASPAPDTTSAPATPGYLAQLNDQQRQAVEFGISGPDAAETGPLLVLAGAGSGKTHTL
GWRVAHLVANGADPQRILLLTFSRRAASELSSRAGHLLARAMHGERTNGGLNAAGASYQT
TLPWAGTFHGIGARLLREYAERVGLAPDFTIHDRSDSADLLNVVRHELNLSTKERRFPLK
QTCLAIYSRAINAESPLNAVLKHHFPWCAMWEAQLRTLFDAYVEAKQAQHVLDYDDLLLY
WHAMVSDADLAAEIGARFDHILVDEYQDTNRLQSSILRALRPDGRGVTVVGDDAQSIYAF
RAATVRNILDFPRHFSRPARTVLLERNYRSTQPILDASNGVMRFATERFAKTLWTDRAST
HRPRLISVRDEAEQARCVAEQVLRHREGGLTLKSQAVLFRTASHSAPLEIELTRRNIPFV
KYGGLKFLEAAHVKDVLSVLRWAENPRNRIAGFRVIQLLPGAGPATAARVLDAMAEAVDP
IAALLAYEPPARLAGDWATLMALMQTLRAPKDSLAWASELEAVGAWYAPHMERLHDDAAV
RQGDLDQLARMAATYATRERFLTEMTLDPPELTSDESGEPYRDEDYLILSTIHSSKGQEW
KAVYVLNAVDGCMPADLGAGSHEELEEERRLLYVAMTRAREHLDILVPQRFYVTQQTPNG
DRHIYASRTRFIPPALLPLFEACAWPEPEPGADPAAEARAAAKVDLTKKMRGYWQK
NT seq 2151 nt   +upstreamnt  +downstreamnt
gtgcttgccgcctcccccgcccctgacaccaccagcgccccggccacgccgggctatctg
gcccaactgaacgaccagcagcgccaggcggtcgagttcggcatttcggggccagacgcg
gcggagaccggcccgctgctcgtattggccggggcaggctcgggcaagacccacacgctg
ggctggcgcgtggcacatctcgtggccaacggggcggacccgcaacgcatcctgctgctg
acgttctcgcgccgggcggcgagcgagctgtccagccgcgccggccatctgctcgcccgc
gccatgcacggtgaacgcaccaacggtgggctcaacgcggcgggcgcctcctaccagacg
accctgccgtgggctggcaccttccacggcatcggcgcgcgcctgctgcgcgaatacgcc
gagcgcgtcggcctggcacccgatttcaccatccacgatcgcagcgactcggccgacctg
ctcaacgtcgtgcgccacgagctgaacctgtcgaccaaggagcgccgcttcccgctcaag
cagacgtgcctggccatctactcgcgcgccatcaacgccgaaagcccgctgaacgccgtg
ctcaaacaccactttccgtggtgcgcgatgtgggaggcgcagctgcgcacgctcttcgac
gcatatgtcgaggccaagcaggcccagcacgtgctcgactacgacgacctgctgctctac
tggcacgcgatggtgtccgacgcggaccttgctgccgagatcggtgcgcgcttcgaccac
atcctcgtcgacgaataccaggacacgaaccggctgcagtcgtccatcctgcgggcgctg
cgcccggacggccgcggcgtgacggtggtgggcgacgacgcgcaatcgatctacgcattc
cgcgcggccacggtgcgcaacatcctcgacttcccgcgccatttttcgcgcccggcgcgc
acggtgctgctggagcgcaattaccgctcgacccagccgatcctggacgcatccaatggt
gtgatgcgctttgccaccgaacgctttgccaagacgctgtggaccgatcgggcgtcgacg
catcggccgcggctgatctcggtgcgcgacgaggccgaacaggcgcgctgcgtggccgag
caggtgctgcgtcaccgggaaggcgggctgacgctgaaatcgcaggccgtgctgttccgc
accgcgagccacagcgcgccgctcgagatcgaactcacgcgccgcaacatcccgttcgtg
aaatacggcggcctgaagtttctggaggcggcgcatgtgaaggacgtgctctcggtgctg
cgctgggccgagaacccgcgcaaccgcatcgccggctttcgcgtgatccaactgctgccg
ggcgccggccccgccacggccgcgcgcgtgctcgatgcgatggccgaagcggtggacccc
attgccgcgctcctggcctacgaaccgcccgcacgcctcgccggcgactgggccacgctc
atggcgctgatgcagaccctgcgcgcgcccaaggacagcctggcctgggccagcgaactc
gaagccgtcggcgcgtggtacgccccgcacatggaacgcctgcacgacgatgccgccgtg
cgccagggcgacctggaccagctcgcgcgcatggccgccacgtacgccacgcgcgaacgc
ttcctgaccgagatgaccctcgacccgcccgaactgaccagcgatgaatcgggcgaaccg
taccgcgacgaggactacctgatcctgtcgacgatccactcgtcgaagggccaggaatgg
aaggcggtgtatgtgctgaacgccgtggacggctgcatgcccgccgacctgggcgccggc
tcgcacgaagagctggaggaagagcgccgcctgctctacgtggcgatgacgcgtgcgcgc
gagcatctcgacatcctcgtaccgcagcgcttctacgtgacgcagcaaacacccaatggc
gatcggcacatctacgcgtcgcgcacgcgcttcattccgccggcgctgctgccgctgttc
gaagcctgcgcctggccggaaccggagcccggcgccgatccggcagccgaagcccgcgcc
gccgccaaggtagacctgaccaagaagatgcgcggctactggcagaagtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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