KEGG   Rickettsia massiliae MTU5: RMA_0463
Entry
RMA_0463          CDS       T00605                                 
Symbol
topA
Name
(GenBank) DNA topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
rms  Rickettsia massiliae MTU5
Brite
KEGG Orthology (KO) [BR:rms00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rms03032]
    RMA_0463 (topA)
   03400 DNA repair and recombination proteins [BR:rms03400]
    RMA_0463 (topA)
Enzymes [BR:rms01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     RMA_0463 (topA)
DNA replication proteins [BR:rms03032]
 Prokaryotic type
  DNA Topoisomerases
   RMA_0463 (topA)
DNA repair and recombination proteins [BR:rms03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      RMA_0463 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim Toprim_C_rpt zf-C4_Topoisom Toprim_4
Other DBs
NCBI-ProteinID: ABV84684
UniProt: A8F198
Position
complement(459071..461401)
AA seq 776 aa
MKLVIVESPAKAKTINKYLGDEFKVIASFGHIRDLPSKKGSVLPDENFAMKYDISDKAGK
YVDAIVKDAKKADAVYLATDPDREGESISWHVAEVIKEKNQVKSDDFFKRVAFNEITKKA
IIHAVENPRKLDTNLVNAQQARRALDYLVGFTLSPLLWRKLPGCKSAGRVQSVALRLICE
REDEIERFKSEEYWDISLKMQNSNNELFTAKLTHVNDQTLEKFSIINEKNAKDLIEKLKS
QKFHVDKIEKKQQKRQPQPPFITSSLQQDAARKLGFSAKKTMQIAQKLYEGVDIGKETIG
LITYMRTDGVTLSNDAIADIRKLIDKSYGDKYLPTSPRIYKSKVKNAQEAHEAIRPTNIT
YTPDSLKEKLEKDYYKLYELIWKRTIACQMENVIMNLVVANLASENKEYLAKANGSTIAF
DGFYKVYRESVDDEAEEENKMLPPLKEQEPLKTKEVIPNQHFTEPPPRYSEASLVKKLEE
LGIGRPSTYASILSVLQDRKYVALEKKRFIPEELGRLVTVFLVGFFKKYVEYDFTAGLEN
ELDEIAAGKLEWKAALNNFWSGFNHNIESVNEQKITEIISYVQKALDYHLFGENKESKVC
TSCNTGELSLKLGKFGAFLACSNYPECTFRKSIVSGNDNNENEGEPAAMPNENKVLGTDK
DGVEIYLKKGPYGPYIQLGEQEGKVKPKRSPVPASLNQNDITLDIALKLLSLPLKIGIHK
DSDEEIMVGYGKFGPYIKYMGKFIAVQKKYDFLNLSLDDAMKLIEENKEKLEKKQA
NT seq 2331 nt   +upstreamnt  +downstreamnt
atgaaattagtaatagtagaatcgccggcaaaggcaaaaacgataaataaatatttaggt
gatgagtttaaggtcattgcatcattcggtcatattagagatttaccttctaaaaaaggc
tcggtgttacctgatgaaaattttgcaatgaaatatgatatttccgataaagccggtaaa
tatgtagatgccatagttaaagatgctaaaaaagctgatgcagtatatcttgcaaccgat
cctgatcgtgaaggtgaatctatctcatggcatgttgcagaggtaataaaagaaaagaat
caagttaaatccgatgattttttcaaaagggtagcatttaacgaaatcactaaaaaagca
attattcatgccgttgaaaatcctaggaaacttgacactaacttagtaaatgcccaacaa
gcaagaagagctttagactatttagtcggctttaccctttcacctcttttatggcgtaag
ttaccaggatgtaaatcggcaggacgtgtgcagtccgtggctctgcgattaatatgtgag
cgagaagatgaaatagagcgttttaagtcagaagaatattgggatattagccttaaaatg
caaaatagtaataacgaactatttactgctaaattgactcacgtaaacgatcagacatta
gaaaaattctcaattattaacgaaaaaaacgccaaagatttaatcgaaaaattaaaatct
caaaaatttcatgttgataagatagaaaaaaaacaacaaaaacgtcaaccacaacctcct
tttattacttcatcactacaacaagacgcagcaagaaaattagggtttagtgctaaaaag
actatgcaaatagcacaaaaactttatgagggtgttgatataggtaaggaaactataggg
cttattacttatatgagaaccgacggcgttacattatcaaatgatgcaatagcagatata
cgtaagttaatcgataaaagttacggcgataaatatttaccgactagccctagaatttat
aaatccaaagtaaaaaatgctcaagaagctcatgaagcaataagacccacaaatattact
tatactcctgatagcttaaaagaaaagctagaaaaggattattataagctttatgagttg
atttggaaaagaactatagcctgccaaatggaaaatgttataatgaatttggtagttgca
aatttagcttcggaaaataaagaatatttggcaaaagcaaacggatcgactatagccttt
gacggattttacaaggtttatcgtgaaagtgtggacgatgaagctgaagaagaaaataaa
atgctgccgcctttaaaagaacaagagccacttaaaactaaagaagttattccaaatcaa
cattttaccgaaccgcctccaagatattcagaagcaagtttagtgaaaaaacttgaagag
cttgggatcggtcgtccttcgacctatgctagtattttatcggttttacaagatcgaaaa
tatgttgctcttgagaaaaaacgctttatacctgaagagcttggacgtttggtcacggta
tttttagtcggtttcttcaaaaaatacgttgaatatgattttactgcaggacttgaaaac
gaattagacgaaatagcagctggcaaacttgaatggaaagctgctttaaataatttttgg
agcggttttaaccataatattgaatcagtaaacgagcagaaaataaccgagattattagc
tatgtacagaaagcccttgattatcacttgttcggtgagaataaagaatctaaagtttgt
acttcatgtaacacgggcgagcttagcttaaaacttggtaaattcggagcgtttttagca
tgtagtaattaccctgaatgtacttttagaaaatctattgttagcggtaacgataataac
gagaatgaaggcgagcctgccgctatgcctaatgagaataaagttttaggtacggataaa
gacggagtagaaatatatctgaaaaaaggaccttacggaccttatattcaacttggcgaa
caagaaggcaaagtaaagccgaaacgtagccccgtgcctgctagcttgaaccaaaatgat
attacacttgatatagcattaaagcttctaagcttaccgctaaaaataggtattcataaa
gatagcgacgaggaaattatggtaggatacggtaaattcggtccttacataaaatatatg
ggtaaatttattgcagtgcaaaaaaaatatgattttctaaatttaagcttagatgatgcg
atgaagctaattgaagagaataaagagaaattagagaagaaacaggcgtaa

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