KEGG   Rothia mucilaginosa: RMDY18_08230Help
Entry
RMDY18_08230      CDS       T01144                                 

Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rmu  Rothia mucilaginosa
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rmu00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    RMDY18_08230
Enzymes [BR:rmu01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     RMDY18_08230
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RMDY18_08230
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
888259..889338
Genome map
AA seq 359 aa AA seqDB search
MEGTMPELPEVETVRAGIADHSLGRPVRAVRVVDARSLRRHLPGPAHFETALTGRALRGA
YRRGKYLWLTLSEADGTLADEALVVHLGMSGQLLVRDEPGGDSGSESGSDSGNESEARAA
FDEQPRHLRVALELGPVGATSVAGATGGAASANRANTGQRLLFVDQRIFGGMFLSPLVPD
VPAAVATNKVAPGEVPERFLVPEAVKHIARDPLDEFFDPAAVRRKFLRTSSGIKKVLLDQ
SVISGVGNIYADEALWRARLHYAKPARTLSAAQTRELLEAVTQVLRESLAAGGTSFDALY
VNVLGESGYFERSLNAYGRAGEPCHRCAEAGRTTLMVREPFQNRSSYRCPHCQRAPRSR
NT seq 1080 nt NT seq  +upstreamnt  +downstreamnt
ttggagggaaccatgcccgaactgcccgaggtggaaactgttcgtgcgggcatcgccgac
cattcgttgggtcgccccgtgcgggcggtgcgcgtggtcgatgcccgttcgctacgcagg
cacctgcccggtcccgcccactttgagacggcactcaccggcagggcgctgcgcggtgcc
taccgccgcggcaagtacctgtggctgaccctgagcgaggcggacggcacgcttgccgac
gaggcgctcgtggtgcatctgggcatgagcggtcagctgctcgtgcgcgatgagccgggc
ggcgactcaggcagcgaatcgggcagtgactcgggtaatgaatctgaggctcgcgcggcc
tttgatgagcagccgcggcacctgcgcgtggcgctcgagctaggaccggtgggagctacc
agcgttgcgggagccaccggtggcgcggcgagcgccaaccgggcaaacaccgggcagcgg
ttgctcttcgtggaccagcgcatcttcggcggcatgttcctcagcccgctggtaccggac
gtacccgcagcggttgcaacgaataaagtagcgccgggtgaagtaccggagcgttttctg
gtacctgaagcggtcaagcacattgcccgcgacccgctggacgaattcttcgaccccgcg
gcggtgcgccgaaagttcctgcgcacctccagcggcattaagaaggtgctgctggaccag
tcggtcatctccggcgtgggcaatatctacgccgacgaggcgctgtggcgtgcgcggctg
cactacgcgaagcccgcacgcaccctcagcgccgcccaaacccgcgaactgctggaggcg
gtcacgcaggtgctgcgcgagtccctggcggcgggcggcacaagcttcgacgccctgtac
gtgaacgtgctgggcgagtcgggctactttgagcgctcgctgaacgcctacggccgggcc
ggggagccttgccaccgttgcgcggaggcgggccgcacaaccctgatggtgcgcgaaccg
ttccagaaccgttcgtcctaccgttgcccgcactgccagcgggcgccgcgttctcgctag

DBGET integrated database retrieval system