KEGG T01003: 100359816

Rattus norvegicus (rat): 100359816

Entry

100359816 CDS T01003

Definition

rCG21620-like

Orthology

K11422

histone-lysine N-methyltransferase SETD1 [EC:2.1.1.43]

Organism

rno Rattus norvegicus (rat)

Pathway

rno00310

Lysine degradation

Class

Metabolism; Amino acid metabolism; Lysine degradation [PATH:rno00310]

SSDB

Motif

Pfam:

SET N-SET RRM_1 RRM_5 RRM_6

Other DBs

NCBI-GI:

392352531

NCBI-GeneID:

100359816

RGD:

2323325

Position

AA seq 1900 aa
MKYTTTKPRRGGCFASAAQKRDREVCKQIHAKAGEASELHSQNGSRALIGRRHSRTFNKE
RGRKMINAKKGTLRRWWLEEGGRKKHIDEFYVGPVPPKQVTFAKLNDNIRENFLRDMCKK
YGEVEEVEILYNPKTKKHLGIAKVVFATVRGAKEAVQHLHSTSVMGNIIHVELDTKGETR
MRFYELLVTGRYTPQTLPVGELDAISPIVSETLQLSDALKRLKDGNLSAGCGSGSSSVTP
NSGGTPFSQDTAYSSCRLDTPNSYGQGTPITPRLGTPFSQDSSYSSRQPTPSYLFSQDPA
ATFKARRHESKFTDAYNRRHEHHYVHNSAVAAAVAGATAPFRGSSDLSFGTVGGSGGGTP
FKTQSQDSTTYAHTPPPAQTATASGFKSAFSPYQTPAPPFPPPPEEPTATAAFGTRDSGE
FRRAPAPPPLPPSEPPAKEKPGTPPGPPPPDNNSMELGGRPTFGWSPEPCDSPGTPTLES
SPAGPEKPHDSLDSRIEMLLKEQRTKLPFLREQDSDTEIQMEGSPISSSSSQLSPLTHFG
TNSQPGFRGPSPPSSRPSSTGLEDISPTPLPDSDEDDDLGLGLGPRPPPEPGPPDPMGLL
GQTAEVNLDLAGDRTPTSERMDEAEVESEQQLGEDRASSPLERTWKSQTMRCPQPPSPAL
TAPPLPAPPGVPPPPILPPLPPFPPGLFPVMQVDMSHVLGGQWGGMPMSFQMQTQMLSRL
MTGQGTCPYPPFMAAAAAAASAGLQFVNLPPYRSPFSLSNSGPGRGQHWPPLPKFDPSVP
PPGYIPRQEDPHKATVDGVLLVVLKELKAIMKRDLNRKMVEVVAFRAFDEWWDKKERMAK
ASLTPVKSGEHKDEDRPKPKDRIASCLLESWGKGEGLGYEGLGLGIGLRGAIRLPSFKVK
RKEPPDTASSGDQKRLRPSTSVDEEDEESERERDRDMADAPCELAKRDPKSVGVRRRPGR
PLELDSGGEEDEKESLSVSSSSSASSSSGSSTTSPSSSASDKEEEERESTEEEEEEEEAE
EEEEDEERPRSHISSPSSSSSSDKDDDDDDDSDDQIDSDIDDQGTALSVASEKDNVDSEE
EEIERVTTSKAPAVSSSSSSSSSSSESSGSSEFDSSSESSSSSSSSEDEDEMTVPGEDEE
EEEEEEEKETAMATATVVAMAEESMPPVGGQDFEQDRAEVPLGPRGPLRESLCTEEEVDI
EAEDEVPEMQAPVPEESPLPMGAQELSPEPPEEPSPNTQGDMLLSPELPARETEAQPPSL
PEHGPESDLEVEPEPPPMLSLPLQPPLLPPRHPRPPSPPPEPETPEPPKPPVPLEPPPED
QPPRTPGLCGSLAKSQSTETVPATPGGEPPLSGGSSGLSLSSPQVPGSPFSYPSPSPGLS
SGGLPRTPGRDFTFTPTFPEPSGPLLLPVCPLPTGRRDERAGPLASPVLLETGLPLPLPL
PLPLPLALPVPVLRAQPRPPPQLPPLLPATLAPCPTPIKRKPGRPRRSPPSMLSLDGPLV
RPPPGPALGRDLLLLPGQPQAPIFPSAHDPRAVTLDFRNTGIPAPPPPLPPQPPPPPPPP
PVEPTKLPFKELDNQWPSEAIPPGPRRDEVTEEYMDLAKVRGPWRRPPKKRHEDLVAQSA
SPEPSPPQPLFRPRSEFEEMTILYDIWNGGIDEEDIRFLCVTYERLLQQDNGMDWLNDTL
WVYHPYILPGFGGLCPSGARSPSRHSALSVTVMGMSIPAQPHASTRAGSERRSEQRRLLS
SFTGSCDSDLLKFNQLKFRKKKLKFCKSHIHDWGLFAMEPIAADEMVIEYVGQNIRQVIA
DMREKRYEDEGIGSSYMFRVDHDTIIDATKCGNFARFINHSCNPNCYAKVITVESQKKIV
IYSKQHINVNEEITYDYKFPIEDVKIPCLCGSENCRGTLN

NT seq 5703 nt +upstreamnt +downstreamnt
atgaaatacaccaccacgaagccccggcgaggcggctgcttcgcctcggcagcccaaaag
agagaccgagaggtctgcaaacagatccacgcgaaagccggggaagcctcagagttgcac
tcacaaaatggaagccgagcgctgattggccgccgccactcccggacctttaataaagaa
aggggaaggaaaatgataaatgcaaaaaaggggactctccgtcgctggtggctggaggaa
ggagggaggaagaagcatatcgatgagttctacgtgggccctgtgcctcccaagcaggtg
acatttgccaagctgaatgacaacatccgcgaaaacttcctaagggacatgtgcaaaaag
tatggggaagttgaggaggtggagattttgtataacccgaagaccaagaaacacctgggc
atcgccaaggtagtctttgccacggtcaggggcgccaaggaggcagtccaacacttgcat
agcacttctgtcatgggtaacatcatccacgtggagctggacaccaaaggggaaactcgc
atgcgcttctatgaactgctggtcaccggccggtacacccctcagaccctcccagtgggt
gagctggatgctatttctccaattgtgagcgagaccctgcagctctcggacgctctgaag
cggctcaaagatggtaacctgtccgcaggctgtggctctggctcctcctcggtcaccccc
aatagtggcgggacccccttctcccaggatacagcctactccagctgccgtctggacaca
cccaactcctacggacaaggcaccccgatcacgccccgcctgggcacccctttctcccaa
gattccagctattccagtcgtcagcccacaccctcctacctcttcagccaggaccccgca
gcaactttcaaggccaggcggcacgagagcaagttcacagatgcctataaccgccgtcat
gaacaccattatgtccacaattccgcggtggcagctgcggtggcaggagccacggctcct
ttccgaggctcctcagacctctcttttgggacagttggcggcagtggcggcggcactccc
ttcaagactcaatcccaggattccaccacatatgcccatactccacctcctgcccaaaca
gccactgcttccggattcaaatcagccttttctccataccagactccagcacccccattc
ccgccaccccccgaggagcccactgccacagcagccttcgggacccgcgacagtggggag
ttccggagggcacccgcgcccccacccctgccgccctctgagcctccagccaaggagaag
ccgggcacacctcccggtcccccaccccctgacaacaacagcatggagctgggtggtagg
cctacctttggctggagtcctgagccctgtgacagccctggcactcctactctggagtct
tctccagcgggaccagagaagccccatgacagcctggactcccgcattgagatgctgttg
aaggaacaacgcaccaagctgcccttcctgcgggagcaggactcagacaccgagatccag
atggaaggcagccccatctcctcctcctcctcccagctctccccactcacccactttggc
actaactcccagcctggcttccgtggcccctcgccaccctcctcacgcccctctagcacg
ggcctagaggacatcagccctacaccactgcctgattccgacgaggatgatgacctgggc
ctgggcctcgggcctcggcccccacctgagccaggccccccagaccctatgggtcttcta
ggccagacagctgaggtgaatttggacctggcaggagacaggaccccgacctcagagcgg
atggatgaggctgaggtagagagcgagcagcagcttggggaggaccgggccagcagtcct
ctggagaggacatggaaatctcagacgatgagatgccctcagcccccatcaccagcgctg
actgccccacccttgccagcgcccccgggtgtcccacccccacccatccttccaccactg
ccgcccttcccgccaggactgtttcctgtgatgcaggtggacatgagccatgtgctgggt
gggcagtggggcggcatgcccatgtccttccagatgcaaacacagatgttaagccggctc
atgacaggccagggtacttgcccctacccacccttcatggccgctgccgccgctgccgct
tctgctgggctacagtttgtcaacttgcccccctaccggagcccgttctccctgagcaac
agtggcccaggacgtggacagcactggccgcccctgcccaagtttgacccctctgtgcca
ccaccaggctacataccgcgtcaggaggatccgcacaaggccacagtggatggggtcctg
ctagtagtgctcaaggaactgaaggccattatgaagcgggatctcaaccgcaagatggtg
gaggtggtggccttccgggcctttgacgaatggtgggacaaaaaggagcggatggccaag
gcctcactgacccccgtgaagtctggtgagcacaaggatgaggacaggccaaagcccaaa
gaccgaatcgcctcctgcctgctggaatcatggggcaagggcgagggcctgggttacgag
ggcctaggcctgggcattggactacggggcgccattcgcctgccctccttcaaggtcaag
aggaaggagccaccggacacagcctcttctggcgaccagaagcggctgcggccttcaacc
tctgtggatgaggaagatgaagagtcggaacgggagcgtgaccgggacatggctgatgcc
ccgtgcgaactcgccaagcgggaccccaaaagtgtgggtgtgcgacgccggccaggacgg
cccctggagctggacagcggtggggaggaggacgagaaggagtccttgtccgtgtcctca
tcttcctcagcatcctcatcctctggatcttccacaacctcaccctcatcctccgcctcg
gacaaggaagaggaggaacgagaaagcactgaggaggaggaagaggaagaggaagcagag
gaagaggaggaggatgaagagcgccccaggagccacatatcctccccctcatcctcatcc
agctctgataaggatgatgatgatgatgatgacagtgatgaccagattgattctgacatc
gacgatcagggtacagccctgtcggtggccagtgagaaggacaatgttgattctgaggaa
gaggagatagagagagtcaccacctccaaggccccggctgtgtcatcgtcgtcatcgtcg
tcgtcgtcctccagtgaaagttctggatcttctgaattcgattccagttctgagtcctca
tcctcatcttcatcctcggaggatgaagacgagatgactgtacctggggaagacgaggaa
gaggaggaggaggaggaggagaaagagaccgcaatggctacagcgacggtagtggcgatg
gccgaggagagcatgcctccagtgggcggccaggactttgagcaggatagggcagaagtg
cctctgggcccaagaggccccctgagggagtccttgtgcacagaagaggaagtggacatt
gaggccgaggacgaagtccccgagatgcaggctcctgtgccggaagagtctccattgccc
atgggtgctcaggaactgagccccgagcccccagaagagccaagcccaaacacacaaggg
gacatgttgctctctccagaactccctgccagggagacagaagctcaacccccatcactc
cctgaacatggtccagagtcagacctggaagtggagcccgagccccctccgatgctctcc
ttacccttgcagccaccattgctaccccctcgacatccccggccacccagcccaccacct
gagcccgagaccccagagccccccaaacctcctgtccccctggagcctcctcccgaagac
cagcctccacgtaccccgggcctctgtggcagtctggccaagtcacagagcacggagaca
gtgccggccaccccgggcggggagcctccactgtcagggggcagcagtggcctgtcactg
agctccccgcaggtgcctggcagcccgttctcatacccttccccgtcccctggcttgagc
agtgggggccttccacggacacctggtcgggacttcaccttcacacctaccttccctgag
cccagtgggcccttgcttctgcctgtctgccccctccccactggtcgacgagatgagcgc
gctggccccctggcctccccagtgctcctggaaactggcctgcccctcccccttcccctg
cctctgcccttacctctggcattgcctgtccctgtcctgagggcccagcctcggccgcct
ccccagctgcctcccttactgcctgctaccctagctccctgcccaacccccatcaagagg
aagccaggccggccccggcgatccccaccatctatgctgtccttggatggacctttggtc
cggccaccaccagggcctgcccttgggagggaccttctgctcctgccaggccaaccacag
gcccccattttccccagtgcacatgatccccgggccgtgaccttggacttccggaacacg
gggatcccagcccccccaccgcccctcccaccccagcctcctccacccccgccaccacca
cctgttgagcccaccaagctgcccttcaaggagctggacaaccagtggccctctgaagct
attcccccaggacctcgccgagatgaggtcactgaagagtacatggacctggccaaggtg
cggggaccatggcgacggccacctaagaagcgccacgaagacctggtggcccaatcagcc
tcacccgaaccctcaccaccccagcctctcttccggccccgctcagagtttgaggagatg
accatcctgtatgacatctggaatggtggcattgatgaggaggacatccgcttcctatgc
gtcacctacgagcgcctgttgcagcaggacaatggcatggactggctgaatgacacactc
tgggtctaccatccctatatcctgccaggttttgggggtctgtgtccttcaggagcaaga
agcccctccaggcactccgctttgtcggtcacagtcatgggtatgagcatcccagcacag
ccccatgcctctacccgggcaggctcagagcggcggtctgagcagcggcgcctcctgtcc
tccttcaccggcagctgtgacagtgacctgctcaagttcaaccagctcaagtttcggaag
aaaaagctcaagttctgtaagagccacattcacgactggggcctgtttgccatggagccc
atcgctgccgatgagatggtcattgagtacgtgggtcagaacatccgccaggtgattgca
gacatgagggagaaacggtacgaggacgaaggcatcggtagcagctacatgttcagggta
gaccacgacaccatcatcgacgccaccaagtgcggcaactttgcgcggttcattaatcac
agctgcaatcccaactgctatgccaaggtgatcacggtggagtcccagaagaaaattgtc
atctactccaagcagcacatcaatgtcaacgaggagatcacatatgactataagttcccc
attgaggacgtcaagataccctgcctctgtggctccgagaactgccgggggaccctcaac
tag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (4)   
   KEGG ENZYME (1)   
   KEGG REACTION (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (5)   
   Pfam (5)   
All databases (26)   

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