KEGG   Rattus norvegicus (rat): 108348125
Entry
108348125         CDS       T01003                                 
Symbol
Zfp239l1
Name
(RefSeq) zinc finger protein 883-like
  KO
K09228  KRAB domain-containing zinc finger protein
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    108348125 (Zfp239l1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    108348125 (Zfp239l1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    108348125 (Zfp239l1)
SSDB
Motif
Pfam: zf-H2C2_2 zf-C2H2 zf-C2H2_4 KRAB zf_UBZ zf-C2H2_jaz Zn-ribbon_8 zf-C2H2_6 C1_4 zf-BED zf-met
Other DBs
NCBI-GeneID: 108348125
NCBI-ProteinID: NP_001395986
RGD: 11511731
Ensembl: ENSRNOG00000007076
Position
7:complement(13328841..13344132)
AA seq 612 aa
MRPKLEMEPVTFEDVAVNFTSGEWTMLDSSQKKLYRDVMKETFLNLISIEKTQEENFEED
YQNLRTQVVEKDGECEHGSQCEQTQAQIPKHIVTEDMPPAITLCESSLDTRKVIGNSPLD
VHLSNQTQEKPFECKELVEKAFKHEKCWEDMGHSESFQVHGSSSENSCENQQCNVTCGSL
HCDQHQEKTHNGNNHNETTFMKCTYDQIDETTHSEVKPFVCKQCGEAFVNSSHLISHERI
HIVEKCYICKQCGKTFRYLSCFQKHERIHSGERPFVCEQCGKGFIQLKYLLMHQRIHGEN
SYECKHCEKVFTISSAHNLHENIEGGEKPYSCTHCGKAFTSPNDYNSCERIHTGENPFVC
KKCGKAFKRLGHFMNHERIHTGEKPYACKHCGKAFTSSSDRNSHERIHTGEKPFVCKTCG
KAFSRSDYLINHKRIHTGEKPYPCKYCGKAFATSSDRNSHERIHTGERSFLCKKCGKVFI
LSGDLIKHERIHTGEKPYACKHCGKAFTTSSARNSHERIHTGEKPYTCKHCTKTFTTSST
RNSHEKTHTAEKHFACNLCVKTFNSQSSYYTHKKIHSMKEKLYVCKHCGKEFTYCGNFLK
HERIHTIETLSM
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgcgtccgaagctggaaatggagccagtgacctttgaggacgtggctgtgaacttcacc
tcaggagagtggactatgttggattccagtcaaaagaagctctacagagatgtgatgaag
gagacctttctgaacctgatctccatagagaaaacacaagaagaaaattttgaagaggac
taccaaaatctcagaactcaggtggttgagaaagatggtgaatgtgaacacggtagtcag
tgtgaacaaactcaggcacagattccaaagcatattgttactgaggacatgcctcctgca
ataacactatgtgaaagcagtttggatacaagaaaagtcatcggtaattcacccttggat
gtgcacctcagtaatcaaactcaagagaaaccatttgagtgtaaggaactggtggagaag
gcttttaaacatgagaaatgttgggaagatatgggtcattctgagtcatttcaggtgcat
ggaagttctagtgagaactcatgtgaaaatcagcaatgcaatgtaacttgtgggagtctc
cattgtgatcaacatcaagagaaaactcacaatggaaataatcacaacgagaccaccttt
atgaaatgtacatatgaccagatagatgaaacaacccatagtgaagtaaagccatttgtg
tgtaagcagtgtggagaagcctttgttaattccagtcaccttatcagtcatgaacgaatt
cacatagtagaaaagtgttatatttgcaaacaatgtggaaaaacatttaggtatttgtca
tgcttccaaaaacatgaaagaattcacagtggagagaggccttttgtgtgtgagcaatgt
ggaaaaggatttattcagttgaaataccttctcatgcaccagaggattcatggagagaat
tcttatgaatgtaaacattgtgaaaaagttttcactatttccagtgcccataatcttcat
gaaaacattgaaggtggagagaaaccttattcatgtacacattgtggaaaagctttcact
agtcccaatgactataacagttgtgaaagaattcataccggagagaatcccttcgtatgt
aagaaatgtgggaaagccttcaaacgtttgggtcattttatgaatcatgaaagaattcac
actggagagaagccttatgcctgtaaacattgtggaaaagccttcaccagttccagtgac
agaaacagtcatgaaagaatacacactggagagaaaccctttgtatgtaaaacatgtggg
aaagccttcagtcgttctgattatcttatcaatcataaaaggattcatactggggagaag
ccttatccgtgtaagtattgtggaaaagcctttgccacttcaagtgacagaaacagtcat
gaaagaatccatactggtgagagatcctttctgtgtaaaaaatgtgggaaagtattcatt
ctttctggtgatcttatcaagcacgaaaggattcacactggagagaagccttatgcatgc
aaacactgtggaaaagcttttactacttcaagtgcccgtaatagtcacgaaagaattcat
actggagaaaagccttatacatgtaagcattgcacaaaaacttttaccacttccagtacc
cgtaacagtcatgaaaaaactcacactgcggagaagcatttcgcatgtaatctttgtgtg
aaaaccttcaacagtcagagttcctattacactcataaaaaaattcactctatgaaagag
aaactttatgtatgtaagcactgtgggaaagaattcacttactgtggtaatttcctcaag
catgaaagaattcacactattgagacattgtccatgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (11)   
   Pfam (11)   
All databases (36)   

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