KEGG T01003: 117036

Rattus norvegicus (rat): 117036

Entry

117036 CDS T01003

Gene name

Lamc1, B2e

Definition

laminin, gamma 1

Orthology

K05635

laminin, gamma 1

Organism

rno Rattus norvegicus (rat)

Pathway

rno04151	PI3K-Akt signaling pathway
rno04510	Focal adhesion
rno04512	ECM-receptor interaction
rno05020	Prion diseases
rno05145	Toxoplasmosis
rno05146	Amoebiasis
rno05200	Pathways in cancer
rno05222	Small cell lung cancer

Class

Environmental Information Processing; Signal transduction; PI3K-Akt signaling pathway [PATH:rno04151]
Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:rno04512]
Cellular Processes; Cell communication; Focal adhesion [PATH:rno04510]
Human Diseases; Cancers; Pathways in cancer [PATH:rno05200]
Human Diseases; Cancers; Small cell lung cancer [PATH:rno05222]
Human Diseases; Neurodegenerative diseases; Prion diseases [PATH:rno05020]
Human Diseases; Infectious diseases; Amoebiasis [PATH:rno05146]
Human Diseases; Infectious diseases; Toxoplasmosis [PATH:rno05145]

SSDB

Motif

Pfam:

Laminin_N Laminin_EGF Laminin_B

Other DBs

NCBI-GI:

NCBI-GeneID:

RGD:

Ensembl:

UniProt:

Position

13q21

AA seq 1607 aa
MTGGRRAALALQLQRRLWLLLAVLAAVACWVRAAMDECADEGGRPQRCMPEFVNAAFNVT
VVATNTCGTPPEEYCVQTGVTGVTKSCHLCDAGQLHLQHGAAFLTDYNNQADTTWWQSQT
MLAGVQYPNSINLTLHLGKAFDITYVRLKFHTSRPESFAIYKRTREDGPWIPYQYYSGSC
ENTYSKANRGFIRTGGDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQE
WVTATDIRVTLNRLNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNEFGK
LVCNCKHNTYGVDCEKCLPFFNDRPWRRATAESANQCLPCDCNGRSQECYFDPELYRSTG
HGGHCTNCRDNTDGAKCERCRENFFRLGNTEACSPCHCSPVGSLSTQCDSYGRCSCKPGV
MGDKCDRCQPGFHSLTEAGCRPCSCDPSGSTDECNVETGRCVCKDNVEGFSCERCKPGFF
NLESSNPKGCTPCFCFGHSSVCTNAVGYSVYDISSTFQIDEDGWRVEQRDGSEASLEWSS
DRQDIAVISDTYFPRYFVAPAKFLGNQVLSYGQNLSFSFRVDRRDTRLSAEDLVLEGAGL
RVSVPLIAQGNSYPSETTVKYIFRLHEATDYPWRPALSPFEFQKLLNNLTSIKIRGTYSE
RSAGYLDDVTLQSARPGPGVPATWVESCTCPVGYGGQFCETCLPGYRRETPSLGPYSPCV
LCTCNGHSETCDPETGVCDCRDNTAGPHCEKCSDGYYGDSTLGTSSDCQPCPCPGGSSCA
IVPKTKEVVCTHCPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNC
NRLTGECLKCIYNTAGFYCDRCKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNPVT
GQCQCLPHVSGRDCGACDPGFYNLQSGQGCESCDCHALGSTNGQCDIRTGQCECQPGITG
QHCERCETNHFGFGPEGCKPCDCHHEGSLSLQCKDDGRCECREGFVGNRCDQCEENYFYN
RSWPGCQECPACYRLVKDKVAEHRVKLQELESLIANLGTGDETVTDQAFEDRLKEAEREV
TDLLREAQEVKDVDQNLMDRLQRVNNSLHSQISRLHNIRNTIEETGILAERARSRVESTE
QLIEIASRELEKAKMAAANVSITQPESTGEPNNMTLLAEEARRLAERHKQEADDIVRVAK
TANETSAEAYNLLLRTLAGENQTALEIEELNRKYEQAKNISQDLEKQAARVHEEAKRAGD
KAVEIYASVAQLTPVDSEALESEANKIKKEAADLDRLIDQKLKDYEDLREDMRGKEHEVK
NLLEKGKAEQQTADQLLARADAAKALAEEAAKKGRNTLQEANDILNNLKDFDRRVNDNKT
AAEEALRRIPAINRTIAEANEKTREAQLALGNAAADATEAKNKAHEAERIASGVQKNATS
TKADAERTFSEVTDLDNEVNGMLRQLEEAENELKRKQDDADQDMMMAGMASQAAQEAELN
ARKAKNSVSSLLSQLTDLLEQLGQLDTVDLNKLNEIEGSLNKAKDEMKVSDLDRKVSNLE
NEARKQEAAILDYDRDIAEIIKDIHNLEDIKKTLPTGCFNTPSIEKP

NT seq 4824 nt +upstreamnt +downstreamnt
atgacgggcggcaggcgggccgctctggccctgcagctccagcggcggctgtggctgctg
ctggctgtgctggcggccgtggcgtgctgggtccgggcggccatggacgagtgcgcggat
gagggcggccggccgcagcgctgcatgccggagtttgttaatgccgccttcaatgtgacc
gtggtggctaccaacacgtgtgggactccacccgaggagtactgcgtgcagactggagtg
accggagtcaccaagtcctgtcacctgtgcgacgccggccagctccacctgcaacacggg
gcagccttcttgaccgactacaacaaccaggccgacaccacctggtggcaaagccagact
atgctggccggggtgcagtaccccaactccatcaacctcacgctgcacctgggaaaggct
tttgacatcacttacgtgcgtctcaagttccacaccagccgcccagagagtttcgccatt
tataagcgcactcgggaagacgggccctggattccttaccagtactacagtggctcctgt
gagaacacgtactcaaaggctaaccgtggcttcatcaggacgggaggagatgagcagcag
gccttgtgtaccgatgagttcagtgacatttcccccctcaccggcggcaacgtggccttt
tcaactctggaaggaaggccgagtgcctacaactttgacaacagccccgtgctacaggaa
tgggtgacagccactgacatcagagtcacactcaatcgcctgaacacctttggagatgaa
gtattcaatgaccccaaagtcctcaagtcttactattatgcaatctcggactttgctgtg
ggtggcaggtgtaaatgtaatggacatgccagtgagtgtgtaaagaacgagtttgggaag
ctcgtgtgcaactgcaagcataacacatacggagttgactgtgaaaagtgcctgcctttc
ttcaacgatcggccgtggaggagagcaactgccgagagtgccaaccagtgcctgccttgc
gactgcaatggccgatcccaagaatgctactttgaccctgagctataccgttccactggg
cacggtggccactgtaccaactgccgggataacacagacggtgccaagtgcgagaggtgc
cgggagaacttcttccgcctggggaacactgaagcctgctctccgtgccactgcagcccc
gttggttctctcagcacgcagtgtgacagttacggcaggtgcagctgtaagcccggagtg
atgggtgacaagtgtgaccgttgccagcctgggttccattccctcaccgaggcaggatgc
aggccatgctcctgcgacccttctggcagcaccgacgaatgtaatgttgaaacaggaaga
tgcgtttgcaaagacaacgtcgaaggcttcagctgtgagagatgcaaacctggatttttt
aatctggaatcctccaatcctaagggttgcacaccctgcttctgctttgggcattcttct
gtgtgcaccaatgctgttggctacagtgtttatgacatctcctcgacctttcagattgat
gaggacgggtggcgtgtggagcagagagatggctcggaggcgtctcttgagtggtcctca
gaccggcaggatattgctgtgatctcagacacttacttccccagatactttgtcgcccct
gccaagttcctgggcaaccaggtcctgagttacgggcagaacctctcattctccttccga
gtggacagacgggacactcgcctctccgcagaggatctcgtgctggaaggagctggcttg
agagtatccgtgcccttgatcgctcagggcaactcgtaccctagcgagaccactgtgaag
tacatcttcagactccatgaagcaacagattacccttggaggcctgctctctccccattt
gaatttcagaagctcctaaacaacttgacctctatcaagatccgtggtacatacagtgag
aggagcgctggatatttggatgatgtcaccttgcaaagtgctcgccctgggcccggagtc
cccgcaacgtgggtggagtcctgcacctgtccagtggggtatggagggcagttctgtgag
acatgcctcccaggctacagaagagaaaccccaagtcttggaccttacagcccgtgtgtg
ctctgtacctgtaatgggcacagtgagacctgtgaccccgagacaggtgtctgtgactgc
agagacaatactgccggcccgcactgtgagaaatgtagcgatgggtactatggagactca
accctgggcacctcctctgactgccagccttgtccctgccctggcggctcaagttgtgcc
attgtcccaaagacaaaggaagtggtgtgcacacactgtccaactggcactgccggcaag
agatgtgagctctgtgatgacggctactttggagaccctctgggcagcaatggacccgtg
agactctgccgcccatgtcagtgcaacgacaacatagaccccaacgcagttggcaactgc
aaccgtctgactggagaatgcctgaagtgcatctataacacggctggcttctactgcgac
cggtgcaaagaagggtttttcggaaatcccctggctcccaatccagcagacaagtgcaaa
gcctgcgcctgcaatccctatggtacagtacagcagcagagcagctgtaacccagtgacc
gggcagtgccagtgtctgcctcatgtgtcaggccgggactgtggcgcttgtgaccctggc
ttctacaacctgcagagcgggcaaggctgcgagagttgtgactgccatgctttgggctcc
accaacgggcaatgtgacatccgcaccgggcagtgtgagtgtcagcccggcatcaccggt
cagcactgtgagcgctgtgagaccaaccactttgggtttggacctgaaggctgcaaacct
tgcgactgtcaccacgaaggatccctttcgctccaatgtaaggatgacggccgttgtgaa
tgcagggaaggcttcgtgggcaatcgctgtgaccagtgtgaagagaactatttctacaat
cggtcttggcctggctgccaagagtgtccggcttgttaccggctggtgaaggataaggtt
gctgagcatcgagtgaaactccaggagttggagagcctcatagcaaacctcgggactggg
gatgagacggtgacagatcaagcctttgaggacagactgaaggaagcagagagggaggtt
acagacctcctccgtgaggctcaggaagtcaaagatgtagaccaaaatctgatggatcgc
cttcagagagtaaataacagtctgcacagccaaatcagccggctgcacaatatccggaac
actatagaagagacggggatcttggctgagcgagcgcggtcccgagtggagagcacagag
cagctgattgagatcgcctccagggagctcgagaaagcaaaaatggctgccgccaatgtg
tcaatcactcagccagagtctacaggggaaccaaacaacatgaccctcttggcagaagaa
gcccgaaggcttgcagagcgtcataaacaggaagctgatgacattgtacgagtggcaaag
acagccaacgagacctcagctgaggcatataatctgcttttgaggaccctggcaggagaa
aatcaaactgcattggagattgaagagcttaacaggaagtatgaacaagcaaagaacatc
tctcaggacctggagaagcaggctgccagagtccatgaggaagccaagcgagcaggtgac
aaagccgtggagatctatgccagtgtggcccagctgacccctgtggactcggaggctcta
gagagtgaagcaaataaaatcaagaaagaagctgcagatctggaccgtctgattgaccag
aagctaaaagattacgaggaccttagggaagacatgcgaggaaaggaacatgaagtaaag
aaccttctagagaaggggaaagccgaacagcagaccgctgaccaactcctagctcgagcc
gacgctgccaaggctcttgctgaagaagctgctaaaaagggacgcaataccttacaagaa
gctaacgacattctcaacaacctgaaagattttgatagacgagtgaacgataacaagaca
gctgctgaagaagctctaaggagaattcccgccatcaaccggaccatagctgaagccaat
gagaagacaagggaggcacagctggcgctgggcaatgcagcagctgacgccacggaggcc
aagaacaaagcccacgaggcggagaggattgccagtggcgtgcagaagaatgccaccagt
accaaggcggatgcggagagaaccttctcggaagtgacagacctggataacgaggtgaat
ggcatgttgaggcagctagaggaagcggagaatgagctgaagaggaagcaagatgatgcc
gaccaggacatgatgatggcgggaatggcttcacaggctgctcaggaagctgaacttaat
gccagaaaagccaaaaactctgtcagcagcctcctcagccaactgaccgacctcttggag
cagctgggacagctggacaccgtggacctgaacaagctcaacgagatcgaaggctctctg
aacaaagccaaagacgaaatgaaggtgagcgacctggacaggaaggtgtccaacctggag
aacgaggcccggaagcaggaggcagccatcttggactatgaccgagacatagcagagatc
ataaaggacattcacaacctggaggacatcaagaagacactaccaacaggctgctttaac
accccgtccatcgagaaaccctag

All links

Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   ENSEMBL-RNO (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (3)   
   Pfam (3)   
All databases (27)   

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