KEGG   Rattus norvegicus (rat): 140586
Entry
140586            CDS       T01003                                 
Symbol
Sox9
Name
(RefSeq) transcription factor SOX-9
  KO
K18435  transcription factor SOX9 (SOX group E)
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04024  cAMP signaling pathway
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04024 cAMP signaling pathway
    140586 (Sox9)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    140586 (Sox9)
Transcription factors [BR:rno03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    140586 (Sox9)
SSDB
Motif
Pfam: HMG_box Sox_N HMG_box_2
Other DBs
NCBI-GeneID: 140586
NCBI-ProteinID: NP_536328
RGD: 620474
Ensembl: ENSRNOG00000002607
UniProt: F1LYL9
Position
10:98305744..98311250
AA seq 507 aa
MNLLDPFMKMTDEQEKGLSGAPSPTMSEDSAGSPCPSGSGSDTENTRPQENTFPKGEPDL
KKESEEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK
SVKNGQAEAEEATEQTHISPNAIFKALQADSPHSSSGMSEVHSPGEHSGQSQGPPTPPTT
PKTDVQAGKVDLKREGRPLAEGGRQPPIDFRDVDIGELSSDVISNIETFDVNEFDQYLPP
NGHPGVPATHGQVSYTGSYGISSTAPTPATAGHVWMSKQQAPPPPPQQPPQAPQAPQAPP
QQQAPPQPQQAPQQQQAHTLTTLSSEPGQSQRTHIKTEQLSPSHYSEQQQHSPQQISYSP
FNLPHYNPSYPTITRSQYDYTDHQNSGSYYSHAAGQGSGLYSTFTYMNPAQRPMYTPIAD
TSGVPSIPQTHSPQHWEQPVYTQLTRP
NT seq 1524 nt   +upstreamnt  +downstreamnt
atgaatctcctggaccccttcatgaagatgaccgacgagcaggagaagggcttgtctggc
gcccccagccccaccatgtcggaggactcggctggttcgccctgcccctcgggctcaggc
tccgacacggagaacacacggccccaggagaacacgttccccaagggcgagccggatctg
aagaaggagagcgaggaagataaattcccagtgtgcatccgcgaggcggtcagccaggtg
ctgaagggctacgactggaccctggtgcccatgccggtgcgcgtcaacggctccagcaag
aacaagccacacgtcaagcggcccatgaacgccttcatggtgtgggcgcaggctgcgcgc
aggaagctggcagaccagtacccgcatctgcacaacgcggagctcagcaagactctgggc
aagctctggagactgctgaacgagagcgagaagagacccttcgtggaggaggcggagcgg
ctgcgcgtgcagcacaagaaagaccaccccgattacaagtaccagccccggcggaggaag
tcggtgaagaatgggcaagcagaggccgaagaggccaccgaacagactcacatctctcct
aacgccatcttcaaggcgctgcaagcggactccccgcactcctcctcgggcatgagtgag
gtgcactccccgggcgagcactccgggcaatctcagggtccaccgaccccacccaccact
cccaaaacagacgtgcaagctgggaaagttgatctgaaacgagaggggcgccctctggca
gagggtggcagacagccccccatcgacttccgcgacgtggacatcggtgagctgagcagc
gacgtcatctccaacatcgagaccttcgacgtcaatgagtttgaccaatacctgccgccc
aacggccacccaggggtgccggccacccacggccaggtctcctacactggcagctacggc
atcagcagcaccgcacccactccagcgaccgcgggccacgtgtggatgtcaaagcaacag
gcgccgccccctcctccacagcagcccccacaggctccgcaagccccacaggcgcctccg
cagcagcaagcacccccgcagccgcagcaggcaccccagcagcagcaggcgcacacgctc
accacgctgagcagcgagccaggccagtcccagagaacgcacatcaagacggagcaactg
agcccgagccactacagcgagcagcagcagcactccccgcaacagatctcctacagcccc
ttcaaccttccgcactacaacccctcctacccaaccatcacgcgctcgcagtatgactac
accgaccaccagaactccggctcctactacagccacgcagccggccagggctcggggctc
tactccaccttcacctacatgaacccagcgcagcgccccatgtacacccccatcgctgac
acctccggggtcccttccatcccgcagacccacagccctcagcactgggaacaacccgtc
tacacacagctcaccagaccctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (3)   
   Pfam (3)   
All databases (23)   

Download RDF
DBGET integrated database retrieval system