KEGG R.norvegicus: 170913

Rattus norvegicus (rat): 170913

Entry

170913 CDS R.norvegicus

Gene name Abcb1a

Definition ATP-binding cassette, sub-family B (MDR/TAP), member 1A

Orthology K05658 ATP-binding cassette, subfamily B (MDR/TAP), member 1

Pathway rno02010 ABC transporters

Class Environmental Information Processing; Membrane Transport;
Transporters
Environmental Information Processing; Membrane Transport; ABC
transporters [PATH:rno02010]
Environmental Information Processing; Signaling Molecules and
Interaction; Cellular antigens

SSDB

Motif Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase DUF258 AAA Rad17 AAA_5
Zeta_toxin APS_kinase DUF87 ATP-synt_ab PduV-EutP RNA_helicase
Miro PRK DUF815 Mg_chelatase tRNA_lig_kinase NB-ARC NACHT MobB
VirE DUF265 DNA_pol3_beta IstB
PROSITE: ABC_TRANSPORTER_1 ABC_TRANSPORTER_2 ABC_TM1F

Other DBs NCBI-GI: 25453402
NCBI-GeneID: 170913
RGD: 619951
RATMAP: ENSRNOG00000008012
Ensembl: ENSRNOG00000008012
UniProt: Q9JK64

Position 4q12

AA seq 1272 aa
MELEEDLNGRADKNFSKMGKKSKKEKKEKKPAVSVLTMFRYAGWLDRFYMLLGTLAAIIH
GIALPLMMLVFGDMTDSFANVGNNRSMSFYNATDIYAKLEDEMTTYAYYYTGIGAGVLIV
AYIQVSLWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKINEGIGD
KIGMFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWAKILSSFTDKELQAYA
KAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEEAKRLGIKKAITANISMGAAFLLIYA
SYALAFWYGTSLVISKEYTIGQVLTVFFSVLIGAFSVGQASPNIEAFANARGAAYEVFSI
IDNKPSIDSFSKSGHKPDNIQGNLEFKNIHFSYPSRKDVQILKGLNLKVKSGQTVALVGN
SGCGKSTTVQLLQRLYDPIEGEVSIDGQDIRTINVRYLREIIGVVSQEPVLFATTIAENI
RYGRENVTMDEIEKAVKEANAYDFIMKLPHKFDTLVGERGAQLSGGQKQRIAIARALVRN
PKILLLDEATSALDTESEAVVQAALDKAREGRTTIVIAHRLSTVRNADVIAGFDGGVIVE
QGNHDELMREKGIYFKLVMTQTAGNEIELGNEACESKDGIDNVDMSSKDSGSSLIRRRST
RKSIRGPHDQDGELSTKEALDDDVPPASFWRILKLNSTEWPYFVVGVFCAIINGGLQPAF
SIIFSKVVGVFTKNDTPEIQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRL
RYMVFKSMLRQDISWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVITQNIANLGTGII
ISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGKIATEAIENFRTVV
SLTREQKFETMYAQSLQIPYRNALKKAHVFGITFSFTQAMMYFSYAACFRFGAYLVAREL
MTFENVLLVFSAIVFGAMAVGQVSSFAPDYAKAKVSASHIIRIIEKIPEIDSYSTEGLKP
NMLEGNVKFNGVMFNYPTRPNIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYD
PMAGTVFLDGKEIKQLNVQWLRAHLGIVSQEPILFDCSIAENIAYGDNSRVVSHEEIVKA
AKEANIHQFIDSLPEKYNTRVGDKGTQLSGGQKQRIAIARALVRQPHILLLDEATSALDT
ESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVIQNGQVKEHGTHQQLLAQKGIYF
SMVSVQAGAKRS

NT seq 3819 nt +upstreamnt +downstreamnt
atggagctcgaagaagaccttaacggaagagcagacaagaacttctcaaagatgggcaaa
aagagtaaaaaggagaagaaagaaaagaaaccagcggtcagtgtgctcacaatgtttcgc
tatgcaggttggctggacagattttacatgctgctgggaactctggcggccattatccat
ggaattgcgctcccacttatgatgctggtctttggagacatgacagatagctttgcaaat
gtaggaaacaaccgtagtatgagtttctacaatgctacagacatatatgccaagctggag
gacgaaatgaccacgtacgcctactattacacgggcattggtgccggtgtgctcatcgtt
gcctacatccaggtttcactttggtgcctggcagctgggagacaaatacacaagattagg
cagaagtttttccatgccatcatgaatcaggagataggctggtttgacgtgcatgacgtt
ggggagctcaacacccggctcacagatgacgtctccaaaattaatgaaggaattggtgac
aaaattggaatgttctttcaggcaatggcaacattttttggtggttttataataggattt
actcgcggctggaagctaactcttgtgattttggccatcagccctgttcttggactgtca
gctggtatttgggcaaagatattgtcttcatttactgataaggaactccaggcttatgca
aaagctggagcagttgctgaagaagtcttagcagccatcagaactgtgattgcctttgga
ggacaaaagaaggaacttgaaaggtacaataacaatttggaagaagctaaaaggcttggg
ataaagaaagctatcacggccaacatttccatgggtgcagcttttctgcttatctatgca
tcatatgctctggcattctggtatgggacttccttggtcatctcaaaagaatacactatt
ggacaagtgctcactgtctttttttctgtattaattggagcattcagtgttgggcaggca
tctccaaatattgaagccttcgccaatgctagaggagcagcttatgaagtcttcagtata
attgataataagcccagtatagacagcttctcaaagagtgggcacaaacccgacaacata
caaggaaatttggaattcaaaaatattcacttcagttacccgtctcgaaaagacgttcag
atcttgaagggcctcaacctgaaggtgaagagcgggcagacggtagccctggttggcaac
agtggctgtgggaaaagcacaactgtccagctgctgcagaggctctacgaccccatagag
ggcgaggtcagtatcgacggacaggacatcaggaccatcaatgtgaggtatctgcgggaa
atcattggggtggtgagtcaggaacccgtgctgtttgccaccacaattgccgaaaacatt
cgctatggccgagaaaacgtcaccatggatgagatagagaaagctgtcaaggaagccaat
gcctatgatttcatcatgaaactgccccacaaatttgacaccctggttggtgagagaggg
gcgcagctgagtgggggacagaaacagaggatcgccattgcccgggccctggtccgcaac
cccaagatccttttgttggatgaggccacgtcagccttggacacagaaagcgaagccgtg
gttcaggccgctctggataaggctagagaaggccggaccaccattgtgatagctcaccgc
ttgtctacagttcgcaatgctgacgtcattgctggttttgatggtggtgtcattgtggag
caaggaaatcatgatgagctcatgagagagaaaggaatttacttcaaacttgtcatgact
cagacagcaggaaatgaaattgaattaggaaatgaagcttgtgaatctaaagatggaatt
gataatgtggacatgtcttcaaaagattcaggatccagtctaataagaagaagatcaact
cgcaaaagcatccgtgggccacatgatcaagacggggaacttagcaccaaagaggctctg
gatgacgacgtacctccagcttccttttggcggatcctgaagttgaattcaactgaatgg
ccttattttgtggttggtgtattttgtgccataataaatggaggcttgcaaccagcattc
tccataatattttcaaaggttgtaggggtttttacaaaaaatgacacccctgaaatccag
cggcagaacagcaacttgttttctttattgttcctgatccttgggatcatctctttcatt
acgtttttccttcagggcttcacatttggcaaagctggagagatcctcaccaagcgactc
cgatacatggtcttcaaatccatgctgagacaggacataagctggtttgatgaccctaaa
aacaccacaggagcgctgaccaccaggcttgccaatgacgctgctcaagtgaaaggggct
acagggtctaggcttgctgttattacccagaacatagcaaatcttgggacaggcatcatc
atatccctgatctacggctggcaattgacacttttactcctagcaattgttcccatcatt
gctatagcaggagtggttgaaatgaaaatgttgtctggacaagcgctgaaagataagaag
gaactagaaggttctgggaagatcgctacagaagcaattgaaaactttcgcactgtcgtc
tctttgactcgggagcagaagtttgaaactatgtatgcccagagcttgcagataccatac
agaaatgctttgaagaaagcgcacgtctttgggatcactttctccttcacccaggccatg
atgtatttctcctatgctgcttgtttccggtttggtgcctacttggtggcacgagaactc
atgacatttgaaaatgttctgttagtattctcagctattgtctttggtgccatggcagtg
gggcaggtcagttcattcgctcctgactacgcgaaagccaaagtctcggcatcccacatc
atcaggatcattgagaaaatccctgagattgacagctacagcacggagggcttgaagcct
aatatgttggaaggaaatgtgaaatttaatggagtcatgttcaactatcccacccgaccc
aacatcccagtgcttcaggggctgagcctagaggtgaagaaagggcagacgctggccctc
gtgggcagcagtggctgcgggaagagtacagtggtccagctgcttgagcgcttctatgac
cccatggccggaacagtgtttctagatggcaaagaaataaagcaactcaatgtccagtgg
ctccgcgcccacctgggcattgtgtcccaggagcccatcctgtttgactgcagcatcgcc
gagaacattgcctacggagacaacagccgtgtcgtgtctcatgaggagatcgtgaaggca
gccaaggaggccaacatccaccagttcatcgactcactgcctgagaaatacaacaccaga
gtgggagacaaagggactcagctgtcgggcgggcagaagcagcgcatcgccatcgcgcgc
gccctcgtcagacagcctcacatcttacttctggatgaagcgacatcagctctggatacg
gagagtgaaaaggtcgtccaggaagcgctggacaaagccagggaaggccgcacctgcatt
gtgatcgcgcaccgcctgtccaccatccagaacgcagacttgatcgtggtgattcagaac
ggccaggtcaaggagcacggcacccaccagcagctgctggcccagaaaggcatctatttc
tcgatggtcagtgtgcaggctggagcaaagcgctcatga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   UNIGENE (1)   
   ENSEMBL-RNO (1)   
   RATMAP-RNO (1)   
   RGD-RNO (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (1)   
   IPI (3)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (29)   
   Pfam (26)   
   PROSITE (3)   
All databases (50)

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