KEGG   Rattus norvegicus (rat): 24225Help
Entry
24225             CDS       T01003                                 

Gene name
Bdnf
Definition
(RefSeq) brain-derived neurotrophic factor
  KO
K04355  
brain-derived neurotrophic factor
Organism
rno  Rattus norvegicus (rat)
Pathway
MAPK signaling pathway
cAMP signaling pathway
Neurotrophin signaling pathway
Huntington's disease
Cocaine addiction
Alcoholism
Brite
KEGG Orthology (KO) [BR:rno00001]
 Environmental Information Processing
  Signal transduction
   04010 MAPK signaling pathway
    24225 (Bdnf)
   04024 cAMP signaling pathway
    24225 (Bdnf)
 Organismal Systems
  Nervous system
   04722 Neurotrophin signaling pathway
    24225 (Bdnf)
 Human Diseases
  Neurodegenerative diseases
   05016 Huntington's disease
    24225 (Bdnf)
  Substance dependence
   05030 Cocaine addiction
    24225 (Bdnf)
   05034 Alcoholism
    24225 (Bdnf)
Cytokines [BR:rno04052]
 PDGF family
  Cysteine-knot growth factors
   Subclass II
    24225 (Bdnf)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif
Pfam: 
Motif
Other DBs
NCBI-ProteinID: 
NCBI-GeneID: 
RGD: 
Ensembl: 
UniProt: 
Position
3q33
AA seq 249 aa AA seqDB search
MTILFLTMVISYFGCMKAAPMKEANVHGQGNLAYPAVRTHGTLESVNGPRAGSRGLTTTS
LADTFEHVIEELLDEDQKVRPNEENHKDADLYTSRVMLSSQVPLEPPLLFLLEEYKNYLD
AANMSMRVRRHSDPARRGELSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLK
QYFYETKCNPMGYTKEGCRGIDKRHWNSQCRTTQSYVRALTMDSKKRIGWRFIRIDTSCV
CTLTIKRGR
NT seq 750 nt NT seq  +upstreamnt  +downstreamnt
atgaccatccttttccttactatggttatttcatacttcggttgcatgaaggctgcgccc
atgaaagaagcaaacgtccacggacaaggcaacttggcctacccagctgtgcggacccat
gggactctggagagcgtgaatgggcccagggcaggttcgagaggtctgacgacgacgtcc
ctggctgacacttttgagcacgtgatcgaagagctgctggatgaggaccagaaggttcgg
cccaacgaagaaaaccataaggacgcggacttgtacacttcccgggtgatgctcagcagt
caagtgcctttggagcctcctctgctctttctgctggaggaatacaaaaattacctggat
gccgcaaacatgtctatgagggttcggcgccactccgaccccgcccgccgtggggagctg
agcgtgtgtgacagtattagcgagtgggtcacagcggcagataaaaagactgcagtggac
atgtccggtgggacggtcacagtcctggagaaagtcccggtatcaaaaggccaactgaag
caatatttctacgagaccaagtgtaatcccatgggttacacgaaggaaggctgcaggggc
atagacaaaaggcactggaactcgcaatgccgaactacccaatcgtatgttcgggccctt
actatggatagcaaaaagagaattggctggcggttcataaggatagacacttcctgtgta
tgtacactgaccattaaaaggggaagatag

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