KEGG   Rattus norvegicus (rat): 25271Help
Entry
25271             CDS       T01003                                 

Gene name
Rxra
Definition
retinoid X receptor alpha
Orthology
K08524  
retinoid X receptor alpha
Organism
rno  Rattus norvegicus (rat)
Pathway
PPAR signaling pathway
PI3K-Akt signaling pathway
Thyroid hormone signaling pathway
Adipocytokine signaling pathway
Non-alcoholic fatty liver disease (NAFLD)
Bile secretion
Hepatitis C
Pathways in cancer
Transcriptional misregulation in cancer
Thyroid cancer
Small cell lung cancer
Non-small cell lung cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 Environmental Information Processing
  Signal transduction
   04151 PI3K-Akt signaling pathway
    25271 (Rxra)
 Organismal Systems
  Endocrine system
   04920 Adipocytokine signaling pathway
    25271 (Rxra)
   03320 PPAR signaling pathway
    25271 (Rxra)
   04919 Thyroid hormone signaling pathway
    25271 (Rxra)
  Digestive system
   04976 Bile secretion
    25271 (Rxra)
 Human Diseases
  Cancers
   05200 Pathways in cancer
    25271 (Rxra)
   05202 Transcriptional misregulation in cancers
    25271 (Rxra)
   05216 Thyroid cancer
    25271 (Rxra)
   05222 Small cell lung cancer
    25271 (Rxra)
   05223 Non-small cell lung cancer
    25271 (Rxra)
  Endocrine and metabolic diseases
   04932 Non-alcoholic fatty liver disease (NAFLD)
    25271 (Rxra)
  Infectious diseases
   05160 Hepatitis C
    25271 (Rxra)
Transcription factors [BR:rno03000]
 Eukaryotic Type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    25271 (Rxra)
Nuclear receptors [BR:rno03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   25271 (Rxra)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
RGD: 
Ensembl: 
UniProt: 
Position
3p12
AA seq 467 aa AA seqDB search
MDTKHFLPLDFSTQVNSSSLSSPTGRGSMAAPSLHPSLGPGLGSPLGSPGQLHSPISTLS
SPINGMGPPFSVISSPMGPHSMSVPTTPTLGFGTGSPQLNSPMNPVSSSEDIKPPLGLNG
VLKVPAHPSGNMSSFTKHICAICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDNK
DCLIDKRQRNRCQYCRYQKCLAMGMKREAVQEERQRGKDRNENEVESTSSANEDMPVEKI
LEAELAVEPKTETYVEANMGLNPSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLD
DQVILLRAGWNELLIASFSHRSIAVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVS
KMRDMQMDKTELGCLRAIVLFNPDSKGLSNPAEVEALREKVYASLEAYCKHKYPEQPGRF
AKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQTT
NT seq 1404 nt NT seq  +upstreamnt  +downstreamnt
atggacaccaaacatttcctgccgctcgacttctctacccaggtgaactcttcatccctg
agctctccaacgggtcgaggctccatggctgccccctcgctgcacccttccctgggtcca
ggactcggctctcctctgggctcccctgggcagctgcactcgcctatcagcaccctgagt
tctcccatcaatggcatgggcccacccttctcggtcatcagctccccgatgggcccgcac
tccatgtcggtacccaccacacccacactgggcttcgggactggcagcccccagctcaac
tcacccatgaaccccgtgagcagcagtgaggatatcaaaccccctctaggcctcaatggc
gtcctcaaggttcctgcccacccctcaggaaatatgtcatccttcaccaagcacatctgc
gctatctgtggggaccgctcctcaggcaaacactatggggtctacagctgtgagggctgc
aagggcttcttcaagaggacagtacgcaaagacctgacctacacctgccgtgacaacaag
gactgcctgatcgacaagagacagcggaaccggtgtcagtactgccgataccagaagtgc
ctggccatgggcatgaagcgggaagccgtgcaggaggagcggcagcgaggcaaggaccgg
aacgagaatgaggtggagtccaccagcagtgccaacgaggacatgcctgtagagaagatt
ctggaagctgagctcgctgttgagcccaagactgagacatacgtggaggcaaacatgggg
ctgaaccccagctcaccaaatgaccctgttaccaacatctgtcaagcagcagacaagcag
ctcttcactcttgtggagtgggccaagaggatcccacacttttctgagctgcccctggac
gaccaggtcatcctcctccgggcaggctggaacgagctgctgattgcctccttctcccac
cgctccatagctgtgaaagacggcatcctcctggccaccggcctgcacgtacacaggaac
agcgctcacagtgctggggtgggcgccatctttgacagggtgctaacggagctggtgtcg
aagatgcgtgacatgcagatggacaagacggagctgggctgcttgcgcgccattgtcctc
ttcaaccctgactctaaggggctctcaaaccctgctgaggtggaggcgctgagggagaag
gtgtatgcatcactagaagcgtactgcaaacacaagtaccctgagcagccgggcaggttt
gccaagctgctgctccggctgcctgcactgcgatccattgggctcaagtgcctggagcac
ctgttcttcttcaagctcatcggggatacacccatcgacactttcctcatggagatgctg
gaggccccacatcaaaccacctag

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