KEGG   Rattus norvegicus (rat): 25304Help
Entry
25304             CDS       T01003                                 

Gene name
Comp
Definition
cartilage oligomeric matrix protein
Orthology
K04659  
thrombospondin 2/3/4/5
Organism
rno  Rattus norvegicus (rat)
Pathway
Phagosome
PI3K-Akt signaling pathway
Focal adhesion
ECM-receptor interaction
Malaria
Class
Environmental Information Processing; Signal transduction; PI3K-Akt signaling pathway [PATH:rno04151]
Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:rno04512]
Cellular Processes; Transport and catabolism; Phagosome [PATH:rno04145]
Cellular Processes; Cell communication; Focal adhesion [PATH:rno04510]
Human Diseases; Infectious diseases; Malaria [PATH:rno05144]
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
RGD: 
Ensembl: 
UniProt: 
Structure
PDB: 

Jmol
Position
16
AA seq 755 aa AA seqDB search
MSPTACVLVLALAALRATGQGQIPLGGDLAPQMLRELQETNAALQDVRELLRHRVKEITF
LKNTVMECDACGMQPARTPGLSVRPVALCAPGSCFPGVVCTETATGARCGPCPPGYTGNG
SHCTDVNECNAHPCFPRVRCINTSPGFHCEACPPGFSGPTHEGVGLTFAKTNKQVCTDIN
ECETGQHNCVPNSVCVNTRGSFQCGPCQPGFVGDQRSGCQRRGQHFCPDGSPSPCHEKAD
CILERDGSRSCVCAVGWAGNGLLCGRDTDLDGFPDEKLRCSERQCRKDNCVTVPNSGQED
VDRDRIGDACDPDADGDGVPNEQDNCPLVRNPDQRNSDKDKWGDACDNCRSQKNDDQKDT
DRDGQGDACDDDIDGDRIRNVADNCPRVPNFDQSDSDGDGVGDACDNCPQKDNPDQRDVD
HDFVGDACDSDQDQDGDGHQDSRDNCPTVPNSAQQDSDHDGKGDACDDDDDNDGVPDSRD
NCRLVPNPGQEDNDRDGVGDACQGDFDADKVIDKIDVCPENAEVTLTDFRAFQTVVLDPE
GDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTFHVNTATDDDYAGFIFG
YQDSSSFYVVMWKQMEQTYWQANPFRAVAEPGIQLKAVKSSTGPGEQLRNALWHTGDTAS
QVRLLWKDPRNVGWKDKTSYRWFLQHRPQVGYIRVRFYEGPELVADSNVVLDTAMRGGRL
GVFCFSQENIIWANLRYRCNDTIPEDYERHRLRRA
NT seq 2268 nt NT seq  +upstreamnt  +downstreamnt
atgagccccactgcctgcgttctagtgctcgccctggctgccttgcgggctaccggccag
ggccagatcccgctgggtggagacctagccccacagatgcttcgagaactccaggagact
aatgcggcgctgcaagacgtgagagagctcttgcgacacagggtcaaggagatcaccttc
ctgaagaatacggtgatggaatgtgacgcttgcggaatgcagcccgcacgcacccccggt
ctgagcgtgcggccagtcgcgctctgcgcacccggctcctgcttccctggcgtagtctgc
acggagacagctaccggcgcgcgctgcggcccctgccctccgggctacaccggcaacggc
tcgcactgcaccgacgttaatgagtgcaacgctcacccctgtttcccgcgcgtgcggtgc
atcaataccagccctggctttcactgcgaagcctgtccccctgggttcagcgggcccacc
cacgagggtgtggggctgaccttcgccaagaccaacaaacaagtttgcacagatattaat
gagtgtgagaccgggcagcacaattgcgttcccaactccgtgtgcgtcaacacccggggc
tccttccagtgcggtccctgccagcccggcttcgtgggcgaccagaggtcaggctgccag
cggcgtgggcaacacttctgccccgacgggtcacccagcccgtgccatgagaaagcagac
tgtattttggagcgcgacggctcaaggtcctgcgtgtgtgcggtcggctgggccggcaac
gggctcctgtgcggacgcgacacagacctggacggtttcccggacgagaagcttcgctgc
tcagagcgccagtgccgcaaggacaactgcgtgacggtgcccaattcagggcaggaggat
gtggaccgggaccgcattggagatgcttgtgacccggatgcggacggggatggagtccct
aatgagcaagacaattgcccgctggttcgaaacccagaccagcgcaactccgataaagac
aagtggggagatgcctgcgacaactgccggtcccagaagaatgatgaccagaaagataca
gaccgggatggccagggcgatgcctgcgacgacgacatagatggcgatcgaatccgaaat
gtagctgacaactgtccccgggtgcccaactttgaccagagtgacagcgatggtgatggt
gttggggatgcctgtgacaattgtccccagaaagacaacccggaccagagggacgtggac
cacgactttgtgggtgatgcctgtgacagtgaccaagaccaggacggggatggacaccaa
gactcccgggacaactgccccacagtgcccaacagtgcccagcaggactcagaccatgat
ggcaagggtgatgcctgtgatgatgacgacgacaatgacggagtccctgacagccgggac
aattgccgcttggtgcccaacccgggccaagaggacaatgaccgggatggcgtgggtgac
gcttgtcagggtgacttcgatgctgacaaggttatagacaagatcgatgtgtgccccgag
aacgccgaggtcactctcaccgacttcagggccttccaaacagttgtgctggaccccgag
ggtgatgcgcagatcgaccccaactgggtggtgctcaatcagggaatggagatcgttcag
accatgaacagtgaccctggcctggctgtgggttacacggcattcaacggtgtagatttt
gagggaacgttccatgtaaacaccgccaccgatgatgactacgctggcttcatcttcggc
tatcaagacagctcaagtttctatgtggtcatgtggaaacagatggagcagacgtactgg
caggccaatcctttccgggcagtggctgaaccagggattcagctcaaggctgtcaagtcc
tctacaggtcccggggaacagctccgaaatgcgttgtggcacacgggggacacagcatcc
caggtgcggctgctgtggaaggatcctcgaaatgtgggctggaaggataagacatcctac
cgctggttcctgcagcaccggcctcaagtcggctacatcagggtgcggttctatgagggt
cctgagctagtagctgacagcaacgtggtgctggacacagctatgcgtggtggccgcctg
ggtgtcttctgcttctcccaagagaatatcatctgggctaacctgcgctaccgttgcaat
gatacaatccctgaggactatgagcgtcaccggctgcggagggcctag

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