KEGG   Rattus norvegicus (rat): 287765
Entry
287765            CDS       T01003                                 
Symbol
Ddx5
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
rno  Rattus norvegicus (rat)
Pathway
rno03040  Spliceosome
rno05202  Transcriptional misregulation in cancer
rno05205  Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    287765 (Ddx5)
 09160 Human Diseases
  09161 Cancer: overview
   05202 Transcriptional misregulation in cancer
    287765 (Ddx5)
   05205 Proteoglycans in cancer
    287765 (Ddx5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:rno03041]
    287765 (Ddx5)
   03009 Ribosome biogenesis [BR:rno03009]
    287765 (Ddx5)
Enzymes [BR:rno01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     287765 (Ddx5)
Spliceosome [BR:rno03041]
 Complex A
  U1 snRNP components
   U1 related factors
    287765 (Ddx5)
 Complex B
    287765 (Ddx5)
Ribosome biogenesis [BR:rno03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    287765 (Ddx5)
SSDB
Motif
Pfam: DEAD Helicase_C P68HR ResIII Helicase_C_2 ERCC3_RAD25_C BNIP2
Other DBs
NCBI-GeneID: 287765
NCBI-ProteinID: NP_001007614
RGD: 619906
Ensembl: ENSRNOG00000030680
UniProt: F7F4F8 Q6AYI1
Position
10:complement(92224393..92231928)
AA seq 615 aa
MSSYSSDRDRGRDRGFGAPRFGGSRTGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQEVDTYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAANY
TNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGSNVANMHNGMNQQAYAYPATAA
AAPMIGYPMPTGYSQ
NT seq 1848 nt   +upstreamnt  +downstreamnt
atgtcgagttattctagtgaccgagaccgcggccgggatcgagggtttggtgcacctcga
tttggagggagtagaacaggacccctatctggaaagaagtttggaaatcctggggagaaa
ctagttaaaaagaagtggaatcttgatgagctgcccaaatttgagaagaatttttatcag
gaacaccctgatttggcaaggcgcaccgcacaagaggtagatacgtacagaagaagcaag
gaaattacagtcagaggtcacaactgtccaaaacctgttctgaatttttatgaagcaaac
tttcctgcaaatgtcatggatgtgattgcaaggcagaacttcactgaacccactgctatc
caagctcagggctggccagttgctctcagtggattggatatggttggagtagctcagact
ggatctgggaaaacattatcttatttgctgcctgccattgtacacataaaccaccagcca
ttcttagagagaggtgatgggcctatttgcttggtgctggcaccaactcgagaactggca
cagcaggtgcagcaggtcgctgctgaatattgtagagcttgtcgcttgaagtctacttgc
atctatggtggtgctcccaaaggaccgcagattcgtgatttggagagaggtgtggaaatc
tgtattgcaacacctggaagactgattgactttttagagtgtgggaaaaccaatctgaga
agaacaacttaccttgtccttgatgaagctgataggatgcttgatatgggctttgaaccc
caaataaggaaaattgtggatcaaataagacctgataggcaaacactaatgtggagtgca
acttggccaaaagaagtaagacagcttgctgaagatttcctgaaagactatattcatatc
aatattggtgcactggaactgagtgcaaaccataacattcttcagattgtggatgtgtgt
catgatgtcgaaaaggatgaaaaacttattcgtctgatggaagagatcatgagtgagaag
gagaataaaaccattgtttttgttgaaaccaaaagaagatgtgatgaacttaccagaaaa
atgaggagagatgggtggcctgccatgggcatccatggtgacaagagtcaacaggaacga
gactgggttctaaatgaattcaaacatggaaaagctcctattctgattgctaccgatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttactcccaataacataaagcaagtgagcgacctcatctctgtgctt
cgggaagccaatcaagcaattaatcccaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgatcgtcgtgacagatactctgcaggg
aaaaggggtggatttaatacctttagagacagggaaaactatgacagaggctactctagt
ctgcttaagagagattttggggctaaaactcagaatggtgtttacagtgctgcaaattac
accaatgggagctttggaagtaattttgtatctgctggcatacagaccagttttaggact
ggtaacccaacagggacttaccagaacggttatgatagcactcagcaatatggaagtaat
gttgcaaatatgcacaatgggatgaaccaacaggcatatgcatatcctgctaccgcagct
gctgcgcctatgattggctatccaatgccaacagggtattctcaataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (4)   
   UniProt (2)   
   RefSeq(pep) (2)   
DNA sequence (12)   
   RefSeq(nuc) (2)   
   GenBank (5)   
   EMBL (5)   
Protein domain (7)   
   Pfam (7)   
All databases (37)   

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