KEGG   Rattus norvegicus (rat): 29300
Entry
29300             CDS       T01003                                 
Symbol
Gata6
Name
(RefSeq) transcription factor GATA-6
  KO
K17897  GATA-binding protein 6
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    29300 (Gata6)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Cys4 GATA-factors
    29300 (Gata6)
SSDB
Motif
Pfam: GATA-N GATA TF_Zn_Ribbon Prim_Zn_Ribbon
Other DBs
NCBI-GeneID: 29300
NCBI-ProteinID: NP_062058
RGD: 2666
Ensembl: ENSRNOG00000023433
UniProt: P46153
Position
18:2460909..2492322
AA seq 587 aa
MALTDGGWCLPKRFGAAAADAGDSGPFPAREPSSPLSPISSSSSSCSRGGDRGPCGASNC
RTPQLDTEAVAGPPGRSLLLSPYTSHPFAAAHGAAAPGVAGPGSALSTWEDLLLFTDLDQ
AATASKLLWSSRGAKLSPFAAEQPEEMYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAAA
AAASSPVYVPTTRVGSMLPGLPYLQGAGSGPSNHAGGAGAHPGWPQASADSPPYGGGGAA
GGGAAGPGGAGSATAHASARFPYSPSPPMANGAARDPGGYVAAGGAGAGSVSGGGGSLAA
MGGREHQYSSLSAARPLNGTYHHHHHHHPTYSPYMGAPLTPAWPAGPFETPVLHSLQSRA
GAPLPVPRGPSADLLEDLSESRECVNCGSIQTPLWRRDGTGHYLCNACGLYSKMNGLSRP
LIKPQKRVPSSRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMKKE
GIQTRKRKPKNINKSKACSGNSSVPMTPTSSSSNSDDCTKNTSPPTQSTASGVGASVMSA
VGESANPENSDLKYSGQDGLYIGVSLSSPAEVTSSVRQDSWCALALA
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggccttgactgacggcggctggtgcctgccgaagcgtttcggggctgctgctgcggac
gccggcgactctgggccctttccagcgcgggagccctcctcgccgctctcccccatctcg
tcctcttcctcctcctgctcccggggtggggatcgtggtccctgcggcgccagcaactgc
aggacgccgcagctcgacactgaggcggtggcgggacctccgggccgctcgctcttgctc
agcccctacacttcccatcccttcgccgctgctcacggagccgcggcgcccggggtcgct
ggccccgggagcgccctgtcgacttgggaggacctgttgctcttcactgacctcgatcag
gccgcgaccgccagcaagctgctgtggtccagccggggcgccaagctgagtcccttcgcg
gccgagcagccggaggaaatgtaccagacgctcgccgctctgtccagccaggggcccgcc
gcttacgacggcgcgcccggcggcttcgtacactccgcagctgcggcggccgcggcggcc
gcggcagccagctctccggtctacgtgcccaccacacgcgtgggctccatgctgcccggc
ctgccttacctgcagggggcgggcagcgggcccagcaatcacgcgggcggcgcgggcgcc
cacccgggctggccccaggcctccgccgacagccccccgtatggcgggggtggtgcagcg
ggcggcggcgcggccggacccggaggtgcgggatcagccacagcccacgcctctgcacgc
ttcccctactcgcccagcccgcccatggccaacggcgccgcgcgggaccccgggggctac
gtggctgcgggcggcgcgggcgcgggtagcgtgagtggcggtggcggcagcctggcggcc
atgggtggccgggagcaccagtacagctcgctgtccgcagccaggccgctgaacgggacg
taccaccaccaccatcatcaccacccgacctactcgccctacatgggcgctcctctgact
cccgcctggccagcgggacccttcgaaacgccggtgctccacagtttacagagccgcgcg
ggagctccactcccggtgccacgaggccccagcgcagacctgttggaggacctgtcggag
agccgcgagtgcgtgaactgtggctccatccagacgccactgtggagacgagatggcacc
ggtcattacctgtgcaacgcatgcggtctctacagtaagatgaacggcctcagcaggccc
ctcatcaagccacagaagcgcgtgccttcatcacgacggcttggactgtcctgtgccaac
tgtcacaccacaaccactaccttatggcgtagaaacgctgagggtgagcccgtgtgcaat
gcttgcgggctttatatgaaactccatggggtgcctcgaccacttgctatgaaaaaagaa
ggaattcaaaccaggaaacgaaaacctaaaaatataaataagtcgaaagcttgctccggt
aacagctctgttcctatgactccaacttcctcctcctctaattcagatgactgcaccaaa
aatacttctcctcccacacagtcgactgcctcaggggtgggtgcatcagtgatgtctgca
gtgggagaaagtgccaaccctgagaacagtgacctcaagtattcaggtcaagatggcctc
tacataggtgtcagtttgtcctcccctgccgaagttacatcctcggtgcgacaggattct
tggtgtgctctggccctggcctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (9)   
   RefSeq(nuc) (1)   
   GenBank (4)   
   EMBL (4)   
Protein domain (4)   
   Pfam (4)   
All databases (25)   

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