KEGG   Rattus norvegicus (rat): 294236Help
Entry
294236            CDS       T01003                                 

Gene name
Gtf2h4
Definition
general transcription factor II H, polypeptide 4
Orthology
K03144  
transcription initiation factor TFIIH subunit 4
Organism
rno  Rattus norvegicus (rat)
Pathway
Basal transcription factors
Nucleotide excision repair
Viral carcinogenesis
Module
Holo-TFIIH complex
Brite
KEGG Orthology (KO) [BR:rno00001]
 Genetic Information Processing
  Transcription
   03022 Basal transcription factors
    294236 (Gtf2h4)
  Replication and repair
   03420 Nucleotide excision repair
    294236 (Gtf2h4)
 Human Diseases
  Cancers
   05203 Viral carcinogenesis
    294236 (Gtf2h4)
Transcription machinery [BR:rno03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     294236 (Gtf2h4)
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
RGD: 
Ensembl: 
UniProt: 
Position
20p12
AA seq 463 aa AA seqDB search
MEITPARGGLNRAHLQCRNLQEFLGGLSPGVLDRLYGHPATCLAVFRELPSLAKNWVMRM
LFLEQPLPQAAVALWVKKEFSKAQEESTGLLSGLRIWHTQLLPGGLQGLILNPVFRQNLR
IALLGGGKAWSDDTSQLGPDKHARDVPSLDKYAEERWEVVLHFMVGSPSAAVSQDLAQLL
SQAGLMKSTEPGEPPCITSAGFQFLLLDTPAQLWYFMLQYLQTAQSRGMDLVEILSFLFQ
LSFSTLGKDYSVEGMSDSLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGVSGAGG
TVHQPGFIVVETNYRLYAYTESELQIALIALFSEMLYRFPNMVVAQVTRESVQQAIASGI
TAQQIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFTEGVLYNQFLSQVDFE
LLLAHARELGVLVFENSAKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq 1392 nt NT seq  +upstreamnt  +downstreamnt
atggagatcacccccgcgaggggtggactgaaccgagcacacctacaatgcaggaatcta
caggagttcttaggcggcctgagccctggggtgctggaccgattgtatggacaccctgcc
acttgtctggctgtcttcagggagctcccttccttggctaagaactgggtgatgagaatg
ctctttctggagcagcctctaccacaggctgccgtggccctgtgggtgaagaaggagttc
agcaaggctcaggaggaaagtaccgggctgttgagtggcctccgtatttggcatacccag
ctgctccccggtggactccagggcctcatcttgaaccctgtcttccgccagaacctccga
attgctcttctgggtgggggcaaggcctggtctgatgacacaagtcagctgggaccagac
aagcacgcccgggatgtcccctcacttgataagtacgccgaggagcgctgggaggtggtc
ttgcatttcatggtgggctcccccagtgcagctgtcagccaggacctggctcaactcctc
agccaggccgggcttatgaaaagcaccgaacccggagagccaccgtgtatcacttccgct
ggcttccagttcctgctcctagacacgcctgcccagctctggtacttcatgctgcagtat
ctgcagacagcccagagtcggggcatggatctagtggagattctctccttccttttccag
ctcagtttctctactcttggcaaggactactccgtggaggggatgagtgattctttgttg
aacttcctgcaacacctgcgtgaattcgggcttgttttccagaggaagaggaagtcccgg
cgttactaccccacacgcctggccatcaacctctcatctggtgtctccggggctgggggc
actgtgcaccagcctggcttcattgtcgtcgaaaccaattacagactgtatgcctatacc
gagtcggagctgcagatcgccctcattgctcttttctccgagatgctctatcgattcccc
aacatggtggtggcacaagtgacccgggagagcgtgcagcaggccatcgccagtggcatc
actgcccagcagattatccatttcctaaggaccagggcccatccagtgatgctcaaacag
actcctgtgctgccccccaccataacagaccagattcggctgtgggagctggaaagggac
agacttcggttcactgaaggcgttctgtacaaccagttcctatcgcaagtggactttgaa
ttgctgctggcccacgcgcgggagctgggcgtgctcgtgttcgagaactcggccaagcgg
ctgatggtggtgacaccggcggggcacagcgacgtcaagcgcttctggaagcggcagaag
cacagctcctga

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