KEGG   Rattus norvegicus (rat): 296789
Entry
296789            CDS       T01003                                 
Symbol
Sema3e
Name
(RefSeq) semaphorin-3E precursor
  KO
K06840  semaphorin 3
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04360  Axon guidance
Brite
KEGG Orthology (KO) [BR:rno00001]
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    296789 (Sema3e)
SSDB
Motif
Pfam: Sema ig Ig_6 V-set PSI Ig_3 Ig_2 I-set
Other DBs
NCBI-GeneID: 296789
NCBI-ProteinID: NP_001100049
RGD: 1310973
Ensembl: ENSRNOG00000006631
UniProt: A6K5F8 D3Z8E2
Position
4:complement(21252686..21510449)
AA seq 775 aa
MAPTGHILTLLLWGHLLELWTPGYTANPSYPRLRLSHKELLELNRTSIFQSPFGFLDLHT
MLLDEYQERLFVGGRDLVYSLNLERVSDGYREIYWPSTAVKVEECIMKGKDANECANYVR
VLHHYNRTHLLTCATGAFDPHCAFIRVGHHSEDPLFHLESHRSERGRGRCPFDPNSSFVS
TLVGNELFAGLYSDYWGRDSAIFRSLGKLGHIRTEHDDERLLKEPKFVGSYMIPDNEDPE
DNKMYFFFTEKALEAENNAHTIYTRVGRLCVNDMGGQRILVNKWSTFLKARLVCSVPGMN
GIDTHFDELEDVFLLPTRDPKNPVIFGLFNTTSNIFRGHAVCVYHMSSIREAFNGPYAHK
EGPEYHWSLYEGKVPYPRPGSCASKVNGGKYGSTKDYPDDAIRFARMHPLMYQPIKPVHK
KPILVKTDGKYNLRQLAVDRVEAEDGQYDVLFIGTDTGIVLKVITIYNQETEWMEEVILE
ELQIFKDPAPIISMEISSKRQQLYIGSASAVAQVRFHHCDMYGSACADCCLARDPYCAWD
GISCSRYYPTGAHSKRRFRRQDVRHGNAAQQCFGQQFVGDALDRTEERLAYGIESNSTLL
ECTPRSLQAKVVWFVQKGRDVRKEEVKTDDRVVKMDLGLLFLRVRKSDAGTYFCQTVEHS
FVHTVRKITLEVVEEHKVEGMFHKDREEEKHHKMPCPPLTGMSQGTKPWYKEFLQLIGYS
NFQRVEEYCEKVWCTDKKRKKLKMSPSKWKYANPQEKRLRSKAEHFRLPRHTLVS
NT seq 2328 nt   +upstreamnt  +downstreamnt
atggcaccgaccggacacatcctcaccttgctgctctggggtcacctgctggagctctgg
accccaggttacactgcgaacccctcctatcccaggctacgactgtctcataaagaactc
ttggaactgaacaggacgtcaatatttcaaagcccctttggttttcttgatctccacaca
atgctgctggatgagtatcaagaacggctctttgtgggaggcagagaccttgtctattcc
ctgaacttggaacgcgtcagtgatggctacagagagatatactggcctagcacagcagta
aaagtagaagaatgcataatgaaaggaaaagacgcaaatgagtgtgccaattatgtccgg
gttttgcatcactacaacaggacacaccttctgacctgtgctacgggagcctttgatcca
cactgtgcctttatccgagtcgggcaccattcagaggaccccctgtttcacctggagtca
cacagatctgagagaggaaggggcagatgtccttttgaccccaactcctcctttgtgtcc
acactagttggtaatgaactgtttgctgggctctacagtgactactggggccgagactca
gcgatcttccgcagcctggggaagctcggccatatccgcaccgagcatgacgatgagcgg
ctgctgaaagaaccaaaatttgtaggttcatatatgattcctgataacgaagacccagag
gacaacaaaatgtacttcttcttcactgagaaggcattggaggcagagaacaatgcccac
acgatctacacccgagtggggcggctgtgcgtgaatgacatgggaggacagagaatcctg
gtgaataagtggagcacattcctcaaagcacggctggtttgctcagtaccagggatgaat
ggaattgacacacactttgacgaattagaggatgtgtttttactgcctacccgagatccc
aagaatccagtgatatttggactatttaatactaccagcaatatttttagaggccatgct
gtatgtgtgtatcacatgtcaagtatccgggaagcctttaatggcccatatgcacataaa
gaaggccctgaatatcactggtcactgtatgaaggaaaggtcccctacccaaggcctggt
tcttgtgccagcaaagtgaatggaggaaagtacggatccaccaaagactaccctgacgac
gccatccgattcgcaaggatgcatccactaatgtatcagcccataaaacctgtccataaa
aaaccaatactggtaaaaacggatggaaaatataacctgaggcaactagcagtggaccga
gtggaagcggaggatggccagtatgacgttttatttattggaacagacacaggaatcgtg
ctgaaagtaatcacaatttacaaccaagaaacagagtggatggaggaagtcattctggag
gaacttcaaatattcaaggatccagcccctatcatttctatggagatttcttcaaagagg
caacagctctatattgggtcagcctctgctgtggcacaagtcagattccatcactgtgac
atgtacggcagcgcctgtgctgactgctgcctggctcgagacccttactgtgcctgggat
ggtatctcctgctccaggtactacccgacaggtgcacactcaaagaggagattccgcagg
caggatgttcggcacggcaacgccgcccagcagtgctttgggcagcaatttgtgggagac
gctttggataggactgaagagaggctggcttatggcatagagagcaacagtactttgctg
gaatgcaccccacgatcactacaagcaaaagttgtctggtttgtacagaagggacgcgac
gtaagaaaggaagaggtaaagacggatgacagagttgttaagatggacttgggcttgctc
ttcctcagagtccgcaagtcggatgcagggacctacttttgccaaacggtagaacatagc
ttcgtccacactgtgcgcaaaatcaccttggaggtggtcgaagagcataaagtggagggg
atgtttcataaggaccgcgaagaggaaaaacatcacaagatgccctgccctcccttaact
ggtatgtctcaggggacaaaaccctggtacaaggaattcttgcagctgattggctacagc
aacttccagagagtggaagaatactgcgaaaaggtgtggtgtacagataagaagaggaaa
aagctgaaaatgtctccctccaagtggaagtatgccaacccccaggaaaagaggcttcgc
tccaaagctgagcatttccgcctgcccaggcacacgctggtctcttga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (2)   
   RefSeq(pep) (3)   
DNA sequence (5)   
   RefSeq(nuc) (3)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (27)   

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