KEGG   Rattus norvegicus (rat): 298941
Entry
298941            CDS       T01003                                 
Symbol
Lamb1
Name
(RefSeq) laminin subunit beta-1 precursor
  KO
K05636  laminin, beta 1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04151  PI3K-Akt signaling pathway
rno04510  Focal adhesion
rno04512  ECM-receptor interaction
rno05145  Toxoplasmosis
rno05146  Amoebiasis
rno05165  Human papillomavirus infection
rno05200  Pathways in cancer
rno05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:rno00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    298941 (Lamb1)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    298941 (Lamb1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    298941 (Lamb1)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    298941 (Lamb1)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    298941 (Lamb1)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    298941 (Lamb1)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    298941 (Lamb1)
   05145 Toxoplasmosis
    298941 (Lamb1)
SSDB
Motif
Pfam: Laminin_EGF LAMININ_IV_B Laminin_N F5_F8_type_C
Other DBs
NCBI-GeneID: 298941
NCBI-ProteinID: NP_001100191
RGD: 1306311
Ensembl: ENSRNOG00000005678
Position
6:53562849..53630118
AA seq 1786 aa
MGVLQVFAFGVLALWGTRVCAQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHK
PEPYCIVSHLQEDKKCFICDSRDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVEN
VTVQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGISTG
PMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKL
HTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGFNEEVEGMVHGHCMC
RHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVFLATGNVSGG
VCDNCQHNTMGRNCEQCKPFYFQHPERDIRDPNLCEPCTCDPAGSENGGICDGYTDFSVG
LIAGQCRCKLHVEGERCDVCKEGFYDLSAEDPFGCKSCACNPLGTIPGGNPCDSETGYCY
CKRLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQC
NEVESGYYFTTLDHYIYEAEEANLGPGVVVVERRYIQDRIPSWTGPGFVRVPEGAYLEFF
IDNIPHSMEYEILIRYEPQLPDHWEKAVITVQRPGRIPTSSRCGNTVPDDDNQVVSLSPG
SRYVVLPRPVCFEKGMNYTVRLELPQYTASGSDVESPYTLIDSLVLMPYCKSLDIFTVGG
SGDGEVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALIHQAGLACECDPQGS
LSSVCDPNGGQCQCRPNVVGRTCNRCAPGTFGFGPNGCKPCDCHLQGSVSAFCDAVTGQC
HCFQGIYARQCDRCLPGFWGFPSCQPCQCNGHAEDCDTVTGECLSCQDYTTGHNCERCLA
GYYGDPIIGSGDHCRPCPCPDGPDSGRQFARSCYQDPVTLQLACVCDPGYIGSRCDGCAS
GYFGNPSDFGGSCQPCQCHHNIDTTDPEACDKETGRCLKCLYHTEGDHCQFCQHGYYGDA
LRQDCRKCVCNYLGTVREHCNGSDCHCDKTTGQCSCLPNVIGQNCDRCAPHTWQLASGTG
CEPCNCNAVHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPDVECRACDCDPRGIE
TPQCDQSTGQCVCVEGVEGPRCDKCTRGYSGVFPDCTPCHQCFALWDVIIGELTNRTHKF
LEKAKALKISGVIGPYRETVDSVEKKVNEIRDILAQSPAAEPLKNIGILFEEAEKLTKDV
TEKMAQVEVKLSDTASRSNSTAGELDALQAEAGSLDKTVNELAEQLEFIKNSDIQGALDS
ITKYFQISLEAEKRVNASTTDPNSTVEQSALTRDRVEDLMLERESQFKEKQEEQARLLDE
LAGKLQSLDLSAAAEMTCGTHPGADCSESECGGPNCRTDEGEKKCGGPGCGGLVTVAHSA
WQKAMDFDRDVLNALAEVEQLSKMVSEAKVRADEAKQNAQDVLLKTNATREKVDRSNEDL
RNLIKQIRDFLTEDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVETLSQVEVI
LQQSAADIARAELLLEEAKRASKSATDVKVTADMVKEALEEAEKAQVAAEKAIKQADEDI
QGTQNLLTSIESETAASEETLTNASQRISKLERNVEELKRKAAQNSGEADYIEKVVYSVK
QSADEVKKTLDGELDEKYKKVESLIAQKTEESADARRKAELLQNEAKTLLAQANSKLQLL
EDLERKYEDNQKYLEDKAQELVRLEGEVRSLLKDISEKVAVYSTCL
NT seq 5361 nt   +upstreamnt  +downstreamnt
atgggggtgctccaggtgttcgcctttggtgtcctagccctatggggcacccgagtgtgc
gctcaggaaccagagttcagctatggctgcgcggaaggcagctgctaccccgccactggc
gaccttctcatcggccgagctcaaaagctctcagtgacctcgacatgcggactgcacaaa
ccagagccctactgtattgtcagccacctgcaggaggacaagaaatgcttcatatgtgat
tcccgggatccttatcatgagaccctcaatcctgacagccatctcattgaaaatgtggtc
acaacgtttgctcctaaccgccttaagatttggtggcaatcggaaaatggtgtggagaac
gtaactgtccaactggacctggaagcagaattccacttcacgcatctcatcatgactttc
aagacattccgtccggcggccatgctgatagagcggtcttctgactttgggaagacttgg
ggcgtgtacagatactttgcctacgactgtgagagctcattccccggcatttcgactggc
cccatgaagaaggtggatgacatcatctgtgactctcggtattccgacattgagccctca
acagaaggagaggtgatatttcgtgccttagatcctgctttcaaaattgaagatccttat
agtccaaggatacagaatctattaaaaatcaccaacttgagaatcaagttcgtgaaactg
cacaccttgggagataaccttttggactccagaatggaaatcagagagaagtactattac
gctgtttatgatatggtggttcgagggaactgcttctgctatggtcatgccagtgaatgt
gcccccgtggatggattcaacgaagaagtggaaggaatggttcatgggcactgcatgtgc
agacacaacactaaaggcttgaactgtgagctgtgcatggatttctaccacgatttgccg
tggagacctgccgaaggtcggaacagtaacgcctgcaaaaagtgtaactgcaacgaacat
tccagctcgtgtcactttgacatggcggtcttcctggctaccggcaatgtcagcggggga
gtgtgtgataactgtcagcacaacaccatggggcgcaactgcgagcagtgcaaacccttc
tacttccagcaccctgagagggacatccgggaccccaatctctgcgaaccatgtacctgt
gatccagctggttctgagaatggagggatctgtgacggttacactgatttttctgtgggt
ctcattgctggtcagtgtcggtgcaaattgcacgtggagggagagcgctgcgacgtctgt
aaagaaggcttctatgacctgagtgctgaggacccgttcggttgtaaatcgtgtgcttgc
aatcctctgggaacaattcctggtgggaatccttgtgactctgagaccggttactgctac
tgtaaacgtctggtgacaggacagcgctgtgaccagtgcctgccgcagcactggggctta
agcaatgacttggacggatgtcgaccctgtgactgtgaccttggaggggcattgaacaat
agctgctccgaggactccggccagtgctcctgcctgccccacatgattgggcggcagtgt
aacgaggtggagtctggctactacttcaccaccctggaccattacatctacgaagctgag
gaagccaatcttgggcctggggtcgttgtggtggagaggcggtacattcaggaccgcatt
ccttcctggacaggacctggcttcgtccgggtgcccgagggggcttacttggagtttttc
attgacaacataccacattccatggagtatgaaatcctaattcgctatgaaccacagctg
ccggaccactgggagaaagctgtcatcaccgtacagcggccggggaggattccaaccagc
agccgatgtggtaacactgttcctgatgatgacaaccaggtggtgtccttgtcaccgggc
tcaagatacgttgtcctccctcgcccagtatgctttgaaaaggggatgaactacaccgtg
cggttggagctgccccagtatacggcatctggcagtgacgtggagagcccttatactctc
attgactcgcttgttctcatgccctactgtaagtcgctggacatcttcactgttggaggc
tcaggagatggggaggtcaccaacagtgcctgggaaaccttccagcgctacaggtgtctg
gagaacagccggagtgtggtgaaaacacctatgacagatgtctgcagaaacatcatcttc
agcatttctgccttgatccaccaggcaggcctcgcttgtgaatgtgaccctcagggatct
ctgagttctgtgtgtgaccccaatggaggccagtgccagtgccgccctaacgtggtcgga
agaacctgcaatcggtgtgcacctggtaccttcgggtttggccccaacggatgcaaacct
tgtgactgtcatctacaaggatctgtcagtgccttctgtgacgcagtcactggccagtgc
cactgtttccagggcatatatgctcggcagtgtgaccgatgtctccctgggttttggggc
tttcccagctgccagccctgccagtgtaatggccatgctgaagattgtgacacagtgacc
ggggagtgtctgagctgtcaggactacaccacgggccacaactgcgaaaggtgtctggct
ggttactatggtgatcccatcattgggtcaggagaccactgtcgcccttgtccttgtcct
gatggtcctgacagtggacgccagtttgccaggagctgttatcaagaccctgtcacgctc
cagcttgcatgtgtttgcgatcctgggtacattggctccagatgtgatggctgtgcctct
gggtattttggcaatccctcggactttgggggttcatgtcagccctgtcagtgtcaccac
aacattgacactaccgacccagaagcctgtgacaaggagactgggagatgtctcaagtgc
ctgtaccacacagagggggaccattgccagttttgccagcatgggtactacggcgatgct
cttcgacaagactgtagaaagtgtgtctgcaattacctgggcacagtgagggagcattgt
aacggctctgactgccattgcgacaaaaccaccggtcagtgctcgtgtcttccgaatgtg
atcgggcagaactgtgatcggtgtgcaccccacacctggcagctggccagcgggactggc
tgcgagccgtgcaattgcaatgctgtgcattccttcgggccatcctgcaatgagttcaca
gggcagtgccagtgcatgccaggctttggaggccgaacctgcagcgagtgccaggagctc
ttctggggagaccccgatgtggagtgccgagcctgtgactgtgatcccaggggcattgag
acaccgcagtgtgaccagtccacgggccagtgtgtctgtgtggagggtgttgagggtcca
cgctgtgacaagtgcaccagagggtactccggggtcttccctgactgcacaccctgccac
cagtgctttgctctctgggatgtgatcattggtgagctgaccaacaggacccacaaattc
ctggagaaagccaaggctttgaaaatcagtggtgtgattggtccctaccgagagaccgtg
gactctgtggagaagaaagtcaatgaaataagagacatcctggcccagagcccagcagcg
gaaccactgaaaaacattggcattctctttgaggaggcagagaaattaaccaaagatgtc
acagaaaagatggctcaagtagaagtgaaattatctgacacagcttcacggagtaacagc
acagccggagagctggacgcactgcaggcagaagcagggagccttgacaagaccgtgaac
gagctggcagaacagctagaatttatcaaaaactccgatattcagggtgccttagacagt
atcaccaagtatttccagatctctcttgaggcagaaaagagggtgaacgcctccaccaca
gaccccaacagcactgtggagcagtcagccctcacccgagacagagtggaagatctgatg
ttggagcgagagtctcagttcaaggaaaagcaggaggaacaggcgcgccttctggatgaa
ctggcgggcaaactgcaaagtctagacctgtcggctgctgcagagatgacctgtggaacg
catccaggggctgactgttctgaaagtgaatgtggtggccccaactgcagaactgacgaa
ggagagaagaagtgtggagggcctggctgtggtggtctggtcactgtggcccatagtgcc
tggcagaaagccatggattttgaccgtgatgtcctgaatgccctggctgaagtagaacag
ctctccaagatggtctctgaagcaaaagtgagagcggacgaggctaagcagaatgctcag
gatgtcctgttgaaaacaaatgccaccagagagaaagtggacaggagcaatgaggacctg
aggaacctcatcaagcaaatcagagactttctgacggaggacagcgctgatctggacagt
attgaagccgttgcgaacgaagtactgaagatggaaatgcctagcaccccacagcagttg
caaaacctaacagaagacatccgggaacgagttgaaaccctttcccaagtagaagttatt
ttgcagcagagtgctgctgacattgccagagctgagctgttgctggaagaagctaagaga
gcaagcaaaagtgcaacagatgttaaggtcactgcagacatggtaaaggaggcgttggaa
gaagcagaaaaggcccaggttgcagcagagaaggcgattaaacaagctgatgaggatatc
caggggacccagaacctgctaacatcgattgaatctgagacagcagcgtctgaggaaacc
ctgaccaatgcctcccagcgcatcagcaagcttgagaggaatgtggaagagcttaagcgt
aaagctgcccagaactctggggaggcagactatattgaaaaagtcgtatatagtgtaaaa
cagagtgcagacgaggttaagaagactctagatggcgaacttgatgaaaaatataagaag
gtagagagtttaattgcccaaaaaactgaagagtcagcagatgccaggaggaaagctgag
ctgctacaaaatgaagcaaaaacactcctggcccaagccaacagcaaacttcagctgtta
gaagacttagaaaggaagtatgaggacaatcaaaagtacttagaagataaagctcaagaa
ctggtgcgactggaaggagaggtgcgctcactccttaaggacataagtgagaaagttgcc
gtttacagcacctgcttataa

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (8)   
   KEGG PATHWAY (8)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (5)   
   UniProt (1)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (4)   
   Pfam (4)   
All databases (29)   

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