KEGG T01003: 303637

Rattus norvegicus (rat): 303637

Entry

303637 CDS T01003

Gene name

Abca8, Abca8b

Definition

ATP-binding cassette, subfamily A (ABC1), member 8

Orthology

K05650

ATP-binding cassette, subfamily A (ABC1), member 8

Organism

rno Rattus norvegicus (rat)

Pathway

rno02010

ABC transporters

Class

Environmental Information Processing; Membrane transport; ABC transporters [PATH:rno02010]

SSDB

Motif

Pfam:

ABC_tran ABC2_membrane_3 AAA_21 DUF258 AAA_29 AAA_15 SMC_N AAA_16 AAA_23 MMR_HSR1 AAA_25 DUF4407 Dynamin_N

Other DBs

NCBI-GI:

NCBI-GeneID:

RGD:

Ensembl:

Position

10q32.1

AA seq 1574 aa
MIKREISVRQQTCALLQKNLLKKWRLRRETLMEWMSSLLLLLFLCWYPHGHEATDFSSVP
TKDLGRVDSFTQSGFMIGYTPVTSTTRQIMEKVAAVPFMAGRKVLGLLDEENIRELTESH
QEVIRVIFSDTFSYHLKFQFGQRIPKSREHGDHEAHCFEMYEDVDCLISIFWKKGFVALQ
AAINAAIIETTTNHSVMEKLLSVSGKFMKIHPFVRQEGILTDFFIFTCIVSFSPITYFVS
ISVARERKKMKGLMMMMGLRDSAFWLSWGLLYAGFVFVMALSLALVIKSVQFLILTSFTV
VFSLFLLYGLSMISLAFLMSVLVRKSVLTGLTVFLLTIFWGSLGFTALYRYLPAPLEWTL
SLFSPFAFTLGMAQLLRVDYDLNSNAPPDPAGSSNLIAATNFMLAFDALLYLALTMYFEK
VLPNEYGHQRSPLFFLKPSFWVQPRKPAHVILEDGIDPAPLSGGSFEPVSPEFHGKESIR
IRNISKEYKGKPSKIEALKDLTLDIYEGQITALLGHSGAGKSTLLNILSGLSVPTKGSVT
IYNNRLSEMADLESVFRISGVCPQSNVQFDFLTVRENLRLFAKIRGVPPQEVEKEVQRVL
LELEMKNIQDILARNLSGGQKRKLTFGTAILGDSQIFLLDEPTAGLDPFSRHRVWNLLKE
RKADRVVLFSTQFMDEADILADRKVFISRGKLKCAGSSLFLKKKWGVGYHLSLQLKEVCV
PENITSLVKQHIPEAKLSAERERTLVYTLPLETTYRFPELCQSLDSCPGLGIDSYGVSMT
TLNEVFLKLEGKSAIEEPEVDIVGEGQTERSGDTERLMEMEQTLSTLTETKKKTGSLALW
RQQTCAIAKARLLKLKHERKTLLSVLLVLGVALCPLLFESIKMKILQSAYTWDLSPHSYF
LAPGQQPHGMLTQLLIINKTEASIDDFIQSVERQNIALEVDASGARDGTDDPSFNGALTV
SGGEKDEITNPLQQLGKTTFWLTLTSACPPYIAMSSVTDYKNKVWFQLRVSGLFPSAYWF
GQALVDIPLYCFVFLFMSLMDYLLGFPDATLIVITHVLQIPCSVGYAISLIFLTYVISFI
SRKGKKNSGIWSLCFYIITMFSVVAMLLDFNVDAILYCIIFLLPPSTLIGCLILSMHLFI
YRISREESIVEPFLVFLIPLLHVFIFIFTLRCLEWKFGKKTMRKDPIFRISPRNNDVHQN
PEEPEGEDEDVQMERMRTASALASTSFDEKPVIVASCLRKEYAGKWKHCLSKKKAKIATR
NVSFCVRKGEILGLLGHNGAGKSTSLKMISGDTKSTAGQVLLKGSREGDALGFLGYCPQE
NALWPNLTVKEHLEVFATVLGLSKSHAAVTITRLADALQLQDQLKSPVKTLSEGVKRKLC
FVLSILGNPSILLLDEPSTGLDPEGQQQIWQAIRAIIKNTDRGALLTTHYMAEAEALCDR
VAILVSGRLRCIGSIQHLKSKFGKDYLLEMKVKTLEQVELLNTEVLRLFPQAARQERYSP
LMVYKLPVEDVQPLSQAFFKLEKVKQTFDLEEYSLSQSTLEQVFLELSKEQEMDGFEEEL
DSSIKWKLLPQEEV

NT seq 4725 nt +upstreamnt +downstreamnt
atgatcaagagagagataagtgtgcgccaacaaacttgtgctttattacagaagaacctt
cttaagaaatggagactgagaagggagaccttgatggaatggatgagctcattgctcctt
ctgcttttcttgtgttggtatccgcatggtcatgaagctactgacttttcctcagtgccc
accaaggatctgggacgagtcgattcttttacacaatctgggttcatgatagggtataca
cctgtcaccagcacgacccgacagataatggagaaggtagctgctgtccctttcatggca
ggtagaaaagtcctgggactgttggatgaagaaaacatcagggaattaacagaaagtcat
caggaagtaataagagtcattttctctgatacgttctcatatcatctgaaatttcaattt
ggacagagaatcccaaagtcaagggaacatggagatcatgaagctcattgttttgagatg
tatgaagatgttgactgtctgatatcaatattctggaagaaaggatttgtggctcttcaa
gctgccatcaatgctgccattatagaaaccacgacaaaccattcggtgatggagaaactg
ctgtcagtttcggggaaattcatgaagatccatcctttcgtcaggcaagaggggattttg
actgatttcttcattttcacctgcatcgtttccttctccccaatcacctattttgtgtca
atcagtgttgcaagagagaggaaaaagatgaagggcttgatgatgatgatgggtcttcga
gattcagcattctggctatcctggggtctgctctatgctggctttgtcttcgtgatggcc
ctatccctggcacttgttatcaagtctgtccagtttcttattctgaccagcttcacggtg
gtctttagcctcttcctcctgtacggattgtctatgatctctttggccttcctaatgagc
gtcttggtgaggaagtctgtcctcactggcctgactgtgttccttctcaccatcttctgg
ggaagcctcggtttcacagccctgtacagatatctccctgcacctttggaatggactctc
agtctttttagccccttcgccttcacactaggaatggcccagctcttacgcgtggactat
gatttaaattctaacgcaccccctgatccagctggtagctcaaatctgattgcagcaacc
aatttcatgctggcatttgatgcgcttttgtatctggccctgacgatgtactttgaaaaa
gttctgccaaatgagtatggacaccagcggtctcccctgtttttcctgaaaccctcattt
tgggtacaaccacgaaagcctgctcacgtgattcttgaagatggaatagatcccgctcct
ttatcaggtggctcgtttgaaccggtgtccccagaattccacgggaaagaatccatcaga
atcagaaatatttcaaaagaatacaaaggaaagcccagtaaaatagaagccttgaaagac
ctgacactggacatatatgaaggccaaatcacagctttacttggtcacagtggagctggg
aagtcaacactgttaaatatccttagtggattatctgtccctaccaaaggttccgtcacc
atctataacaatagattatcagaaatggctgacctagaaagtgtgttcaggatctcagga
gtttgtccacaatccaatgttcaatttgacttccttactgtgagagaaaacctcagactt
tttgctaaaataagaggagttccaccccaagaggtggagaaagaggtgcaaagggttttg
ctggaattggaaatgaaaaatattcaagatatccttgctcgaaacctaagtggtggacag
aagagaaagctaactttcggaactgccattttaggagattctcagattttcctactggat
gagcccactgctgggctggatcccttttcaaggcaccgggtgtggaatctcctgaaggag
cgcaaagcagaccgtgtggtcctcttcagcacgcagttcatggatgaagctgacattctg
gctgacaggaaagtgttcatctccagggggaagctgaagtgtgcaggctcatctctcttc
ctgaagaagaaatggggcgttgggtatcacttaagtttgcagctgaaggaagtctgtgtt
ccggagaacatcacatcactggtgaaacagcacatccctgaggccaagctgtcagctgaa
agggagaggacacttgtctatacattacccttagaaacaacctatagatttccagaactt
tgccagagtcttgacagctgtcctggactgggaattgatagctatggtgtttccatgacg
actttgaatgaggtgttcctgaagctagaaggaaaatcagcaattgaagaaccagaggtt
gacatagtgggagaaggacaaacagagagatctggggacacagagagactcatggagatg
gagcagactctctctacacttacggagacgaagaagaagacaggcagcttggctctctgg
agacagcaaacctgtgcaatcgcaaaggctcgcttgttgaagttaaagcatgaaaggaaa
acacttctctctgtgctcttggttctgggagttgccctttgccctcttcttttcgaaagt
atcaagatgaaaatacttcagagcgcttacacttgggatctttccccacactcgtacttc
cttgcccctggacaacagccccacggcatgctcactcagttactgatcatcaataagaca
gaggcaagcattgatgactttatccagtctgtggagcgccagaacatagctttggaagtc
gatgcttccggagccagagatggcacggatgacccatccttcaacggagcccttacagtg
tctggcggtgagaaggatgaaattactaatcctttacaacagctggggaagaccacgttc
tggctgactctgacctcggcttgccctccttatatagccatgagcagcgtcacagactat
aagaacaaagtgtggttccagctgcgggtctccggcctcttcccttccgcttactggttc
gggcaggcactggtggatattccgctctactgcttcgtcttcctcttcatgtctttaatg
gactacctcttaggcttcccagatgccacgcttattgttataactcacgttctacaaatc
ccgtgttctgtcggctatgccatatccctgatcttcttaacatacgtgatttccttcatt
tctcgcaaggggaaaaaaaacagcggcatttggtcactttgcttctatatcatcaccatg
ttctcggtggttgcaatgttgctggatttcaatgtggatgctatactgtactgcatcatc
tttttactaccgccgtccactctgattggatgtctgatcttatctatgcatcttttcata
tatcggatctctcgtgaagaatcaattgtagagccatttctggtattcctcattccttta
cttcatgttttcatttttatttttacccttcgatgtctggaatggaagtttggaaagaaa
acaatgaggaaggatcccatttttagaatctctccaagaaacaatgatgtgcatcaaaac
ccagaagagccagaaggtgaggatgaagatgttcaaatggagagaatgagaacagcgagt
gccttggcatccaccagttttgatgagaagccagtcattgttgccagctgcctacgcaaa
gagtacgcagggaaatggaaacattgcctttctaagaagaaggctaagatagccaccagg
aatgtctcattctgtgtcaggaaaggtgagattctaggattgctgggacacaatggagct
ggcaaaagtacatctcttaaaatgataagtggagacacaaaatccacagctgggcaggtg
ctactgaaagggagcagagaaggggacgccctggggttcctggggtactgtcctcaagag
aacgctctgtggcccaacctcactgtgaaggagcacctggaggtatttgctacagtgttg
ggcctgagcaaaagtcacgctgcagtcaccattacaaggttggcagatgcgctccagctg
caggaccagctgaagtctccggtgaagacactgtcagagggagtgaagagaaagctgtgt
tttgtgctgagcatcctgggaaacccttctatattgcttctggatgagccttcaactggg
ctggatcctgaagggcaacagcaaatatggcaagcaatcagggccatcataaaaaataca
gacaggggcgcccttctcaccacccattacatggcagaggctgaggctctgtgtgaccgc
gtggccattctggtgtctggaaggttgaggtgtattggatcaatccaacatctcaaaagc
aaattcggcaaagattacctgctggagatgaaggtgaagactctcgagcaggtggagctc
ctcaacacagaggtcctaaggcttttcccccaggctgctaggcaggaaaggtactctcct
ctcatggtttacaaattaccagtggaagatgtgcaacctttatcccaagcgttcttcaag
ttagagaaggttaagcagacttttgacttggaagagtatagcctctctcagtctaccttg
gagcaggtcttcttagagctctccaaggagcaagagatggatggctttgaggaagaacta
gactcctctataaaatggaagctcctcccacaggaagaggtttaa

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   ENSEMBL-RNO (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (13)   
   Pfam (13)   
All databases (25)   

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