KEGG   Rattus norvegicus (rat): 305918
Entry
305918            CDS       T01003                                 
Symbol
Ift88
Name
(RefSeq) intraflagellar transport protein 88 homolog
  KO
K16474  intraflagellar transport protein 88
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:rno03037]
    305918 (Ift88)
Cilium and associated proteins [BR:rno03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   305918 (Ift88)
SSDB
Motif
Pfam: TPR_1 TPR_2 TPR_12 TPR_7 TPR_8 TPR_6 TPR_14 TPR_19 TPR_16 TPR_11 ANAPC3 TPR_17 TPR_10 TPR_9 TPR_21 TPR-S RPN7 TPR_15 DUF6584 Coatomer_E FumaraseC_C
Other DBs
NCBI-GeneID: 305918
NCBI-ProteinID: NP_001100736
RGD: 1309717
Ensembl: ENSRNOG00000009278
Vega: OTTRNOG00000001002
UniProt: A6KHC0
Position
15:35685678..35786875
AA seq 815 aa
MMENVHLAPETDEDDLYSGFNDYNPAYDTEELENDTGFQQAVRTSHGRRPPVTAKIPSTA
VSRPIATGYGSKTSLTSSMGRPMTGTIQDGVARPMTAVRAAGFSKAALRGSAFDPLGQSR
GPAPPLEAKNEDSPEEKIRQLEKKVNELVEESCIANSCGDLKLALEKAKDAGRKERVLVR
QREQVTSPENINLDLTYSVLFNLASQYSANEMYAEALNTYQVIVKNKMFSNAGRLKVNMG
NIYLKQRNYSKAIKFYRMALDQIPSVHKEMRIKIMQNIGITFIKTGQYSDAINSFEHIMS
MAPSLKAGFNLILSCFAIGDREKMKKAFQKLIAVPLEIDEDDKYISPSDDPHTNLLIEAI
KNDHLRQMERERKAMAEKYIMTAAKLIAPVIEASFAVGYNWCVEVVKASQYVELANDLEI
NKAITYLRQKDFNQAVDTLKMFEKKDSRVKSAAATNLSFLYYLENEFAQASSYADLAVSS
DRYNPSALTNKGNTVFANGDYEKAAEFYKEALRNDSSCTEALYNIGLTYKKLNRLDEALD
SFLKLHAILRNSAQVLCQIANVYELMEDPNQAIEWLMQLISVVPTDSQALSKLGELYDSE
GDKSQAFQYYYESYRYFPSNIEVIEWLGAYYIDTQFCEKAIQYFERASLIQPTQVKWQLM
VASCFRRSGNYQKALDTYKEIHRKFPENVECLRFLVRLCTDIGLKEVQEYATKLKRLEKM
KEMREQRIKSGRDSGGGSRSKREGSAGSDSGQNSSASSKSERLSAKLRALPGTDEPYESS
GNKEIGKCLLCGSTGPSDRKTKNCSQKENRRGRFC
NT seq 2448 nt   +upstreamnt  +downstreamnt
atgatggaaaatgttcatctggcaccagaaacagatgaggatgatctttactctggtttc
aatgactacaatccagcctacgatactgaggagttggagaatgacacgggttttcagcaa
gcagtgagaaccagtcatggcagaagacctccagtaactgcaaagataccaagcacagct
gtcagcagacccatagctactggatatgggtccaagacatccctgacatcatcaatggga
aggccgatgacagggactattcaggatggagttgctcgaccgatgacggcggtgagagca
gctggcttttccaaggcagctttgcgaggctctgcatttgacccccttggtcagtctagg
ggccctgctcctcctttggaagccaaaaatgaagacagtccagaagaaaagattagacag
ttagagaagaaagtaaatgagttggtggaagaaagctgtattgccaacagttgtggagac
ttaaaactggccttagagaaggcaaaagatgcaggaagaaaagagagagtcctggtgaga
caacgagagcaagtcacaagtccagaaaatatcaacttggacctaacctactccgttctt
ttcaacttggcaagtcagtattctgctaatgaaatgtatgcagaagcactaaacacatac
caagttatagtgaaaaataagatgtttagcaatgcaggaagactgaaagtgaatatggga
aatatttatttaaagcagaggaattattccaaagctattaaattctaccgaatggcctta
gatcagatcccaagtgtccataaagaaatgaggattaaaataatgcagaacatcgggatc
acgtttataaagaccggtcagtactcagacgccatcaactcattcgagcacatcatgagc
atggccccaagcctgaaggcaggcttcaacctcattctcagctgcttcgccattggagat
cgagagaaaatgaagaaggcattccaaaagttaattgctgttccgttggaaattgacgaa
gacgataaatatatctcccccagtgatgatccccatactaacttattgattgaagctata
aaaaatgaccatcttaggcaaatggaacgtgaaaggaaagccatggcagaaaaatacatc
atgacagctgcaaaactcattgctcctgtgatcgaagcctcctttgctgtgggttataac
tggtgtgtggaagtagtgaaggcctctcagtacgtggagctggccaacgacctggagatt
aacaaagcaatcacctacttgagacagaaggacttcaaccaggctgtagacacattgaaa
atgtttgagaagaaggacagtagagtgaagagtgcagctgcgaccaacctctcattcctg
tattatctggagaacgaatttgcccaagccagcagctatgcagatttagctgtgagctca
gacagatacaacccatcagctctcactaacaaggggaacacagtgtttgcaaatggtgac
tacgagaaggcagctgagttctataaagaggccctaagaaacgattcttcttgtactgaa
gcactttataacattggcctcacctacaagaagctcaaccgcctggacgaagcgttggac
tccttcctgaaactgcatgcaatccttcggaacagcgctcaagttctgtgccagatagca
aatgtatacgagttaatggaagatcccaatcaggctattgagtggctgatgcagttgatc
agcgtggttccaactgattcccaagcgctgtctaaactgggagagttgtacgatagtgag
ggagacaagtcccaggcgttccaatattactatgagtcatataggtatttcccttctaac
attgaagtcatcgaatggcttggagcttattacattgatacccagttctgcgagaaagcc
attcagtactttgaaagagcttcccttatacaacccacacaagtgaaatggcagctgatg
gtagctagctgttttagaagaagtggtaactaccaaaaggcattagatacttacaaagag
attcacaggaaatttccagagaatgttgaatgtttgcgtttcttggttcgtctctgcaca
gatattggattaaaagaagttcaagaatatgccacaaaactcaagaggttggaaaaaatg
aaagaaatgcgggaacagcgcataaaatcaggcagagacagcggcgggggctctcgcagc
aaacgagaggggagcgctggcagtgatagtggccagaacagtagtgccagtagtaaaagt
gaacgactgagtgccaagctcagagctttgcctgggacagacgaaccttatgaaagtagc
gggaacaaagaaataggcaaatgcctcctatgtggatccactgggccctcagatagaaag
accaaaaactgcagccagaaagagaatcgacgaggacgattttgctga

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