KEGG T01003: 306375

Rattus norvegicus (rat): 306375

Entry

306375 CDS T01003

Gene name

Csgalnact1, Chgn, RGD1307618

Definition

chondroitin sulfate N-acetylgalactosaminyltransferase 1 (EC:2.4.1.174)

Orthology

K00746

chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:2.4.1.174 2.4.1.175]

Organism

rno Rattus norvegicus (rat)

Pathway

rno00532	Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
rno01100	Metabolic pathways

Module

rno_M00058

Glycosaminoglycan biosynthesis, chondroitin sulfate backbone

Class

Metabolism; Glycan biosynthesis and metabolism; Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate [PATH:rno00532]

SSDB

Motif

Pfam:

CHGN Glyco_transf_7C Glyco_tranf_2_2 HAP1_N IncA

Other DBs

NCBI-GI:

NCBI-GeneID:

RGD:

UniProt:

Position

16p14

AA seq 530 aa
MVRRGLVGWISRVVILLVLLCCAISVLYMLACTPKGDQEQLGLPRANGPTGKDGYQAVLQ
EREEQHRNYVNSLKRQIAQLKDELQARSEQLRSGQDQASDATSLRSGWDPEPKAQADILA
FLRGQVDKAEVHAGVKLATEYAAVPFDSFTLQKVYQLETGLTRHPEEKPVRKDKRDELVE
AIESALESLNSPVESSPHQRPYTAADFIEGIYRTERDKGTLYELTFKGDHKHEFQRLVLF
RPFGPIMKVKKEKLNMANTLINVIVPLARRVDKFRHFMQNFREMCIQQDGRVHLTVVYFG
KEEMNEVKGILENTSKAANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVVLFFCDVDIY
FTSEFLNTCRLNTQPGKKVFYPVLFSQYNPGIIYGHHDAVPALEQQLVIKKETGFWRDFG
FGMTCQYRSDFINIGGFDLDIKGWGGEDVHLYRKYLHSNLIVIRTPVRGLFHLWHEKHCM
DELTPEQYRMCMQSKAMNEASHGQLGMLVFRHEIEAHLRKQKLKASSKKT

NT seq 1593 nt +upstreamnt +downstreamnt
atggtccgacgcgggctggtggggtggatttcccgggtagtgattctgctggtgctgctc
tgttgtgccatctctgttctctacatgttagcctgcaccccaaaaggcgaccaagagcag
ctgggactgccacgggccaacggccccacaggcaaagatggctaccaagcggtgctacag
gagcgtgaggaacagcatcgcaactatgtgaatagtcttaagcgacagatcgcgcagctc
aaggatgaactgcaggcacgcagtgagcagctccgcagtgggcaggaccaggccagcgat
gccaccagcctgcggtcaggctgggaccctgaacccaaagcccaggctgatatactggcc
ttcctgcgtgggcaggtggacaaggctgaggtccacgccggtgtcaagctggccaccgaa
tatgctgctgtgccttttgatagcttcactctgcagaaagtataccagctggagactggt
ctgacccgccaccctgaggagaaaccagtgaggaaggacaagcgagatgagctagtggaa
gctatcgaatcagccctggagagtctaaacagccctgtggaaagcagcccacaccagcgc
ccttacacggctgcagacttcatagaagggatctaccgaacagaaagggataaaggcact
ttgtatgagctgaccttcaaaggggaccataagcatgaattccaacgacttgtcctattt
cgaccttttggccccatcatgaaagtgaagaaggaaaagctcaacatggccaacacactt
atcaacgttatcgtgcccctagcgaggagggtggacaagttccggcacttcatgcagaac
ttcagggagatgtgcatccaacaagatgggagagttcatcttaccgttgtttattttggg
aaagaagaaatgaatgaagtcaaaggaatacttgaaaacacttccaaggctgccaatttt
agaaacttcaccttcatccagctgaatggagagttctcccggggaaagggactggatgtt
ggagcccgcttctggaagggaagtaatgtcgtgctctttttctgtgatgtggacatctac
ttcacctctgagttcctcaacacatgtaggctgaacacacagccagggaagaaggtattt
tatccggttcttttcagtcagtataaccctggcataatctacggccatcatgatgctgtc
cctgccctagaacagcagctggtcataaagaaggaaacaggattttggagggactttgga
ttcggaatgacttgtcagtaccggtcagacttcatcaacataggtggatttgacctggac
atcaaaggctggggcggtgaagatgtgcacctgtaccggaaatatctccatagcaacctc
atagtgatacgcacgcctgtacggggacttttccacctttggcatgagaagcactgtatg
gatgaactgacccctgagcagtacaggatgtgcatgcaatcaaaggctatgaatgaagca
tcccacgggcagctgggaatgcttgtcttccggcatgaaatagaggctcaccttcgcaaa
cagaagctcaaagccagcagtaaaaagacatga

All links

Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical reaction (3)   
   KEGG ENZYME (2)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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