KEGG T01003: 308896

Rattus norvegicus (rat): 308896

Entry

308896 CDS T01003

Gene name

Usp47

Definition

ubiquitin specific peptidase 47

Orthology

K11857

ubiquitin carboxyl-terminal hydrolase 47 [EC:3.1.2.15]

Organism

rno Rattus norvegicus (rat)

Class

SSDB

Motif

Pfam:

UCH UCH_1 Ubiquitin_2 ubiquitin CP2

Other DBs

NCBI-GI:

NCBI-GeneID:

RGD:

Ensembl:

UniProt:

Position

1q33

AA seq 1355 aa
MVPGEENQLVPKEIENAAEEPRVLCIIQDTTNSKTVNERITVNLPASTPVRKLFEDVANK
VGYINGTFDLTWGNGINTADLAPLDHTSDKSLLDANFEPGKKNFLHLTDKDGEQPQMLLD
DSSHVDDSVHDRFIGPLPREGSVASTSDYVSQSYSYSSILNKSETGYVGLVNQAMTCYLN
SLLQTLFMTPEFRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETTDVTRSF
GWDSSEAWQQHDVQELCRVMFDALEQKWKQTEQADLINELYQGKLKDYVRCLECGYEGWR
IDTYLDIPLVIRPYGSSQAFASVEEALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFL
HFPYLLTLQLKRFDFDYTTMHRIKLNDRMSFPEELDMSTFIDIEDEKSPQTESCTDSGAE
NEGSCHSDQMSNDFSTDDAVDEGICLESSTGSEKISKPGLEKNSLMYELFSVMVHSGSAA
GGHYYACIKSFSDDQWYSFNDQHVSRITQEDIKKTHGGSSGSRGYYSSAFASSTNAYMLI
YRLKDPTRNAKFLEVDEYPEHIKNLVQKERELEEQEKRQREIERNTCKIKLFCLHPVKQV
MMENKLEVHKDKTLKEAVEMAYKMMDLEDVIPLDCCRLVKYDEFHDYLERSYEGEEDTPM
GLLLGGVKSTYMFDLLLETRKPDQIFQSYKPGEVMVKVHVVDLKAETVAAPVTVRAYLNQ
TVLEFKQLISKATHLPAEPMRIVLERCYNDLRLLSMPSKTLKAEGFFRSNKVFVESSETV
DHQAAFTDSHLWKLLDRHANTIRLFVLLPEQSPGSYSKRTAYQKAGGDSGNVDDDCERAK
GPAGSLKSVDAILEESTEKLKSLSLQQQQDGDNGDSSKSTETSDFENIESPLNERGSSTS
VDNRELEQHIQTSDPENFQSEERSDSDVNNDRSTSSVDSDILSSSHSSDTLCNADSAQIP
LANGLDSHSITSSRRTKANEGKKETWDTAEEDSGTDSEYDESGKSRGEMQYMYFKADPYT
ADEGSGEGHKWLMVHVDKRITLAAFKQHLEPFVGVLSSHFKVFRVYTSNQEFETVRLNET
LSSFSDDNKITIRLGRALKKGEYRVKVCQLLVNEQEPCKFLLDAVFAKGMTVRQSKEELI
PQLREQCGLDLSIDRFRLRKKTWKNPGTVFLDYHIYEEDINISSNWEVFLEVLDGVEKMK
SMSQLAILTRRWRPSEMKLDPFQELVLESNSVDELREKLSEISGIPLEDIEFAKGRGTFP
CDISVLDIHQDLDWNPKVSTLNVWPLYICDDGAVIFYRDRTEEVMELTDEQRNELMKKES
SRLQKTGHRVTYSPRKEKALKIYLDGAPNKDVAQD

NT seq 4068 nt +upstreamnt +downstreamnt
atggtgcccggcgaggagaaccaactggtcccgaaggagatagaaaatgctgctgaagaa
cctagagtcttatgtataatacaggacactactaactcaaagacagtgaatgaacggatc
acagtgaatttaccagcatctaccccagtcagaaagctctttgaagatgtggccaacaaa
gtaggctacataaacggaacctttgatttgacatggggaaatggaatcaatactgctgat
ttggcaccactggatcacaccagtgacaagtctcttcttgatgctaattttgagccagga
aagaagaactttctgcatttgacagataaagatggagaacagcctcagatgctattggat
gactccagtcacgtggacgacagcgtgcatgacaggtttataggtccacttccaagagaa
gggtctgtggcttctaccagtgattatgtcagccagagctactcctattcatcaattttg
aacaagtcagaaactggttatgtgggattagtaaaccaggcgatgacgtgctatttgaat
agccttttgcaaacactttttatgactcctgaatttaggaatgccttatataagtgggag
tttgaagagtctgaagaagatcctgtaacgagcatcccataccagcttcagaggcttttt
gttctgttacaaaccagcaaaaagagagcaattgagaccacagatgtcacaaggagcttt
ggatgggatagcagtgaggcttggcaacagcatgatgtacaagaactgtgccgtgttatg
tttgatgctttggaacagaaatggaagcaaacagaacaggctgatcttataaatgagctg
taccaaggcaaactgaaagactatgtgaggtgtctggaatgcggttatgaaggctggaga
attgacacgtaccttgatattccactggtcatccgaccttatgggtctagccaagcattt
gccagtgtggaagaagcattgcatgcatttattcaaccagagatcttggatggcccaaat
caatacttctgtgaacgttgtaagaagaagtgcgatgctcgtaagggccttcggtttttg
cactttccctatctgctgactttacagttgaaaaggtttgattttgattatacaaccatg
catagaattaaactgaatgatcgaatgtcatttccagaggagctggatatgagcacattt
attgatattgaagatgagaaatctcctcagactgaaagttgcactgatagtggagcggaa
aatgaaggcagttgccacagcgaccagatgagcaatgatttctccacggatgatgctgtt
gatgaagggatatgcctggagagcagtactgggagtgagaagatttcaaaacctggcctg
gaaaagaactccctgatgtatgagctcttctcggtgatggtacattcagggagtgctgct
gggggacactattatgcttgcataaagtctttcagcgacgatcagtggtacagtttcaat
gaccaacatgtgagcaggataacacaagaagacattaagaagacacacggtgggtcttca
ggaagcagaggctactactccagtgcttttgcaagctcaacaaatgcatatatgctgata
tacagactgaaggatccaacaagaaatgcaaaatttctggaagtggatgagtacccagaa
cacattaagaacctggtgcagaaggagagagaattggaagaacaggaaaagaggcaacga
gaaattgaacgaaacacatgcaagataaaattattctgtttacatcctgtgaaacaagta
atgatggaaaacaagttggaggttcataaggacaagacattaaaggaagcagtagaaatg
gcttataagatgatggatttagaagacgtgattcccttggattgctgtcgcctggtaaaa
tatgatgagtttcatgattacctggaacgatcctatgagggagaagaagatacgccaatg
gggctgcttctaggaggagtcaagtcaacgtacatgtttgatctgctgttggagacaaga
aagcctgatcaaatttttcagtcttataaacctggagaagtgatggtgaaagttcatgtt
gtcgatctgaaggcagagactgtcgctgctcctgtaacagtgcgtgcttatttaaatcag
acagttttggagttcaaacagctgatctcaaaggccacacacttacctgcagaacccatg
aggatcgtgctggagcgctgctacaacgacctgcgcctgctcagcatgcccagcaagacc
ctgaaggctgagggcttctttagaagtaacaaggtgtttgttgaaagctctgagacagta
gatcaccaggcagccttcacagactcccacttgtggaaactcctggatcgacatgcaaat
acaatccggttatttgttttgctgcctgaacaatctccagggtcttattcgaaaaggaca
gcataccagaaagctggaggggattctggtaatgtggacgatgactgtgaaagagccaag
ggacctgcaggaagtttaaagtctgtggatgccattctagaagagagcactgaaaaactc
aaaagcctgtcactgcagcagcagcaggatggggacaacggagacagcagcaaaagcact
gagacaagtgactttgagaatattgaatcccctctcaatgagaggggctcttccacctct
gtggataatcgagaacttgaacaacacattcagacttctgacccagaaaactttcagtct
gaagaacgctcagactcagatgtgaataatgaccggagtacaagttcggtagacagcgat
attcttagctctagtcacagcagcgacactttgtgcaatgcagacagcgctcagattcct
ttggccaatggactcgattctcacagtatcacaagtagtagaagaactaaggcaaacgaa
gggaaaaaggagacatgggacacagctgaagaagactctgggactgacagtgaatatgat
gagagtggcaagagcaggggggagatgcagtacatgtacttcaaagctgacccctacact
gcggacgaaggctctggggaaggacacaaatggttgatggtgcatgttgataagagaatc
accctggcagctttcaaacagcatttagagccttttgttggagtcctctcctctcacttc
aaggtttttcgagtgtacaccagcaatcaagagtttgagaccgtccggttgaatgagacc
ctttcatcattttcagatgacaataagatcacaatccgactggggagagcactgaagaag
ggagagtacagagttaaagtgtgccagctcttagtcaatgagcaagagccatgcaagttt
ctgctagacgccgtatttgctaaaggcatgactgtgcggcaatcgaaagaggagctgatt
cctcaactcagggagcagtgtggcttagacctcagcatcgacaggtttcgtctaaggaag
aaaacatggaagaatcctggcactgtttttttggattatcatatttatgaagaagatatt
aatatttctagcaactgggaagttttcctggaagttcttgatggtgtggagaagatgaag
tccatgtcacagcttgccattttaaccagacggtggaggccttcggagatgaagttggat
cccttccaggagcttgtgttggagagcaatagtgttgatgagcttcgagagaagctgagt
gaaatcagtgggattcctttggaagacattgaatttgccaagggtaggggaaccttcccc
tgtgatatttctgtccttgatattcatcaagatttggactggaaccctaaagtctctacc
ttgaatgtgtggcctctttatatctgtgatgatggtgccgtcatattttatagggataga
acagaagaagtaatggaattgacagatgagcaaaggaatgaactgatgaaaaaggaaagc
agccgactgcagaagacgggacatcgtgtgacatactcccctcgcaaagagaaagcactc
aagatctacctggatggggcgccaaataaagacgtagctcaagactga

All links

Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   ENSEMBL-RNO (1)   
   OC (1)   
   RGD (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (15)   
   RefSeq(nuc) (1)   
   GenBank (7)   
   EMBL (7)   
Protein domain (5)   
   Pfam (5)   
All databases (33)   

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