KEGG   Rattus norvegicus (rat): 311786Help
Entry
311786            CDS       T01003                                 

Gene name
Traf2
Definition
Tnf receptor-associated factor 2
Orthology
K03173  
TNF receptor-associated factor 2
Organism
rno  Rattus norvegicus (rat)
Pathway
MAPK signaling pathway
NF-kappa B signaling pathway
Protein processing in endoplasmic reticulum
Apoptosis
Osteoclast differentiation
RIG-I-like receptor signaling pathway
TNF signaling pathway
Adipocytokine signaling pathway
Hepatitis C
Herpes simplex infection
Epstein-Barr virus infection
Pathways in cancer
Viral carcinogenesis
Small cell lung cancer
Class
Genetic Information Processing; Folding, sorting and degradation; Protein processing in endoplasmic reticulum [PATH:rno04141]
Environmental Information Processing; Signal transduction; MAPK signaling pathway [PATH:rno04010]
Environmental Information Processing; Signal transduction; NF-kappa B signaling pathway [PATH:rno04064]
Environmental Information Processing; Signal transduction; TNF signaling pathway [PATH:rno04668]
Cellular Processes; Cell growth and death; Apoptosis [PATH:rno04210]
Organismal Systems; Immune system; RIG-I-like receptor signaling pathway [PATH:rno04622]
Organismal Systems; Endocrine system; Adipocytokine signaling pathway [PATH:rno04920]
Organismal Systems; Development; Osteoclast differentiation [PATH:rno04380]
Human Diseases; Cancers; Pathways in cancer [PATH:rno05200]
Human Diseases; Cancers; Viral carcinogenesis [PATH:rno05203]
Human Diseases; Cancers; Small cell lung cancer [PATH:rno05222]
Human Diseases; Infectious diseases; Hepatitis C [PATH:rno05160]
Human Diseases; Infectious diseases; Herpes simplex infection [PATH:rno05168]
Human Diseases; Infectious diseases; Epstein-Barr virus infection [PATH:rno05169]
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
RGD: 
Ensembl: 
UniProt: 
Position
3p13
AA seq 497 aa AA seqDB search
MAAASVTSPGSLELLQPGFSKTLLGTRLEAKYLCSACRNILRRPFQAQCGHRYCSFCLTS
ILSSGPQNCAACVHEGLYEEGISILESSSAFPDNAARREVESLPAVCPNDGCTWKGTLKE
YESCHEGLCPFLLTECPACKGLVRLSEKKHHTEQECPKRSLSCQHCRAPCSHADLELHYE
VCPKFPLTCDGCGKKISQEKLQDHVRTCSKCRVLCRFHAIGCSELVETEDLQDHELQRLR
EHLALLLSSFLESQASQNQVGPELLQRCQILEQKIATFENIVCVLNREVERVAVTAEACS
RQHRLDQDKIEALSNKVQQLERSIGLKDLAMADLEQKVSELEVSTYDGVFIWKISDFARK
RQEAIAGRTPAIFSPAFFTSRYGYKMCLRVYLNGDGTGRGTHLSLFFVVMKGPNDALLQW
PFNQKVTLMLLDHNNREHVIDAFRPDVTSSSFQRPVSDMNIASGCPLFCPVSKIEAKNSY
VRDDAIFIKAIVDLTGL
NT seq 1494 nt NT seq  +upstreamnt  +downstreamnt
atggctgcagccagtgtgacttcccctggctccctagaactgctgcagcctggcttctcc
aagacccttctggggacaaggttagaagccaagtacctgtgttcagcctgcagaaacatc
ctgcggaggccattccaggcccagtgtgggcaccgctactgctccttctgcctgaccagc
atcctcagctctgggcctcagaactgtgctgcctgtgttcacgaaggcctgtatgaagaa
ggcatttctattttagagagcagttcggcctttccagataacgctgcccgcagagaggtg
gagagcctgccagccgtctgtcccaatgatggatgcacctggaaggggaccttgaaagaa
tacgagagctgccacgaaggactgtgcccattcctgctgactgagtgccctgcgtgtaaa
ggcctggttcgcctcagcgagaagaagcaccacactgagcaggaatgccccaaaaggagc
ctgagctgccagcactgcagggcaccctgtagccatgcagacctggagctacactacgag
gtctgccccaagtttcccttaacctgtgatggctgtggcaagaagatctctcaggagaag
cttcaggaccatgtcagaacgtgcagtaagtgccgggtcctctgcaggttccacgccatc
ggctgctcggagctggtggagactgaggacctgcaggaccacgagctgcagcgtctacgg
gaacatctggccctactgctgagctcgttcctggagtcccaagcctcacagaaccaggtg
gggccagagctgttacagcggtgccagattttggagcagaagatagccacctttgagaac
attgtctgcgttttgaaccgggaggtagagagggtagcagtgactgcagaggcttgtagc
cggcagcaccgtctggaccaggacaagattgaggccctaagcaacaaggtgcagcagctg
gagaggagcatcggcctcaaggacctggccatggctgacctggagcagaaggtctcagag
ttggaggtgtccacctatgatggggtcttcatctggaagatctccgacttcgccagaaaa
cgtcaggaagccatcgctggccggacacctgctatcttctccccagccttcttcacaagc
agatatggctacaagatgtgtctccgggtctacttgaatggcgacggcactgggcgggga
actcatctgtctctcttcttcgtggtgatgaaaggtcccaatgatgctctcttacaatgg
ccttttaatcagaaggtgactttgatgttgctggaccataacaaccgagagcatgtgatc
gacgcattcaggcctgatgtaacttcgtcctccttccagaggcctgtcagtgacatgaat
atcgccagtggctgccccctcttctgcccggtgtccaagatagaggccaagaattcctac
gtgcgggatgacgccatcttcatcaaagctattgtggacctgacaggactctag

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