KEGG   Rattus norvegicus (rat): 313166
Entry
313166            CDS       T01003                                 
Symbol
Nfx1
Name
(RefSeq) transcriptional repressor NF-X1
  KO
K12236  transcriptional repressor NF-X1
Organism
rno  Rattus norvegicus (rat)
Pathway
rno05165  Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:rno00001]
 09160 Human Diseases
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    313166 (Nfx1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:rno03000]
    313166 (Nfx1)
   04121 Ubiquitin system [BR:rno04121]
    313166 (Nfx1)
Transcription factors [BR:rno03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    313166 (Nfx1)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   NFX1 proteins
    313166 (Nfx1)
SSDB
Motif
Pfam: zf-NF-X1 R3H
Other DBs
NCBI-GeneID: 313166
NCBI-ProteinID: NP_001019955
RGD: 1310277
Ensembl: ENSRNOG00000009015
UniProt: D4AE50 A6IIT2
Position
5:60900140..60958889
AA seq 1114 aa
MAEAPPVSGTFKFNTDAAEFIPQERKNSGLNCGTQRRLDSNRIGRRNYSSSPPCHLPRHI
PYDDVSAVHQHGYASGSKPKSPQGFFQSSNKSLKNHGLQNQPWQKLRNEKHQNRIKKAQG
LTEQTSDTSSLESVARSESGTNPREHSPSESEKEVVIADPRGAKPKKATQLTYNYGRGPK
AKGRLRSEWGNRMSPKSEDENARPVAISHSDSSEASCRKPVVDPCVCRRSEQRRYPQKRP
PWEVEGARPRPGRNPPKQESQRHINAGPKNNMPPLPKDNLRERPTKSACDTGNLAVVTKS
SRRVDQEKNAGRRQDPQVLSPFPRGKQNHMLKNVETHTGSLIEQLTTEKYECMVCCELVQ
VTAPVWSCQSCFHVFHLNCIKKWARSPASHADGQSGWRCPACQNVSAHVPSTYTCFCGKV
KNPEWSRNEIPHSCGEVCRKKQPGQDCPHSCNLLCHPGPCPPCPAFTTKTCECGRTRHTV
RCGQPVSVHCSNVCENILNCGQHRCAELCHAGQCQPCRIILNQVCYCGSTSRDVLCGTDV
GKSDGFGDFSCLKICGKDLKCGSHTCSQVCHPQPCQPCPRLPHLVRYCPCGQTPLSQLLE
HGSNGRKTCMDPVPSCGKVCGKPLSCGSSDFIHTCEKLCHEGDCGPCSRTSVISCRCSFR
TKELPCTSLKSEDATFMCDKRCNKKRLCGRHKCNEICCVDKEHKCPLICGRKLRCGLHRC
EEPCHRGNCQTCWQASFDELTCHCGASVIYPPVPCGTRPPECTQTCARIHECDHPVYHSC
HSEEKCPPCTFLTQKWCMGKHELRSNIPCHLVDISCGLPCSAMLPCGMHKCQRLCHKGEC
LVDEACKQPCTTPRADCGHPCMAPCHPSLPCPVTACKAKVELQCECGRRKEMVICSEASG
TYQRIAAISMASKITDMQLGDSVEISKFITKKEVQQARLQCDEECAALERKKRLAEAFDI
TDDSDPFNVRSSASKFSDSLKDDARKDFKFVSDIEKEMEALVEAVNKGKSNKKSYCFPPM
NRDHRRIIHDLAQVYGLESVSYDSEPKRNVVVTAIRGKSICPPTTLTSVIERETQTRPPP
PIPHHRHQADKNPGSSNLQKIVKEPVIDYFDVQD
NT seq 3345 nt   +upstreamnt  +downstreamnt
atggcggaggcgcctccggtctcaggcacttttaaatttaatacagatgctgctgagttc
attccgcaggagagaaaaaattctggtctaaattgtgggacccaaagaagactagattct
aataggattggcagaagaaattatagttcctcacctccctgccaccttcctagacacatc
ccttacgatgatgtctctgctgttcaccagcacggttatgcctccggaagcaagcctaag
agtccacagggttttttccagtcatctaataaatcactcaagaaccatgggcttcagaat
cagccatggcagaaattaaggaatgaaaagcaccaaaacagaatcaagaaagcacaaggg
ctcactgagcagacgtcagatacatccagtttagaaagcgtagccagatccgagagtgga
acaaaccctagagaacacagcccttctgagagcgagaaggaggtagttattgcagatccc
aggggagcgaaacccaaaaaagccacgcagcttacatacaactatggccgagggccaaag
gccaaagggagactcagaagcgagtggggtaacagaatgagcccaaagtctgaggatgaa
aatgccagacctgtggccatttcccactctgactcttcagaagcctcctgtagaaaacct
gtagtggatccatgtgtgtgcagacggagtgagcagagaagatatccccagaaaaggcct
ccctgggaagtagagggggccagaccacggccaggcaggaacccaccgaaacaggagagt
cagcggcatataaatgcagggcccaaaaacaacatgcccccccttccaaaggataatctc
agagagaggccaacgaagtcagcctgtgacactgggaatttggcagttgtcaccaagtct
tccagaagagttgaccaagagaaaaatgctggaaggagacaggatcctcaagtgctgtct
ccttttcccagaggcaagcagaaccatatgctgaagaatgtggaaactcatacaggttcc
ctgattgagcagctaactacagaaaagtacgagtgtatggtgtgctgcgagttggttcag
gtcacagccccggtgtggagctgccagagctgtttccatgtctttcatctgaactgcatc
aagaaatgggctcgctctccagcgtcccacgcagatggccagagtggttggaggtgcccc
gcttgtcagaatgtttctgcacatgttcccagtacctacacttgtttctgtggcaaagta
aagaaccctgaatggagcagaaatgaaattccgcacagttgtggtgaagtttgtagaaag
aaacagcctggccaggactgtccacattcctgtaatcttctctgccatcctggaccctgc
ccaccctgccctgcttttacaactaaaacatgtgaatgtggacggaccaggcacacggtt
cgctgtggtcagcctgtctcagtccactgttctaatgtgtgtgagaatattttgaactgt
ggtcagcaccgctgtgctgagctgtgccatgcgggtcagtgccagccttgccggatcata
ttgaaccaggtgtgctactgtggcagcacctcccgagatgtgttgtgtggaaccgatgtg
ggcaagtctgatggatttggggacttcagctgtttaaagatatgtggcaaggacttgaaa
tgtgggagccatacctgttctcaggtttgccaccctcagccctgtcagccttgcccaagg
ctcccccatttggtgcgatattgcccttgcggccaaacacctctcagccagttgctggaa
catggaagtaatggtcggaagacgtgcatggatcctgttccttcctgtggaaaagtgtgt
ggcaaacccttgtcctgtgggtcctcagatttcatccacacctgtgaaaagctctgccat
gagggagactgtgggccgtgctcgcgcacatcagtcatttcctgcagatgctccttcaga
acaaaggagctcccgtgtaccagtcttaaaagtgaagatgctacattcatgtgtgacaag
cggtgtaacaagaaacgattgtgtggacggcataaatgtaacgagatctgctgtgtggac
aaggagcacaagtgtcctttgatttgtgggaggaaactccgttgtggccttcatcggtgt
gaagaaccttgtcaccgagggaactgtcagacctgctggcaagccagctttgatgaatta
acctgccattgtggcgcctctgtgatctacccaccagttccctgtgggactaggcctcct
gagtgtacccagacctgtgcgaggatccatgaatgtgaccatccagtatatcattcttgt
catagtgaggagaagtgtcccccttgtactttcctaactcagaagtggtgcatgggcaag
catgagttacgaagcaacatcccctgtcacctggttgatatctcttgcggattaccctgc
agtgccatgctaccctgtgggatgcacaaatgtcaaagactctgtcacaaaggagaatgt
cttgtggatgaggcctgcaagcagccctgtaccacacccagagctgactgtggccaccca
tgtatggctccctgccaccccagtttaccctgccctgtgacagcttgtaaagccaaggta
gagttacagtgtgaatgtggaagaagaaaggagatggtgatttgctctgaagcatccggg
acttatcaaaggatagctgccatttcgatggcctctaaaataacggacatgcagcttgga
gactcagtggagatcagcaagttcattaccaagaaggaagtccaacaagccaggttgcag
tgtgatgaggagtgtgctgccctggaaaggaaaaagagattggcagaggcattcgacatc
actgatgactctgatcctttcaacgtacgctcttcagcatcgaaattcagtgacagcctg
aaagacgatgccaggaaagacttcaagtttgtcagtgacatcgagaaggaaatggaagcg
cttgtggaggccgtgaataagggaaagagtaataagaaaagctactgcttccctcccatg
aacagagaccaccgccgcatcatccatgacctagcccaggtttatggcctggagagtgtg
agctatgacagtgaaccaaagcgcaatgtcgtggtcactgccatcagagggaagtccatc
tgtcctcctaccacgctgaccagtgttattgaaagggagacacagacacggcctccacca
ccaattcctcatcaccgacaccaagcagacaagaatcctgggagcagtaatttacagaag
atcgtgaaggagcctgtgattgactactttgacgtccaggactga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   RefSeq(pep) (4)   
DNA sequence (6)   
   RefSeq(nuc) (4)   
   GenBank (1)   
   EMBL (1)   
Protein domain (2)   
   Pfam (2)   
All databases (25)   

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