KEGG T01003: 313387

Rattus norvegicus (rat): 313387

Entry

313387 CDS T01003

Gene name

Usp1

Definition

ubiquitin specific peptidase 1 (EC:3.4.19.12)

Orthology

K11832

ubiquitin carboxyl-terminal hydrolase 1 [EC:3.1.2.15]

Organism

rno Rattus norvegicus (rat)

Pathway

rno03460

Fanconi anemia pathway

Class

Genetic Information Processing; Replication and repair; Fanconi anemia pathway [PATH:rno03460]

SSDB

Motif

Pfam:

UCH UCH_1

Other DBs

NCBI-GI:

NCBI-GeneID:

RGD:

Ensembl:

UniProt:

Position

5q33

AA seq 784 aa
MPGVIPSESNGLSRGSPSKKNRLSLKFFQKKETKRALDFTDSQEDEEKASEYRGSEIDQV
VPAAQSSPVSCEKRENLLPFVGLNNLGNTCYLNSILQVLYFCPGFKAGVKHLFNIISRKK
EALKDDSIQKDKGSCKEDPLASYELICSLQSLIISVEQLQASFLLNPEKYTDELATQPRR
LLNTLRELNPMYEGYLQHDAQEVLQCILGNIQETCQLLKKEEIKNLTEFSSKVEEKSLQK
EETGGISSTETDSTRNLDDLKEQLPKGNWKRKSDGESGNMKKKVKLSRESQPLEENQRQT
RSKRKATGDTLEASPKIIPKCVSENESAKPSQKKSKVKINWLKPATKQPSILSKFCSLGK
ITTNQRSKGQPKVNEGDLEEDLEKDGRDNTVNGSGPASPGSSVTPVDSSEAKSINKGAEQ
IGFELVEKLFQGQLVLRTRCLECESLTERREDFQDISVPVQEDELSKVEESSEISPEPKT
EMKTLRWAISQFASVERIVGEDKYFCENCHHYTEAERSLLFDKMPEVITIHLKCFAASGL
EFDCYGGGLSKINTPLLTPLKLSLEEWSTKPTNDSYGLFAVVMHSGITISSGHYTASVKV
TDLNSLELDKGNFVVDQMCEIGKPEPLNEEEARGTAENYDDEVSIRVGGNAQPSKVLNKK
NVEGIGLLGGQKSKADYELCSKASNPEKVVGTPFTDSRNSETNDTNGTQESDRSKESSDQ
TGINVSGLENKISYVVQSLKEYEGKWLLFDDSEVKVTEEKDFLNSLSPSTSPTSTPYLLF
YKKL

NT seq 2355 nt +upstreamnt +downstreamnt
atgcctggcgtcatacctagtgaaagtaatgggctttcaagaggcagtccatccaagaag
aacaggctgtctttgaagttttttcagaaaaaggaaactaaaagagccttagacttcact
gattctcaagaagatgaagaaaaagcttctgaatatagaggatctgagattgatcaagtt
gttcctgctgcacagtcctcaccagtaagctgtgagaagagagaaaacttgttaccgttt
gtgggactgaataaccttggcaacacttgttatctgaatagtattcttcaggtgttgtac
ttttgtcctggcttcaaggctggagtgaagcacttatttaatattatttcaaggaagaaa
gaagctctgaaggatgactctattcagaaggataagggaagctgcaaagaagatcctttg
gcaagttatgagcttatatgcagtttacagtccttaataatctcagttgaacagcttcaa
gctagttttctcttaaatccagaaaaatatacagatgaacttgcgacacagccaaggcga
ctgcttaacaccctgagggaactcaaccctatgtatgaaggctatctccagcacgatgca
caggaagtgctacagtgtattctgggaaacattcaagaaacatgccaactcctaaaaaaa
gaagaaataaaaaacttgactgaattttccagcaaggttgaagaaaaatctcttcagaaa
gaggagacaggtgggattagcagcacagagactgacagtacgaggaatctggacgacctc
aaagaacaactcccaaaagggaactggaaaagaaagagtgacggagaatcggggaacatg
aagaaaaaggttaaactgtccagggaatcccagccattggaagaaaaccagagacaaacc
agatcgaaaagaaaagctaccggagacacactagaggcttctcctaaaatcatccccaag
tgtgtttctgaaaatgagagtgcaaagccctcacagaagaaatccaaagttaaaataaat
tggttaaagccggccactaagcagcccagcattctttccaagttctgtagtcttgggaaa
ataacaaccaaccagcgctccaaagggcaacctaaagtaaacgagggtgaccttgaggag
gatttggagaaggatggacgcgacaacacagttaatggtagtggacccgcatctccagga
agtagcgtcacacctgtggacagtagtgaagctaagtccataaacaaaggtgcagagcag
attggttttgaactagtagagaaattgtttcaaggtcagctagtactgaggactcgttgt
ttggaatgtgaaagcttaacagaaagaagagaagactttcaggatattagtgtcccggta
caagaagatgaactttctaaagtcgaggagagctctgagatttctccagagccaaaaaca
gaaatgaagaccctgagatgggcaatttcacagtttgcttcagtggagagaattgtagga
gaggataaatatttctgtgaaaattgccatcattatacggaagcagagcgaagtctcttg
tttgataaaatgcctgaagttatcactattcatctgaagtgctttgctgctagtggcttg
gagtttgattgttatggtggtggactttccaagatcaacactcctttattgacacctctt
aaactgtcactagaagaatggagcacaaagccgactaatgacagctatggattatttgct
gttgtgatgcacagtggcattactattagtagtgggcactatactgcatctgttaaagtc
actgaccttaacagtctagaactagataagggcaattttgtggttgaccagatgtgtgag
ataggtaagccagagccactgaatgaggaggaagcaagggggacggctgaaaattatgac
gacgaagtatcaattagagttggtggtaatgcccagccaagtaaagttttgaacaaaaaa
aatgtagaaggtattggacttcttggaggacagaagagcaaagcagattatgagctgtgc
agcaaagcatctaatcctgagaaagttgtcgggacaccattcactgacagtagaaattct
gaaactaatgatactaacgggacccaggaatctgacaggagcaaggagtccagtgaccaa
acaggcattaacgtgagtggactggagaacaaaatttcctatgtagtgcaaagcttaaag
gagtacgaggggaagtggttgctctttgatgactctgaagtaaaagttacagaagagaaa
gactttctgaattctctttccccttctacatctcctacatctactccctacttgctattt
tataaaaaactatag

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (2)   
   UniGene (1)   
   ENSEMBL-RNO (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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