KEGG   Rattus norvegicus (rat): 361243
Entry
361243            CDS       T01003                                 
Symbol
Cdkal1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform 1
Organism
rno  Rattus norvegicus (rat)
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM
Other DBs
NCBI-GeneID: 361243
NCBI-ProteinID: NP_001389100
RGD: 1310246
Ensembl: ENSRNOG00000018381
Position
17:34927221..35479827
AA seq 578 aa
MPSASCDVLLDDIEDIISQEDSKPQDRHFSRKHVFPKVRRRNTQKYLQEEPSPPSDSTIP
GIQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITENASDADLWLLNSCTVKNPAEDHFRN
SIKKAHEENKKVVLAGCVPQAQPRQDYLKGLSIIGVQQIDRVVEVVEETIKGHSVRLLGQ
KKESGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTYCKTKHARGNLASYPIDELVER
AKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVEVIPEGAMLRLGMTNPPYILEH
LEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVADFKRVVDFLKEKVPGITIATD
IICGFPGETDQDFQETVKLVEEYKFPSLFINQFYPRPGTPAAKAKQVPAHVKKQRTKDLS
RVFHSYNPYDHKIGERQQVLVTEESFDSKFYVAHNRFYEQVLVPKNPAFMGKMVEVDIYE
SGKHFLKGQPVSETRVYTPSICKPLAKGEVSGLTTEFRNRLGDRLNSTSGTCPAPPQGSA
CSRMALQTSQYDCALKVAAGLALIALLLHFWPESMFTM
NT seq 1737 nt   +upstreamnt  +downstreamnt
atgccttctgcatcctgtgatgtactgctggatgacatagaagatatcatatcacaggaa
gattcaaagccacaagatagacatttctcaagaaagcatgtgtttcctaaagtacggagg
cggaatacccaaaaatatttgcaagaagagcccagcccaccaagtgacagcacgattcca
ggcatacagaaaatttggatacgaacatggggctgctcacataataattcagatggagaa
tacatggctggacagcttgctgcctatggctataaaattacagaaaatgcatcagatgca
gatctgtggctcctgaacagctgcactgtgaagaacccagctgaagaccacttcagaaac
tcaatcaaaaaagctcacgaggagaataagaaagttgtcctcgctggctgtgttccccaa
gcccagcctcgtcaggattacctcaaaggactgagcatcattggggttcagcagatagat
cgtgtggtagaagttgtggaggaaacaataaaaggtcactccgtgaggctcctgggccag
aagaaagaaagtgggaagcggttgggtggagcgagactggatttgccaaagatcaggaag
aatccgctgatagaaatcatatccatcaacacggggtgtctcaatgcttgtacctactgc
aaaactaaacatgccagaggaaacctggccagctatcccattgatgaacttgtagagaga
gccaagcagtcctttcaagagggtgtttgtgagatatggctgaccagcgaggacaccggg
gcctatggcagagacattggcacagatctccccacactcctgtggaagctggtggaagtg
attcctgagggagccatgctgaggcttggcatgacaaatccaccgtatattttagagcat
ctggaggaaatggcaaaaatcctcaaccaccccagagtctacgcttttctccacatcccg
gtgcagtctgcctctgacagtgtgctcatggacatgaagagagagtactgcgtggccgac
ttcaaaagagttgtggattttctcaaggagaaggttcctggaataacgattgctacggat
attatctgtggttttcctggagaaaccgatcaggattttcaagaaaccgtgaaacttgtt
gaagagtacaaatttccaagcctcttcatcaaccagttctatccaagacccggaaccccc
gctgcaaaagccaaacaagtcccagcacacgtgaaaaaacaaagaacaaaagatctatct
cgggtgtttcattcctacaacccatatgatcacaagattggcgaaagacaacaagtgtta
gtcacagaagagtcttttgactccaagttttatgttgcacataaccgattctatgagcag
gtcttagtgccaaagaaccctgcattcatgggaaaaatggttgaggtcgacatttatgaa
tcaggaaaacacttcttgaaaggacagccagtatcagaaaccagagtctatacaccctcc
atctgcaagccgctggccaagggagaagtctcaggtttgacaacggaattcagaaataga
cttggggatcgtctgaattcaacttcgggcacctgtcctgcacctccacagggctcggcc
tgttccagaatggcgctgcagacgtcccagtatgactgtgcactgaaggtggctgcaggc
ctggctctcatcgctctccttctgcatttctggcctgagtctatgtttacaatgtaa

  All links  
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (10)   
   RefSeq(pep) (10)   
DNA sequence (17)   
   RefSeq(nuc) (11)   
   GenBank (3)   
   EMBL (3)   
Protein domain (1)   
   Pfam (1)   
All databases (34)   

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