KEGG T01003: 362335

Rattus norvegicus (rat): 362335

Entry

362335 CDS T01003

Gene name

Nup205

Definition

nucleoporin 205

Orthology

K14310

nuclear pore complex protein Nup205

Organism

rno Rattus norvegicus (rat)

Pathway

rno03013

RNA transport

Module

rno_M00427

Nuclear pore complex

Class

Genetic Information Processing; Translation; RNA transport [PATH:rno03013]

SSDB

Motif

Pfam:

DUF3414 DUF3880

Other DBs

NCBI-GI:

NCBI-GeneID:

RGD:

Ensembl:

UniProt:

Position

4q22

AA seq 2008 aa
MAALLAVNSAASLWGPYKDIWQTVGNALWRRQPEAVHLLDMILKKHKPDFISLFKNPPKN
VQQHEKIQKASSEGVAIQGQQGTRLLPEQLIKEAFIISDLFDIGELSAVELLLAGEHQQP
HFPGLTRGLVAVLLYWDGKRCIANSLKTLIQSRRGKTWTLELSPELVSMTTRFTDELMEQ
GLTYKVLTLVSQIDVNNEFEKLQRDRGLGSEKHRKEVSDLIKECRQSLAESLFAWACQSP
LAKDDTLLLIGHLERVTVEANGSLDAVNLALLMALLYCFDTSFIEQSTEERDDMIHHLPL
LTERQYIATIHSRLQDSQPWKLPGLQATVRLAWALALRGISQLPDVTALAEFTEADEAIA
ELAIADNVFLFLSESVVLAENFYQEEFYIRRIHNLITDFLAFMPMKVKQLKNRADEDARM
IHMSIQMGNEPPISLRRDLEHLMLLIGELYKKNPFHLELALEYWCPSEPLQTPTVMGSYL
GVAHQRPPQRQVVLSKFVRQMGDLLPPTIYIPYLKMLQGLANGPQCAHYCFSLLKVNGSS
HVENIQGAGGSPVSWEHFFHSLLLYHEHLRKDLPSADSVQYRHLPSRGITQKEQDGLIAF
LQLTSTIITWSENARLALCEHPQWTPVVVILGLLQCSIPPALKAELLKTLAAFGKSPEIA
ASLWQSLEYTQILQTVRVPSQRQAIGIEVELNEIESRCEEYPLTRAFCQLISTLVESSFP
SNLGAGLRPPGFDPYLQFLRDSVFLRFRTRAYRRAAEKWEVAEVVLEVFYKLLRDYEPQL
EDFVDQFVELQGEEIIAYKPPGFSLMYHLLNESPMLELALSLLEEGVKQLDTYAPFPGKK
HLEKAVQHCLALLNLTLQKENLFMDLLRESQLALIVSPLEQLLQGINPRTKKADNVVNIA
RYLYHGNSNPELAFESAKILCCISCNSNIQIKMVGDFTHDQNVSQKLMAGFVECLDSEDT
EEFVRVEEGSELEKKLAAIRHETRIHILNLLITSLERSPPNLALYLLGFELKKPISTTNL
QDPGVLGCPRTCLHAILNILEKGTDGRSGPVAVQACPQLAELCYQVIYQLCACSDTSGPT
MRYLRTSQDFLFSQLQHLPFSNKEYEISMLNQMSWLMKTASIELRVTSLNRQRSHTQRLL
HLLLDDLPVKPYSDGEGGMEDENRSVSGFLHFDTATKVRRKILSILDSIDFSQEIPEPLQ
LDFFDRAQIEQVIANCEHKNLQGQTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEIS
TILQYVVGRNKLLQCLHAKRHALESWRQLVEIILTACPQELIQAEDRQLIIRDILQDVHD
KVLDDEAAQELMPVVAGAVFTLTAHLSQAVRTEQKQPLVSGPAEAHYAFMLDSSFTSAPA
AESQPVGFASIGDSSLHIILKKLLDFILKTGGGFQRVRTHLYGSLLYYLQIAQRPDEPDT
LEAAKKTMWERLTAPEDVFSKLQRENMAIIESYGAALMEVVCRDACDGHEIGRMLALALL
DRIVSVDKQQQWLLYLSNSGYLKVLVDSLLEDDRTLQSLLTPQPPLLKALYTYESKMAFL
TRVAKLQQGSLELLRSGVIVRLAQCQVYDMRPEVDSHSMFGMRDPPIFIPTPVDRYRQIL
LPALQLCQVILTSSMSQHLQAAGQVLQFLVSHSDTIQAILRCQDVSAGSLQELALLTGII
SKAALPGMLNELDVDVNEGSLMELQGHIARFQRQCLGLLSRFGGSDRLRQFKLQEDNVEG
DRLSKKDEIELAMQQICANVMEYCHSFMQQNSPNLQNAVCLFTPSLSETVNRDGARQDTQ
VPVVPYWRLPGLGIIIYLLKQSASDFFSYYDSHRRSVNKLQNVEQLPPDEIKELCQSVMP
AGIDKISTAQKCVLARRRLVKLINNRAKLLSLCSYIIETCLFILWRHLEYYLLHCTPMDS
QDSLFASRTLLKSRRLQEPNLDFSRSGLAQVNQHDIDQLQSDAINAFGESLQKKLLDIEG
LYSKVRSRYSFIQALVRRIRGLLRISRN

NT seq 6027 nt +upstreamnt +downstreamnt
atggcggcgctgttggcggtaaattcggctgccagcctatggggaccctacaaggacatc
tggcagacagtcggaaatgctctttggagaagacagcctgaagctgtccacctccttgac
atgattttgaagaaacacaaacccgacttcatttcactatttaaaaacccaccaaaaaat
gttcaacagcatgaaaagattcagaaagccagttcggagggtgtcgccattcaggggcaa
caaggaaccagacttctccctgagcaactcattaaagaagcatttatcatcagtgacctt
tttgacattggggaattgtcagctgttgagcttctccttgctggagaacatcagcaacca
catttccctggcctcaccagaggattggtagctgtccttttatactgggatggaaagcgg
tgcattgcaaactctctcaaaaccctaatacagtctagacgagggaagacatggacatta
gaactcagtccagagctggtttccatgacaacacgctttacagatgagctgatggaacaa
ggattgacttacaaagtccttactttggtgtcacagattgatgtgaataatgaatttgag
aaactacagagagacagaggtttgggcagtgagaaacaccgcaaagaggtttctgatctc
atcaaggagtgcaggcagtctctggctgaaagtctttttgcttgggcttgccagtcaccg
ttagctaaagatgacaccctcctgcttattggacatttagaaagagtgacagtcgaggcc
aacggctccctggatgcagtaaatctggctctcctcatggctcttctgtactgttttgat
accagctttatagaacaaagcacagaggaacgagatgatatgattcaccaccttcccctg
ttgacagagagacagtacattgccacaattcactctcgcctccaggactcccagccttgg
aagctacctgggctgcaggccactgttagacttgcctgggcactggcactgagggggata
tcccagctacctgatgtgacagccctggctgagttcacggaagcagatgaagcgattgca
gaactcgccattgccgataatgtcttcctgttcctcagcgagtctgtcgtgctggctgaa
aacttctatcaggaagagttttatattcgcagaatccataatcttattacagacttcctt
gcatttatgccaatgaaagtgaagcagctgaagaatcgggcagatgaagatgctcgaatg
attcacatgagtatacagatgggtaacgaaccccccatctcacttagaagggacctggaa
cacttgatgctcctgattggtgaactatataaaaaaaacccttttcatttggagcttgct
ctggagtactggtgtccctcagagcctctgcagactcccacggtcatgggctcttacctg
ggagtagctcatcagcgccctcctcagcgccaggttgtcttgtcaaagtttgttagacaa
atgggtgatctgttgccgccaactatttacattccttatttgaagatgctccagggcttg
gccaatgggcctcagtgtgcccactactgttttagcctgctcaaagtcaacggtagtagt
catgttgaaaacattcagggagcaggtggcagtcctgtttcctgggagcatttcttccac
tccttattgctctatcatgagcatctccgaaaggacctgccaagtgcagatagtgtccag
taccggcaccttccttcacgcggcatcacccagaaggagcaagatgggctgatcgctttt
ctccagctgacatctactatcattacttggagtgaaaatgctcgcctggcgctctgtgaa
catccccagtggactcccgttgtggtgattttggggctcctgcagtgcagtattcctcca
gctctcaaagctgagctactgaagacacttgcagcttttgggaagtctcctgaaattgcc
gcttctctctggcagtcattggagtacacgcagatactgcagactgtcagggttccaagc
cagaggcaagctattggtattgaggttgaactcaatgaaatagagtcccggtgtgaagag
tatcccctgactagggccttttgccagttgatcagtaccctggtggagagctcattccct
tctaatctgggtgctggcctgcgcccccctggctttgacccttatttgcagttcctgaga
gattctgtgtttctccgattccgtacaagagcttaccggagagccgctgaaaagtgggaa
gtcgctgaggttgtcctggaagtgttttataagctgttgagagattatgagccccagctt
gaagattttgtagatcagtttgtggagctacaaggagaagagatcatagcctataagcca
cctgggtttagtctgatgtaccatcttctgaacgagtcaccgatgttggaacttgccctc
agcttactggaagaaggagttaagcagcttgatacctatgctcctttccctggaaagaaa
cacctggaaaaagcagttcagcattgcctcgcactcctcaacctcactctgcaaaaggag
aaccttttcatggaccttctgagagagagtcagctggctctcatcgtctcgcctctggaa
cagctcttgcagggaattaaccctaggactaagaaggcagacaatgtggttaacatcgcc
aggtatctgtatcatggaaacagtaatcctgaattggcatttgaaagtgcaaagatcctc
tgctgtatctcttgcaattccaacattcagatcaaaatggttggcgatttcacacatgac
cagaatgtgagccagaagctgatggctggatttgtagagtgcttggatagtgaagacaca
gaagaatttgtacgtgtagaagagggctcagaattagaaaagaaattagctgcaatccgt
cacgaaacgagaatccacatcttgaatcttctcatcacatctctagaacgcagtccaccc
aatctcgccctctacctgttgggctttgaattgaagaaacccatcagtaccacgaatctg
caagacccaggagtactaggctgccctcggacgtgccttcatgccatcctgaacattctg
gagaaaggcaccgacgggaggagcggccctgtggccgtgcaggcgtgtccacagctggcc
gagctgtgctaccaggtgatatatcagttatgtgcatgctcagatacatctggtcctact
atgaggtacttgagaaccagccaggatttcttattttctcagttgcaacatctacctttc
tcgaacaaagagtatgaaatctctatgctgaatcaaatgtcatggcttatgaagactgcc
tcaatagagctaagagtgacgtctctgaatcgccagcgctcacacacacagaggcttctg
catctcttactggatgacctgccggtgaagccgtactctgatggtgaaggaggaatggaa
gatgaaaatagatctgtctctgggttccttcattttgacactgccacaaaagtgcgtcga
aaaattctaagtattcttgattcgattgacttcagtcaggagattcctgagcctttgcag
ctggatttttttgaccgtgcccagattgagcaagtcattgccaattgtgagcacaagaat
ttacaggggcagacggtctgcaatgtcaagcttcttcatagggttctcgtagctgaagtc
aatgctcttcagggtatggcagcaataggccagaggccgctgctgatggaggaaatcagc
actattcttcagtatgtcgtaggaagaaacaagttgctgcagtgtcttcatgcaaagcgg
catgcactggaatcctggaggcagctggtagaaattatcctgacagcttgtcctcaggag
ctcattcaggcagaagatcggcagctgattattcgtgacattttacaagatgtgcatgat
aaggtgctggatgatgaagccgcacaggagctaatgccagtggttgccggtgctgtgttc
accctgactgctcacctaagccaggctgtgcgcacggaacagaagcagccattggtctca
ggacctgcagaggcccattatgctttcatgcttgatagttctttcacctcagctcctgca
gcagagagccagccggtgggctttgcttctattggagattcttcacttcatatcatactg
aagaaactgttggacttcattttgaagacaggtggtggcttccagcgtgtaaggactcac
ctgtatggctcgctgctttattacttacagattgcccagagaccagatgagccggacaca
ttagaagctgctaagaaaactatgtgggaaaggctgactgcccctgaagatgtgtttagt
aaattacagcgagaaaacatggctatcattgagagttacggcgctgcgctcatggaggtg
gtctgtcgagatgcttgcgacggtcatgagattggaaggatgctggccctggctctcctt
gatcggattgtctctgtggacaagcagcagcagtggctcttgtacctttctaacagtggc
tatttgaaggtccttgtagacagcttgctggaagatgatcgcactctacagagcttgctg
actccacagcctcctctcttaaaagccctttatacctatgagtccaagatggcatttctc
acaagagtggctaagctacagcaaggttcattagaactcctaagatcaggggtgattgtg
aggctggcacagtgccaagtctatgatatgcgcccagaagtggactctcatagcatgttt
ggcatgagagacccaccaatattcatcccaacgcctgtggaccgataccggcagattctc
cttccagccctccagctatgccaggtcatcctcacatccagtatgtcccagcacttgcag
gcagcagggcaggtgctgcagtttctcgtttcacattctgataccatccaagcgattctg
cgctgccaggatgttagtgctggctctttgcaggaattagccctgctgacaggaatcata
agtaaagcagcgcttcctggtatgttaaatgaacttgatgtagatgtaaatgaaggatcc
ttaatggagctccagggacacatcgcaaggtttcagcgccagtgcctaggcctactgagt
cgcttcggtggctctgacagactgcggcagtttaaactccaagaagataatgtggaggga
gacaggttgagcaagaaagatgaaattgagctggccatgcagcagatttgtgccaatgta
atggaatattgccattcgttcatgcagcagaactcccctaacctccagaatgctgtgtgt
ctcttcacccctagcctttccgagacggttaacagagatggagcacggcaagatacccag
gttccagtcgttccatactggcgcctgcctggcttgggcattattatctacctgctgaaa
cagagtgccagcgatttctttagctattatgacagtcaccgtcgcagtgtcaacaagctg
cagaatgtagaacaacttcctccagatgagataaaagagttatgccagtctgtgatgcct
gctggcattgataaaatctctacggcgcagaagtgtgtcttagcaagacggcgtctggtg
aagctgatcaacaaccgagccaaactgctgtccctctgctcttatatcatcgagacctgc
ctgtttattctttggcgccatctggagtattacttgttacattgcactccaatggattcc
caagattcactgtttgcctctaggactttacttaaaagcagaagactacaggagcccaat
ctggacttcagcagaagtggactggctcaagtgaaccagcacgatatagaccagctgcag
tctgatgccatcaacgcttttggagaatcactgcaaaagaaactgcttgacatcgaaggg
ttgtattcaaaagttcgatcccgctatagcttcatacaggctcttgtcagacgtatccgt
ggtctgctgaggatatcaaggaactga

All links

Pathway (2)   
   KEGG PATHWAY (1)   
   KEGG MODULE (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   UniGene (1)   
   ENSEMBL-RNO (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (15)   

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