KEGG   Rattus norvegicus (rat): 366783
Entry
366783            CDS       T01003                                 
Symbol
Alkbh8
Name
(RefSeq) alkylated DNA repair protein alkB homolog 8
  KO
K10770  alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:rno03016]
    366783 (Alkbh8)
Enzymes [BR:rno01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.229  tRNA (carboxymethyluridine34-5-O)-methyltransferase
     366783 (Alkbh8)
Transfer RNA biogenesis [BR:rno03016]
 Eukaryotic type
  tRNA modification factors
   Methyltransferases
    366783 (Alkbh8)
SSDB
Motif
Pfam: 2OG-FeII_Oxy_2 Methyltransf_11 ALKBH8_N Methyltransf_25 RRM_1 Methyltransf_23 Methyltransf_12 Methyltransf_31 Methyltransf_8 Ubie_methyltran 2OG-FeII_Oxy MetW
Other DBs
NCBI-GeneID: 366783
NCBI-ProteinID: NP_001178838
RGD: 1304687
Ensembl: ENSRNOG00000024525
Position
6:complement(6121402..6198226)
AA seq 664 aa
MNINHEGVLKLTKMEKKFLRKQSKARHVLLKHEGIQAVSYPTQSLVIANGGLGNAVSRKQ
LLLTLEKCGPVEALLMPPNKPYAFVIFQTIEESKKAYSILNGKEIIDDLGQKIFLYLNFV
EKAQWKKLGLQALPPGLLVVEEIISSEEEKMLLESVNWTEDTGNQHFQRSLKHRRVKHFG
YEFHYENNTVDKDKPLPGGLPEICSSILEKLLKEGYIKHKPDQLTINQYEPGHGIPAHID
SHSAFEHEIVSLSLGSAIVMDFKHPEGVTVQVMLPRRSLLVMTGESRYLWTHGITPRKFD
TIQASEQFKGGIINSDIGDLTLSKRGMRTSFTFRKVRRIPCNCSYSSVCDRQRKATPPSL
LESSKEALELEQKHVHHVYDEIASHFSSTRHSPWPRIVEFLKALPSGSIVADIGCGNGKY
LGINKELYMIGCDRSRNLVDICRERQFQALVCDALAVPVRSGSCDACISIAVIHHFATAE
RRVEALQEIARLLRSGGQALIYVWAMEQEYRDQKSKYLKGNRISQGDKGELNSATSMEQL
LVNQMPEGVSEDPGLSVHSSNNTKDEECKSRKVLNSELPIHTNRTCFHSQDVLVPWHLKG
KPGKDKAVEQSGLARCPDPRPVFHRYYHVFCNGELEASCQAVGDVSILQSFYDQGNWCVV
LQKV
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgaatatcaatcatgaaggtgttttgaaactcactaaaatggagaagaagttcttaagg
aaacagagtaaagccagacatgtgttgctgaaacatgaaggcatccaggcagtctcttat
cccactcagagcctggttattgccaatggtggtctgggtaatgctgtgagtaggaaacaa
ctgcttttgactttagagaagtgtggacctgtggaagccctcctcatgccacctaataag
ccatatgcatttgtcatattccaaactattgaagaatccaagaaagcctattctattctc
aatggaaaagaaatcattgatgatttggggcagaagatctttctgtacttgaattttgtt
gaaaaagcacaatggaaaaaattgggacttcaagccttacctccaggccttttggtggta
gaagaaattatttcttctgaggaggagaaaatgcttttggaaagtgttaattggacagaa
gatacaggtaatcagcattttcaaaggtccttaaaacacagaagagtaaaacattttggt
tatgaatttcactatgagaacaacactgtggataaagataagcccttacctgggggtctt
cctgagatttgcagtagcattttggagaagttgttgaaagaaggttatattaaacataag
ccagaccagttgaccataaatcagtatgagcctgggcatggaattcctgcccatattgac
tcgcattctgcttttgaacatgagattgtttccctcagtttggggtcagcgattgttatg
gatttcaagcacccagagggtgtcacagtacaagttatgttacctcgtcggagtttgctg
gtaatgacgggagagtctagatacctttggactcatggaattacacctcgaaaatttgat
accatccaagcatctgagcaattcaaaggtggaataatcaacagtgacattggagacttg
actttaagcaagagggggatgcgcacatcgtttacgtttaggaaagtgaggcgaataccg
tgcaattgtagttactcctccgtctgtgacagacaaaggaaggccacacctccatccctt
ttggagagcagtaaagaagcactggagctagagcaaaagcatgtccatcatgtgtacgat
gagattgcaagtcacttcagcagcacgaggcatagcccatggccacgcatagtagagttc
ctgaaagctttgccaagtggttccatagtggcagatattggatgtggaaatggaaagtac
cttggcatcaacaaggagttatatatgattgggtgtgatcgtagccggaatcttgtggac
atttgtagagagaggcagttccaagccttagtgtgcgatgcactagctgttcctgtcaga
agtgggtcttgtgatgcttgtatctctattgctgtcattcaccactttgcaactgcagag
cgcagagtggaagctctccaagaaattgcccgtctcctgagatctggtgggcaggccctc
atttatgtctgggcaatggaacaagaatatagagatcagaagtccaagtatcttaaagga
aacagaattagccaaggcgataaaggtgaactaaacagtgccacatccatggaacaattg
ctagtaaatcaaatgcctgagggagtcagtgaagacccaggattgtctgtccactccagt
aataacaccaaggatgaagagtgtaagtcaaggaaagttcttaattctgaacttcctatt
catacaaataggacctgttttcattcccaagatgtgctggttccttggcacctcaaagga
aagcctggtaaagacaaagctgttgaacagtcaggcctagccagatgtcctgacccacgt
cctgtgtttcatcgttattaccatgttttctgtaatggagagttggaagcttcctgccag
gctgtgggtgatgttagcattctgcagagcttctatgaccaagggaactggtgtgttgtt
cttcaaaaggtctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (11)   
   RefSeq(pep) (11)   
DNA sequence (13)   
   RefSeq(nuc) (11)   
   GenBank (1)   
   EMBL (1)   
Protein domain (12)   
   Pfam (12)   
All databases (47)   

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