KEGG R.norvegicus: 54234

Rattus norvegicus (rat): 54234

Entry

54234 CDS R.norvegicus

Gene name Cacna1e

Definition calcium channel, voltage-dependent, R type, alpha 1E subunit

Orthology K04852 calcium channel, voltage-dependent, R type, alpha 1E subunit

Pathway rno04010 MAPK signaling pathway
rno04020 Calcium signaling pathway
rno04930 Type II diabetes mellitus

Class Environmental Information Processing; Signal Transduction; MAPK
signaling pathway [PATH:rno04010]
Environmental Information Processing; Signal Transduction; Calcium
signaling pathway [PATH:rno04020]
Environmental Information Processing; Signaling Molecules and
Interaction; Receptors and channels
Human Diseases; Metabolic Diseases; Type II diabetes mellitus
[PATH:rno04930]

SSDB

Motif Pfam: Ion_trans Ca_chan_IQ PKD_channel
PROSITE: SER_RICH EF_HAND_2

Other DBs NCBI-GI: 145553966
NCBI-GeneID: 54234
RGD: 2246
RATMAP: ENSRNOG00000002863
Ensembl: ENSRNOG00000002863
UniProt: Q923K6

Position 13q21

AA seq 2295 aa
MARFGEAVVVGRPGSGDGDSDQSRNRQGTPVPASGPAAAYKQSKAQRATMALYNPIPVRQ
NCFTVNRSLFIFGEDNIVRKYAKKLIDWPPFEYMILATIIANCIVLALEQHLPEDDKTPM
SRRLEKTEPYFIGIFCFEAGIKIVALGFIFHKGSYLRNGWNVMDFIVVLSGILATAGTHF
NTHVDLRTLRAVRVLRPLKLVSGIPSLQIVLKSIMKAMVPLLQIGLLLFFAILMFAIIGL
EFYSGKLHRACFMNNSGILEGFDPPHPCGVQGCPAGYECKDWIGPNDGITQFDNILFAVL
TVFQCITMEGWTTVLYNTNDALGATWNWLYFIPLIIIGSFFVLNLVLGVLSGEFAKERER
VENRRAFMKLRRQQQIERELNGYRAWIDKAEEVMLAEENKNSGTSALEVLRRATIKRSRT
EAMTRDSSDEHCVDISSVGTPLARASIKSTKVDGASYFRHKERLLRISIRHMVKSQVFYW
IVLSVVALNTACVAIVHHNQPQWLTHLLYYAEFLFLGLFLLEMSLKMYGMGPRLYFHSSF
NCFDFGVTVGSIFEVVWAIFRPGTSFGISVLRALRLLRIFKITKYWASLRNLVVSLMSSM
KSIISLLFLLFLFIVVFALLGMQLFGGRFNFNDGTPSANFDTFPAAIMTVFQILTGEDWN
EVLYNGIRSQGGVSSGMWSAIYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDEQEEE
EAFNQKHALQKAKEVSPMSAPNMPSIERERRRRHHMSVWEQRTSQLRRHMQMSSQEALNK
EEAPPMNPLNPLNPLSPLNPLNAHPSLYRRPRPIEGLPLGLGLEKCEEERISRGGSLKGD
IGGLTSVLDNQRSPLSLGKREPPWLPRSCHGNCDPTQQETGGGETVVTFEDRARHRQSQR
RSRHRRVRTEGKESASASRSRSASQERSLDEGVSIDGEKEHEPQSSHRSKEPTIHEEERT
QDLRRTNSLMVPRGSGLVGALDEAETPLVQPQPELEVGKDAALTEQEAEGSSEQALLADV
QLDVGRGISQSEPDLSCMTTNMDKATTESTSVTVAIPDVDPLVDSTVVNISNKTDGEASP
LKEAETKEEEEEVEKKKQKKEKRETGKAMVPHSSMFIFSTTNPIRKACHYIVNLRYFEMC
ILLVIAASSIALAAEDPVLTNSERNKVLRYFDYVFTGVFTFEMVIKMIDQGLILQDGSYF
RDLWNILDFVVVVGALVAFALANALGTNKGRDIKTIKSLRVLRVLRPLKTIKRLPKLKAV
FDCVVTSLKNVFNILIVYKLFMFIFAVIAVQLFKGKFFYCTDSSKDTEKECIGNYVDHEK
NKMEVKGREWKRHEFHYDNIIWALLTLFTVSTGEGWPQVLQHSVDVTEEDRGPSRSNRME
MSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKMMEECSLEKNERACIDFAISAKPLTR
YMPQNRHTFQYRVWHFVVSPSFEYTIMAMIALNTVVLMMKYYSAPWTYELALKYLNIAFT
MVFSLECVLKVIAFGFLNYFRDTWNIFDFITVIGSITEIILTDSKLVNTSGFNMSFLELF
RAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIKLDEES
HINRHNNFRSFFGSLMLLFRSATGEAWQEIMLSCLGEKGCEPDTTAPSGQNESERCGTDL
AYVYFVSFIFFCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFVRVWAEYDRAACGR
IHYTEMYEMLTLMSPPLGLGKRCPSKVAYKRLVLMNMPVAEDMTVHFTSTLMALIRTALD
IKIAKGGADRQQLDSELQKETLAIWPHLSQKMLDLLVPMPKASDLTVGKIYAAMMIMDYY
KQSKVKKQRQQLEEQKNAPMFQRMEPSSLPQEIISNAKALPYLQQDPVSGLSGRSGYPSM
SPLSPQEIFQLACMDPADDGQFQEQQSLEPEVSELKSVQSSNHGIYLPPDTQEHAGSGRA
SSMPRLTMDPQVVTDPSSMRRSFSTIRDKRSNSSWLEEFSMERSSENTYKSRRRSYHSSL
RLSAHRLNSDSGHKSDTHRSGGRERGRSKERKHLLSPDVSRCNSEERGTQADWESPERRQ
SRSPSEGRSQTPNRQGTGSLSESSIPSISDTSTPRRSRRQLPPVPPKPRPLLSYSSLMRH
TGGISPPPDGSEGGSPLASQALESNSACLTESSNSLHPQQGQHPSPQHYISEPYLALHED
SHASDCGEEETLTFEAAVATSLGRSNTIGSAPPLRHSWQMPNGHYRRRRLGGLGLAMMCG
AVSDLLSDTEEDDKC

NT seq 6888 nt +upstreamnt +downstreamnt
atggctcgcttcggggaggcggtggtcgttggcagaccaggctcaggcgatggagactcg
gaccagagcaggaaccgacaaggaacccccgtaccggcctcggggccggcggccgcctac
aagcagtcaaaagcgcagagggcgactatggctttgtacaaccccataccagtccggcag
aactgtttcacggtcaacagatccctgttcatcttcggagaagataacattgtcaggaaa
tatgccaagaaactcatcgattggccgccatttgagtacatgatcctggccaccatcatt
gccaactgcatcgtcttggccctggagcagcatcttcctgaggatgacaagaccccaatg
tcccgaagactggagaagacagaaccatattttattggaatcttctgctttgaagctggg
atcaaaatcgtggctctaggattcatcttccataagggttcgtacctccgtaacggctgg
aatgtcatggacttcattgtggtcctcagtggcatcctggccactgcaggaacccatttc
aacacccacgtggacctgcggaccctccgggctgtgcgtgtcctgaggcccttaaagctc
gtgtcaggaatacctagcctgcagatcgtgctgaagtccatcatgaaggccatggtgcct
cttctgcagattggccttctgctcttctttgccattctcatgtttgccatcattggcttg
gagttctacagtggcaagttgcatcgagcatgcttcatgaacaattcaggtattctagag
ggatttgatcctcctcacccgtgtggtgtacagggctgcccggctggttatgaatgtaag
gactggatcggccccaatgacgggatcacccagtttgacaacatcctttttgctgtgctg
actgtcttccaatgcatcactatggaagggtggaccactgtgctgtacaataccaatgat
gccttaggagccacctggaactggctgtacttcatccccctcatcatcatcggatccttc
tttgttctcaaccttgtcctgggcgtgctttccggggaatttgccaaagaaagagagaga
gtggagaaccgaagagcattcatgaagctccggcgtcagcaacagattgagcgcgagttg
aatggctaccgcgcctggatagacaaagcagaggaagtcatgcttgctgaagaaaataaa
aactcgggaacatcagccttggaagtgcttcgaagggcaaccatcaaaaggagccggacg
gaggccatgacccgagactccagcgatgagcactgcgttgatatctcttcagtgggcaca
cctcttgccagagccagtatcaagagcacaaaagtagacggagcctcctatttccggcac
aaggaacggcttctgcgtatctctatccgacacatggtcaagtcgcaagtgttctactgg
atcgtcctgagtgttgtggctctcaatactgcctgtgtggccatcgttcatcacaaccag
ccacagtggctcactcacctcctctactatgcagaatttttgtttctgggactcttcctg
ttggagatgtccctgaagatgtatggcatggggccacgcctttattttcactcatccttc
aactgctttgattttggggtcacagtgggcagcatctttgaggtcgtttgggcaatcttc
cgacctggcacatcttttggaatcagtgtcttacgagctctccggctcctaaggatattt
aaaataaccaagtattgggcatccctccggaatctggttgtttccttgatgagctccatg
aagtctatcatcagcttactcttcctcctcttcctcttcattgttgtctttgctctcctg
ggaatgcagctctttggaggcaggtttaactttaatgatgggactccttcggctaatttt
gataccttccctgcagctatcatgacagtgttccagatcctgacgggggaagactggaat
gaagtgctgtataacggcatccgctcccagggtggggtgagctcaggcatgtggtctgcc
atctacttcattgtgctcaccttgtttggaaactacacactgctgaatgtattcttggct
atcgctgtggacaatctcgccaatgcccaggaactgaccaaggatgagcaggaggaagaa
gaagccttcaaccagaaacatgcactgcagaaggccaaggaggtcagcccgatgtctgct
cccaacatgccttccattgagagggagaggagacgccgacaccacatgtctgtgtgggaa
cagcgcaccagccagctgaggaggcacatgcaaatgtctagccaagaagccctcaacaaa
gaggaggccccaccaatgaaccccctcaatccactcaacccactgagtcctctcaaccca
ctcaatgctcatcctagcctctatcggaggcccaggcccattgagggcctacccctgggc
ttgggtcttgaaaaatgtgaagaggagcgtatcagccgtggaggttctctcaagggggac
ataggtggcctgactagcgtcctggacaaccagaggagccctttgtccctgggcaaacgg
gagccaccgtggctgcccagatcctgtcatggaaactgtgacccaacccagcaggagact
gggggaggagagactgtggtgacttttgaggaccgggccaggcacaggcagagtcagagg
cgaagccggcatcgccgagtcaggactgagggcaaggagtctgcctctgcctccagaagc
aggtctgccagccaggagcggagtctggatgaaggggtgtccatcgatggggagaaggaa
cacgagcctcagagcagccacaggagcaaggagccaaccatccatgaagaagagagaact
caggacttaaggaggaccaacagtctgatggtccccaggggctcaggactggtaggagct
cttgatgaggcagaaacacctctagtccagccccaacctgagctggaagtggggaaggat
gcagctctgacagagcaggaggctgaaggcagcagcgagcaagccctgcttgcggatgta
cagctggatgtgggccggggcattagccagagtgaacctgacctctcctgcatgacaacc
aacatggacaaggctaccactgagagcaccagtgtcacagtcgccatccctgacgtggac
cccttggtggactcaacagtggtgaacattagcaacaagacggatggagaagccagtccc
ttgaaggaagcagagaccaaagaggaagaggaagaggtggaaaagaagaagcagaagaag
gagaagcgggagactggaaaagccatggtgccccatagctctatgttcatcttcagcacc
actaacccgatccgcaaggcttgccactacattgtgaatctacgctactttgagatgtgc
attctcttggtgattgcggccagcagcattgccctggcagctgaggaccctgtactaact
aactcagagcgtaacaaagtcctgagatatttcgactatgttttcacaggagtgtttacc
tttgagatggtgataaagatgatagaccaaggcttgatcctgcaggatggatcgtacttc
cgagacctctggaatatcctggactttgtggtagtggttggtgcattggtagcatttgct
ctggcgaacgctttgggaaccaacaaggggcgggatatcaagacgatcaagtctctgagg
gtacttcgagttctgcgaccactgaaaaccatcaagcgcttgcccaaactgaaggctgtg
tttgactgcgtggtgacctccttgaagaatgtcttcaacatactcattgtctacaagctc
tttatgttcatctttgccgtcattgctgttcagttattcaagggaaagttcttttattgc
accgacagttccaaggacacagagaaggaatgcataggcaactatgtagaccacgagaaa
aacaagatggaggtgaagggccgggagtggaagcgtcatgaattccactatgacaacatc
atctgggccctgctgaccctcttcaccgtctccacgggggaaggatggcctcaggttctg
cagcactcggtagatgtgacagaggaggacagaggcccaagccgcagcaaccgcatggag
atgtccatcttctatgtggtctactttgtggtcttccctttcttctttgtcaatatcttc
gtggccctcattatcatcaccttccaggagcaaggggacaagatgatggaggagtgtagc
ctagaaaagaatgagcgggcatgcatcgacttcgccattagtgccaaacctctcacccgc
tacatgccacagaacaggcacaccttccagtaccgcgtgtggcacttcgtagtctcgcca
tcctttgagtataccatcatggccatgattgccttgaacaccgttgtgctgatgatgaag
tactattctgctccttggacctatgagctcgccctaaagtacctgaacatcgccttcact
atggtgttttccctagaatgtgtcctaaaggtcatcgctttcggcttcttgaactatttc
cgagatacctggaacatctttgacttcattaccgtgatcggcagtatcacagaaattatc
ctgacagacagcaagctggtgaacaccagtggcttcaatatgagctttctggagctcttc
cgagctgcacggctcataaagcttctgcgacagggctacaccatccgcatcttactgtgg
accttcgtgcagtcctttaaggctctcccctatgtctgccttctgattgccatgcttttc
ttcatctacgctatcattgggatgcaggtgtttggaaacataaagttagatgaggagagt
catatcaaccggcacaacaactttcggagtttcttcgggtctctcatgctgcttttcagg
agcgccacaggggaggcttggcaggagattatgttgtcatgtctgggcgagaagggctgt
gagcctgacaccactgcaccctcagggcagaacgagagtgagcgctgtggcactgacctg
gcctacgtttattttgtctccttcatcttcttctgctccttcctgatgctcaacctgttt
gtggctgttatcatggacaactttgagtacctgactcgagattcgtccatcctggggcct
caccacttggatgaatttgtccgtgtctgggcagagtatgacagagcagcatgtggccgc
atccattacactgagatgtatgaaatgctgactctcatgtcaccaccgctaggcctcggc
aagagatgtccctccaaagtggcctataagaggttggtcctgatgaatatgccagtggct
gaggacatgacagtccatttcacctccacacttatggctctgatccggacagctctggac
attaaaatcgccaaaggtggtgcagacagacagcagctagactcagagctacaaaaagag
accctggccatttggcctcacctgtcccaaaagatgttggatctgctagtgcccatgccc
aaagcctctgacctgactgtgggcaagatctatgcagcaatgatgattatggactactat
aaacagagtaaggtaaagaaacagagacagcagctggaagaacagaaaaatgcacccatg
ttccagcgcatggagccctcctcactgcctcaggagatcatttctaatgccaaagccctg
ccttatctccagcaggaccctgtttctggcctgagtggtcggagtggatacccttcaatg
agtccactctcccctcaagaaatattccagttggcttgtatggacccagcggatgatgga
caattccaggaacagcaatcgctggagccagaggttagtgaattaaaaagtgtgcagtcc
tctaaccatggcatctaccttcctccggacacccaggagcatgcgggatctgggagggca
tcctctatgccacgtctgactatggatccccaggtggtaacagaccctagctctatgcga
cgttcattttctacaattcgggataagcgttcaaattcctcctggttggaggagttctcc
atggaacgtagcagtgaaaacacctacaagtcacgacgcagaagttaccattcctccctg
aggctgtcagcccaccgcctgaattctgactctggtcacaagtctgacactcaccgctca
ggaggcagggagagaggccgatccaaagaacgaaagcatctcctctctccggatgtctcc
cgctgcaattctgaggagcgaggaacccaggctgactgggagtccccagaacgtcgccag
tccaggtcacccagtgagggaaggtcacaaacccccaacagacagggtacaggttcactg
agtgagagctccattccctctatctccgacaccagcaccccaagacgaagtcgtcgccag
ctcccacctgtgccaccaaagcctcggcccctcctctcctacagctccctgatgagacac
actggcggcatctctccacctcctgatggaagtgagggtggatccccactggcctctcaa
gctctggaaagcaacagcgcttgcctaaccgagtcttccaactccttgcacccccagcag
ggccagcacccttccccacagcactacatctctgagccctatctggccctccatgaagac
tcccacgcctcagactgtggcgaggaggagacactcacctttgaggcagctgtagctact
agcttgggccggtccaataccattggctctgccccacccctacggcacagctggcagatg
cctaatgggcactatcggcggcggaggctggggggcctgggcctggccatgatgtgtgga
gctgtcagtgacctcctgagtgacacggaagaagacgataagtgctag

All links

Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (4)   
   UNIGENE (3)   
   ENSEMBL-RNO (1)   
   RATMAP-RNO (1)   
   RGD-RNO (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (1)   
   IPI (2)   
DNA sequence (5)   
   RefSeq(nuc) (1)   
   GenBank (2)   
   EMBL (2)   
Protein domain (5)   
   Pfam (3)   
   PROSITE (2)   
All databases (30)

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