KEGG   Rattus norvegicus (rat): 64159
Entry
64159             CDS       T01003                                 
Symbol
Sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1
  KO
K06114  spectrin alpha, non-erythrocytic (fodrin)
Organism
rno  Rattus norvegicus (rat)
Pathway
rno04210  Apoptosis
rno04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:rno00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    64159 (Sptan1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    64159 (Sptan1)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:rno04812]
    64159 (Sptan1)
Cytoskeleton proteins [BR:rno04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     64159 (Sptan1)
  Intermediate filaments
   Intermediate filament-binding proteins
    64159 (Sptan1)
SSDB
Motif
Pfam: Spectrin EFhand_Ca_insen SH3_1 EF-hand_1 EF-hand_7 EF-hand_6 SH3_9 EF-hand_8 SH3_2 EF-hand_5 SH3_3 SH3_10 SCO1-SenC Tetrabrachion
Other DBs
NCBI-GeneID: 64159
NCBI-ProteinID: NP_741984
RGD: 621714
Ensembl: ENSRNOG00000015396
UniProt: P16086
Structure
Position
3:33639020..33703890
AA seq 2472 aa
MDPSGVKVLETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYRFQFFQRDAEELEKWI
QEKLQVASDENYKDPTNLQGKLQKHQAFEAEVQANSGAIVKLDETGNLMISEGHFASETI
RTRLMELHRQWELLLEKMREKGIKLLQAQKLVQYLRECEDVMDWINDKEAIVTSEELGQD
LEHVEVLQKKFEEFQTDLAAHEERVNEVNQFAAKLIQEQHPEEELIKTKQEEVNAAWQRL
KGLALQRQGKLFGAAEVQRFNRDVDETIGWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVKALCAEADRLQQSHPLSANQIQVKREELITNWEQIRTLAAERHARLDDS
YRLQRFLADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFKSA
DESGQALLAAGHYASDEVREKLSILSEERAALLELWELRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
MEDVATRRDALLSRRNALHERAMHRRAQLADSFHLQQFFRDSDELKSWVNEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALEKAGQKLIDVNHYAKEEVAARMNEVISLW
KKLLEATELKGVKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTNVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQDAGHFDAENIKKKQEALVARYEALKEPMVARKQKL
ADSLRLQQLFRDVEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEIAGHEPRI
KAVTQKGNAMVEEGHFAAEDVKAKLSELNQKWEALKAKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSTDYGKDEDSAEALLKKHEALMSDLSAYGSSIQALREQAQSCRQQV
APMDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPAQSASRENLLEEQGSIALRQGQIDNQTRITKEAGSVSLRMKQVEELYQSLLELG
EKRKGMLEKSCKKFMLFREANELQQWINEKEAALTSEEVGADLEQVEVLQKKFDDFQKDL
KANESRLKDINKVAEDLESEGLMAEEVQAVQQQEVYGMMPRDEADSKTASPWKSARLMVH
TVATFNSIKELNERWRSLQQLAEERSQLLGSAHEVQRFHRDADETKEWIEEKNQALNTDN
YGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAQRLIQSHPESAEDLKEKCTELNQA
WTSLGKRADQRKAKLGDSHDLQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLER
HQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKEKLDILDQERTDLEKAWVQRRMM
LDHCLELQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEEK
IAALQAFADQLIAVDHYAKGDIANRRNEVLDRWRRLKAQMIEKRSKLGESQTLQQFSRDV
DEIEAWISEKLQTASDESYKDPTNIQSKHQKHQAFEAELHANADRIRGVIDMGNSLIERG
ACAGSEDAVKARLAALADQWQFLVQKSAEKSQKLKEANKQQNFNTGIKDFDFWLSEVEAL
LASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKEKRD
TINGRFQKIKSMATSRRAKLSESHRLHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQ
NLRKKHKRLEAELAAHEPAIQGVLDTGKKLSDDNTIGQEEIQQRLAQFVEHWKELKQLAA
ARGQRLEESLEYQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFT
VHKDRVNDVCTNGQDLIKKNNHHEENISSKMKGLNGKVSDLEKAAAQRKAKLDENSAFLQ
FNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGIANITALK
DQLLAAKHIQSKAIEARHASLMKRWTQLLANSATRKKKLLEAQSHFRKVEDLFLTFAKKA
SAFNSWFENAEEDLTDPVRCNSLEEIKALREAHDAFRSSLSSAQADFNQLAELDRQIKSF
RVASNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQHANAFHQW
IQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAMEEALILDN
KYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFKHFDKDKS
GRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGHVSLQEYMAFMISRET
ENVKSSEEIESAFRALSSEGKPYVTKEELYQNLTREQADYCVSHMKPYVDGKGRELPTAF
DYVEFTRSLFVN
NT seq 7419 nt   +upstreamnt  +downstreamnt
atggatccaagtggggtcaaagtgctggaaacagccgaggacatccaggagagacgacag
caggttctggatcggtaccaccgcttcaaggagctctctaccttgcggcggcagaaactg
gaggattcctatcgcttccagttttttcagagagatgctgaggagctggagaagtggatt
caggagaagcttcaagttgcctctgatgagaactacaaagaccccaccaacttgcaggga
aagctccagaaacaccaagcctttgaagctgaagtacaggccaactcaggagccattgtg
aagctggatgagacaggaaacttgatgatttctgaagggcactttgcatctgagaccatc
cggacacgtttaatggagctgcaccgccagtgggagttgcttttggagaagatgcgggag
aaaggaatcaaactgctgcaggcacagaagctggtgcagtatttgcgggagtgtgaggat
gtaatggactggatcaatgacaaggaagcaattgtgacgtctgaggagctgggccaggat
ttggagcatgtagaggtactacagaagaagtttgaagagtttcaaactgatctggctgct
catgaagaaagagttaatgaagtaaaccagtttgctgccaaacttatccaggagcagcac
ccggaagaggagctgatcaagaccaagcaggaggaggtgaatgcagcttggcagcgactg
aaaggcctggctcttcaaaggcaggggaagctctttggtgctgccgaggttcagcgcttt
aacagggatgtagatgagaccattggttggattaaggagaaagagcagttaatggcctct
gatgactttggcagagacttagcaagtgttcaagctctgcttcggaagcatgagggtctg
gagagagatcttgctgctctagaggacaaggtgaaagccctgtgtgccgaggctgaccgc
ctgcaacagtcacaccctctgagtgccaaccagatccaggtgaagcgagaggaactaatt
accaactgggagcagatccgaactctggccgcagagagacatgcacggcttgatgactca
tacaggcttcagcgctttcttgctgacttccgtgacctcacgagctgggtgactgaaatg
aaagccctcatcaatgcagatgaactggccaatgacgtggctggtgctgaggccctgctg
gacaggcatcaagagcacaagggtgaaatcgatgctcatgaagatagctttaagtctgca
gatgagtctgggcaggccctactcgctgctggtcactatgcctcagatgaagtgagggag
aagctgagcatcctctctgaggagagagctgccctgctggagctgtgggagcttcggagg
caacagtatgagcagtgcatggacttgcagctcttctaccgagacactgagcaggtggac
aactggatgagcaaacaggaggcattcctgctaaatgaagatttgggtgactccttagac
agtgtggaagctcttttgaagaagcatgaggactttgagaaatctctcagtgcccaggaa
gaaaaaatcacagcacttgatgagtttgcaaccaagcttattcagaacaaccactacgca
atggaagatgtagccactcgacgagatgctctcctgagccgccgcaatgccctccatgag
cgagccatgcatcgccgggcacagctggccgattccttccacctgcagcagttcttccgc
gattccgatgagctcaaaagttgggtcaatgagaagatgaaaacggccactgatgaagct
tacaaagatccgtccaacctgcaagggaaagtccaaaagcaccaggcttttgaggctgag
ctctcagccaaccagagccgtattgatgccctagagaaagctgggcaaaaactaatagat
gtgaaccactatgccaaggaagaagtagcagctcggatgaatgaggtcatcagtttgtgg
aagaaacttctagaggccacagaactgaaaggagtcaagctccgagaagccaaccagcag
caacaatttaatcgaaatgttgaggacattgagttgtggctgtatgaagttgaaggtcac
ttggcttcagatgattatggtaaagacctcactaatgtccagaacctccagaagaagcat
gctctgctagaggcagatgttgctgctcaccaggatcgaattgacggcatcacaattcag
gcccgccagttccaagatgctggccatttcgatgccgaaaacattaaaaagaagcaagag
gcccttgtagctcgctatgaggctctcaaggaacccatggtggcccggaagcagaagctg
gcagattctcttcgtctgcagcagctcttccgagatgtggaggatgaggaaacctggatt
cgagaaaaggagcctattgctgcgtccactaacagaggcaaagatcttattggagtccag
aatctgctaaagaagcaccaagctttacaggcagaaattgctggccatgaacctcgcatc
aaagcagtgacacaaaagggcaatgccatggtggaggaaggccattttgctgctgaggat
gtgaaggccaaactgagtgagctcaaccagaagtgggaggcactgaaagccaaagcctcc
cagcggaggcaggatctggaggactcactacaggcccagcagtactttgccgacgccaat
gaagctgagtcctggatgcgggagaaggagcccattgtgggcagtaccgactatgggaag
gatgaagactctgctgaggctctgctcaagaagcatgaagctttgatgtccgatctcagt
gcctacggcagcagcattcaagctttgcgagagcaggctcagtcatgccggcaacaagtg
gcccccatggatgatgagactggcaaggagctggtcttggctctctatgactatcaagag
aagagccctcgtgaggtcaccatgaagaaaggggatatcctcaccttgctcaacagcaca
aacaaggactggtggaaagtggaagtgaatgaccgtcagggttttgtgccagctgcgtat
gtgaagaagctggaccccgcccagtcagcctcaagggagaacctcctggaagaacagggc
agcattgctctgcggcaggggcagatcgacaaccagacacgcataactaaggaggccggc
agtgtatctctgcgtatgaaacaggtggaagaactgtatcagtctctgctggagctgggt
gagaagagaaaaggcatgttggagaagagttgcaagaagttcatgttgttccgggaagcg
aacgagctacagcagtggatcaacgagaaggaagctgctctaacgagtgaagaggttggc
gctgacttggagcaggtcgaggtgctgcagaagaagttcgatgacttccagaaggatctg
aaagccaatgagtcccggctgaaggacattaacaaagtggccgaggacctggagtctgaa
ggtctcatggcggaagaagtgcaggccgtgcagcagcaggaggtgtatggtatgatgccc
agggatgaagcagattccaagaccgcctccccatggaagtctgctcgactgatggtccac
acagtggccaccttcaactccatcaaggagctgaatgagcgctggcggtccctgcaacag
ctggctgaggaacgtagccagctcctgggcagtgcacacgaagtacagaggttccacagg
gatgcggatgaaaccaaagaatggattgaggagaagaaccaggctctgaacacagacaac
tatggccatgatctagctagcgtccaggccctgcagcgcaaacacgaaggcttcgagagg
gaccttgcagctcttggtgacaaggtgaattcccttggggaaacagcccagaggctgatc
cagtcccaccctgaatctgcagaggacttaaaggaaaagtgcacagagttaaaccaggcc
tggaccagcctagggaagcgtgcagaccagcgcaaggccaaactgggtgactcccatgac
ctgcagcgcttccttagcgatttccgggacctcatgtcttggatcaatggaatacgaggg
ttggtatcttcagatgaactggccaaggatgtcactggagctgaggctttgctggagcga
caccaggaacaccggacagaaattgatgccagggctggcactttccaggcatttgagcag
tttgggcagcagctgttggctcatgggcactatgccagcccagagatcaaggagaaactt
gatattcttgaccaggagcgcacagacctggagaaggcctgggttcagcgcagaatgatg
ctggaccactgcctggagttgcagctgttccatcgagactgtgagcaagcagagaactgg
atggctgcccgggaagccttcctaaacacagaagacaaaggagactcgctggacagtgtg
gaggctctgatcaaaaaacatgaagacttcgacaaagctatcaatgtccaggaggagaag
atagctgccctgcaggcctttgccgaccagctcattgctgtggaccactatgccaaggga
gacattgcaaaccgacgcaatgaggtcctggacaggtggcgccgcctaaaagcccagatg
attgagaaaaggtcaaagctcggagaatctcaaacacttcagcagttcagccgggatgta
gatgagattgaagcctggatcagtgagaagttacaaacagccagcgatgagtcatacaag
gaccccaccaacatccagagcaagcaccagaagcaccaagcctttgaggcagaactgcac
gccaatgctgaccgaatccgtggagttattgacatgggcaactccctcattgagcgtggg
gcctgtgctggcagtgaggatgctgtcaaggcccgcctggctgcccttgcagaccagtgg
cagttcctggtgcagaagtcagctgagaagagccagaagctgaaagaggccaataagcag
cagaacttcaacaccgggatcaaagactttgacttctggctttctgaggtggaggctctc
ctggcatctgaagactacggcaaagacctggcttccgtgaacaacctgctcaaaaagcat
cagctgctggaggcagacatatcggcccacgaggatcgtctgaaggacctgaacagccag
gctgacagcctgatgactagcagtgccttcgacacctcccaagtgaaagagaagcgggac
accatcaatggacgctttcagaagatcaagagcatggcaacctcccgaagagcaaaactg
agcgagtcccatcgcctgcaccagtttttccgagacatggatgacgaggagtcctggatc
aaggagaagaagttgttagtgagctctgaggactatggcagagacctcactggtgttcaa
aatctgaggaagaaacacaagcggctagaagccgaactggccgcacacgaaccagccatt
cagggtgtcctggacacggggaagaagctgtctgatgacaacaccatcgggcaggaggag
atccagcagcgtctcgcacagtttgtggagcactggaaggaactgaaacagctagcagct
gcacggggccagcggctggaggagtccttggagtatcagcagtttgtggccaacgtggag
gaggaggaggcttggatcaatgagaagatgaccctggtggccagcgaagactacggggac
actcttgctgccatccagggcttactgaagaaacatgaagcttttgagacagacttcact
gtccacaaggatcgagtgaatgatgtctgtactaatggacaagacctcattaagaagaac
aatcaccatgaggagaacatctcttcaaagatgaagggtctgaatggtaaagtgtctgac
ctggagaaagcagcagctcagaggaaagcgaagctggatgagaactcggccttccttcag
ttcaattggaaggctgacgtggtggagtcctggattggtgaaaaggagaacagcttgaaa
acagatgattatggccgagatctgtcttctgtccaaactctgctcaccaagcaggagaca
tttgatgctggcctgcaggccttccagcaggagggcattgccaatatcactgccctcaaa
gaccagctgctagctgccaagcacattcagtcgaaggccatcgaggcccgacatgcctcc
ctcatgaagaggtggacccagctgttggccaattcagctacccgcaagaagaagttgcta
gaggcccagagtcatttccgaaaggtagaagacctcttcctgacctttgccaaaaaggca
tcggctttcaacagctggtttgagaatgcagaagaggacctcacagacccagtgcgctgc
aactctctggaagaaatcaaagccctccgagaggctcatgatgccttccgctcatcgctc
agctctgcgcaggccgacttcaaccagctagccgagctggaccgtcagatcaagagtttc
cgagtggcctccaatccctacacctggttcaccatggaggccctggaagagacgtggagg
aacctacagaagatcattaaggagcgagaactggagctgcagaaggaacagcggcggcag
gaggagaatgacaagctacgccaagagtttgcccagcatgccaacgcgttccaccagtgg
atccaggaaacaagaacgtatctcctcgacgggtcctgcatggtcgaagagtcgggaact
ctggaatctcagcttgaagctaccaaacgcaagcaccaggagattcgggccatgagaagt
cagctgaagaagattgaggacctgggggctgccatggaggaagccctcatcctggacaac
aagtacactgagcacagcactgtgggcctggcccagcagtgggaccagttagaccagctg
ggcatgcgcatgcagcacaacctggagcagcagatccaggccaggaacacaacaggagtc
actgaggaggccctcaaggagttcagcatgatgttcaaacacttcgacaaggacaagtct
ggccggctgaatcatcaagagttcaaatcctgccttcgttctctgggttacgacctgcca
atggttgaggaaggagagcctgatcctgagtttgaggccatactggacactgttgatccc
aacagggacggccacgtctccctgcaagagtacatggctttcatgatcagccgtgaaacc
gagaatgtcaagtccagtgaagagatcgagagtgctttccgggccctcagctccgagggc
aagccttatgtgaccaaggaggagctctaccagaacctgacccgggaacaagctgactac
tgtgtctcccacatgaagccctatgtggatggcaagggccgcgaacttccaactgccttc
gactacgtggagttcacccgctctctctttgtgaattga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (17)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (15)   
DNA sequence (29)   
   RefSeq(nuc) (15)   
   GenBank (7)   
   EMBL (7)   
3D Structure (1)   
   PDB (1)   
Protein domain (14)   
   Pfam (14)   
All databases (72)   

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