KEGG R.norvegicus: 65027

Rattus norvegicus (rat): 65027

Entry

65027 CDS R.norvegicus

Gene name Chd8

Definition chromodomain helicase DNA binding protein 8

Orthology K04494 chromodomain helicase DNA binding protein 8

Pathway rno04310 Wnt signaling pathway

Class Environmental Information Processing; Signal Transduction; Wnt
signaling pathway [PATH:rno04310]

SSDB

Motif Pfam: SNF2_N BRK Chromo Helicase_C ResIII DEAD
PROSITE: ASP_RICH GLN_RICH HIS_RICH SER_RICH HELICASE_ATP_BIND_1
HELICASE_CTER CHROMO_2

Other DBs NCBI-GI: 197251949
NCBI-GeneID: 65027
RGD: 620696
RATMAP: ENSRNOG00000025011
Ensembl: ENSRNOG00000025011
UniProt: Q9JIX5

Position 15p14

AA seq 2581 aa
MADPIMDLFDDPNLFGLDSLTDDSFNQVTQDPIEEALGLPSSLDSLDQMNQDGGSGDVGN
SSASDLVPPPEETASTELPKESTAPAPESLTLHDYTTQPTSQEQPAQPVLQTSTPTSGLL
QVSKSQEILSQGNPFMGVSATAVSPSNTGGQPSQSAPKIVILKAPPNSSVTGAHVAQIQA
QGITSTAQPLVAGTANGGKVTFTKVLTGTPLRPGVSIVSGNTVLATKVPGNQAAVQRIVQ
PSRPVKQLVLQPVKGSAPAGNPGATGPPLKPAVTLTSTPAQGESKRITLVLQQPQSGGPQ
GHRHVVLGSLPGKIVLQGNQLAALTQAKSAQGQPAKVVTIQLQVQQPQQKIQIVPQPPSS
QPQPQPPPSAQPLTLSSVQQAQIMGPGQNPGQRLSVPLKMVLQPQAGSSQGASSGLSVVK
VLSASEVAALSSPASCAPHTAGKTGMEENRRLEHQKKQEKANRIVAEAIARARARGEQNI
PRVLNEDELPSVRPEEEGEKKRRKKSSGERLKEEKPKKSKTAAASKTKGKSKLNTITPVV
GKKRKRNTSSDNSDVEVMPAQSPREDEESSIQKRRSNRQVKRKKYTEDLDIKITDDEEEE
EVDVTGPIKPEPILPEPVPEPDGETLPSMQFFVENPSEEDAAIVDKVLSMRVVKKELPSG
QYTEAEEFFVKYKNYSYLHCEWATISQLEKDKRIHQKLKRFKTKMAQMRHFFHEDEEPFN
PDYVEVDRILDESHSVDKDNGEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQS
RHPELKRVNRPQANAWKKLELSHEYKNRNQLREYQLEGVNWLLFNWYNRQNCILADEMGL
GKTIQSIAFLQEVYNVGIHGPFLVIAPLSTITNWEREFNTWTEMNTIVYHGSLASRQMIQ
QYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIIDEAHRLKNRNCKL
LDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDLKTEEQVQK
LQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRAILEKNFSFLSKGAGHTN
MPNLLNTMMELRKCCNHPYLINGAEEKILMEFREACHIIPQDFHLQAMVRSAGKLVLIDK
LLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAIDRFSKPDS
DRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRLITR
NSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYAAIMEEDD
EGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWAKK
ADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESEDDERPRSRRHDRHHT
YGRTDCFRVEKHLLVYGWGRWRDILSHGRFKRRMTERDVETICRAILVYCLLHYRGDENI
KSFIWDLISPAENGKTKELQNHSGLSIPVPRGRKGKKVKSQSTFDIHKADWIRKYNPDTL
FQDESYKKHLKHQCNKVLLRVRMLYYLRQEVIGDQAEKVLGGAIASEIDIWFPVVDQLEV
PTTWWDSEADKSLLIGVFKHGYEKYNTMRADPALCFLEKAGRPDDKAIAAEHRVLDNFSD
LVEGIDFDKDCEDPEYKPLQGPPKDPDDEGDPLMMMDEEISVIDGDEAPVTQQPGHLFWP
PGSALTARLRRLVTAYQRSYKREQMKIEAAERGDRRRRRCEAAFKLKEIARREKQQRWTR
REQTDFYRVVSTFGVEYDPDNMQFHWDRFRTFARLDKKTDESLTKYFHGFVAMCRQVCRL
PPAAGDEPPDPNLFIEPITEERASRTLYRIELLRRLREQVLCHPLLEDRLALCQPPGLEL
PKWWEPVRHDGELLRGAARHGVSQTDCNIMQDPDFSFLAARMNYMQNHQAGASAASLSRC
STPLLHQQCTSRTASPSPLRPDVPAEKSPEENAVQVPSLDSLTLKLEDEVVARSRLTPQD
YEIRVASSDTAPLSRSVPPVKLEDDDDSDSELDLSKLSPSSSSSSSSSSSSSSSDESEDE
KEEKLTADRSRPKLYDEESLLSLTMSQDGFPNEDGEQMTPELLLLQERQRASEWPKDRVL
INRIDLVCQAVLSGKWPSNRRSQEMTTGGILGPGNHLLDSPSLTPGEYGDSPVPTPRSSS
AASMVEEEASAVTTAAAQFTKLRRGMDEKEFTVQIKDEEGLKLTFQKHRLMANGVMGDGH
PLFHKKKGNRKKLVELEVECMEEPNHLDVDLETRIPVINKVDGTLLVGDEAPRRAELDMW
LQGHPEFAVDPRFLAYMEERRKQKWQRCKKNNKTELNCLGMEPVQPANSRNGKKGHYAET
AFNRVLPGPIAPENSKKRVRRTRPDLSKMMALMQGGSTGSLSLHNTFQHSSSNLQSVSSL
GHSSATSASLPFMPFVMGGAAAPPHVDSSTMLHHHHHHPHPHHHHHHHPGLRTTGYPSSP
ATTTSGTALRLPTLQHEDDDEEEDEDDDDLSQGYDSSERDFSLIDDPMMPANSDSSDDAD
D

NT seq 7746 nt +upstreamnt +downstreamnt
atggcagaccccatcatggatctgtttgatgacccaaacttatttggcctggattctttg
actgatgacagctttaatcaggtcactcaagaccccattgaagaagcacttggactgcca
agttctctggactccttggatcagatgaaccaagatggtggaagtggtgatgtggggaat
tcatcagcaagtgacctggttcccccaccagaggaaacagcttccactgaacttcccaaa
gaatccacagctccagctccagaatccttaaccttgcatgattataccactcagcccacc
agccaggagcagccagcccaacctgtcttgcagacatcaacaccaacatcaggacttttg
caggtctctaagagccaggagatcctgagccaagggaatcctttcatgggtgtctctgcc
acagctgtctcccccagtaatactggaggacagccatctcagtcagctcctaagattgtt
attcttaaagctccaccaaactcctcagtcacaggtgcccatgtggcacaaattcaggcc
caaggtatcaccagtacagctcagcccctagtggctggcacagccaatggtggaaaagtc
acttttaccaaagtgcttactggtacacccctccgaccaggtgtatccattgtctctggt
aatacagtgctggccacgaaggtccctgggaaccaggctgctgttcagcgcattgtccag
ccaagccgaccagtaaagcagctagttctccagccagttaagggttccgctcctgctgga
aatcccggggctaccgggccccccctgaagcctgcagttacactgacatctacacctgcc
cagggtgaatcgaaacgcatcactttggtccttcagcagccacagtccggaggtccccaa
ggacatcggcatgttgtgttagggagtctacccggcaagatagtgttacagggcaaccaa
ctggcagccttgactcaagccaagagtgctcaggggcagcctgccaaagtagtcaccatc
caactgcaggtgcagcagccacagcaaaagatccagattgtaccacagcccccatcatca
cagccacagccacagccgccaccctcagcccaaccattgaccctgtcctctgtacagcag
gctcagataatgggaccaggccaaaacccaggacagagactttctgtaccgctcaagatg
gtgctgcagccacaggctggctcttctcagggagcctcttctggactctctgtggttaaa
gttctaagtgccagtgaagtggcagccctgtcatcaccagcaagctgtgcccctcacact
gcagggaagactggaatggaggagaaccgcaggcttgagcaccagaaaaagcaagaaaaa
gcaaatcggattgtggcagaggccattgctagggcccgggccaggggtgagcaaaacata
cctcgagtcctgaatgaggatgagctgcctagtgtccggccagaagaggagggtgaaaag
aaacgcaggaagaagagcagtggagaaaggctgaaggaagagaagccaaagaaaagcaag
actgctgctgcctccaaaacaaagggcaagagtaagctaaacaccatcactcctgtagtg
ggcaaaaagagaaagcgtaacacatcgtctgacaactctgatgtggaggtcatgcctgca
cagtcgccccgggaggacgaagagagcagcatccagaagagacgttcaaaccgccaagtt
aagcgaaaaaaatatacagaggacctggatataaagataacagatgatgaagaggaggag
gaggtcgatgttactggtccaataaaacccgagcccatcctcccagaaccagtgccagag
cctgatggggagactctgccttccatgcagttctttgtggagaatcccagtgaagaagac
gcagctattgtggacaaagtgctttccatgcgagttgtgaagaaagagcttccttctgga
cagtacactgaggctgaggaattctttgtcaagtacaagaactactcctatctgcactgt
gaatgggcaactatctcccagctggagaaggacaagaggatccatcagaagctaaagcgc
ttcaagacgaaaatggctcagatgaggcacttctttcatgaagatgaagagcctttcaat
ccagactacgtcgaggtggacaggatactggacgagtctcacagtgtggacaaggataat
ggtgagcctgtaatctactacctggtaaaatggtgctctctgccctatgaggacagtacg
tgggagctaaaagaggatgttgacgagggcaagattcgggaatttaaacggatccagtca
aggcatccagaactcaaaagggtgaatcgtccacaggcaaatgcctggaagaaattggag
ttgtcacatgaatataaaaacagaaaccaattacgggagtatcagttagaaggggtcaac
tggcttctctttaattggtataacaggcagaactgcatcctggctgatgaaatgggatta
ggcaaaaccattcagtccattgccttcttgcaggaggtatataatgtgggcatccatggt
ccctttttggtcattgctccattgtccaccattactaactgggagcgagaatttaatacc
tggacagagatgaacactattgtgtaccatggcagcctggccagccggcagatgattcag
caatatgaaatgtactgtaaagattcacggggtcgcctcatcccaggtgcatataagttt
gatgccttgatcaccacttttgagatgattttgtcagactgtcctgaacttcgtgaaatt
gaatggcgttgtgttatcattgatgaagcccatcggctaaagaaccgtaattgtaagcta
ctcgatagcctcaagcacatggacctggagcataaagtgttacttacaggaacaccattg
caaaatactgtagaggagctgttcagcctacttcatttcttggaaccttctcagtttccc
tcagaatcagaattccttaaggattttggggatctgaagacagaggagcaggttcaaaag
cttcaggccattctaaagccaatgatgctgagaagactcaaagaggatgttgaaaagaat
ttggctcccaaacaggagactattattgaagtagagctgaccaacatccagaagaaatac
tacagagctattttagagaagaatttctccttcctttccaaaggagcagggcataccaat
atgcctaacctcctgaacacgatgatggagttacgcaagtgctgcaaccacccatacctc
atcaatggtgcagaagagaaaatcctgatggaatttcgggaagcttgccatattatacct
caagatttccatctgcaggccatggttcggtcagctggcaaattagttcttattgacaag
ttacttccaaagcttaaagctggtggccataaagttctgatcttctcccagatggtacgc
tgtctagatattctggaggattatctgatccagaggaggtacttatacgaacgcattgat
gggcgagttagaggcaaccttcgacaagctgctatcgaccgctttagcaagcctgactca
gaccgctttgtcttcttgctatgtacccgtgctggtggacttggtattaatcttacagct
gctgatacctgtattatttttgattcagactggaatccacagaatgacctgcaggcccaa
gcacgttgtcatcgcattggacagagcaaagctgtaaaggtgtaccgactcatcactcgc
aattcctacgagagagagatgtttgataaagctagcctcaagttggggctggacaaagct
gtgcttcagtccatgagtggtcgggatggcaacattactggaattcaacagttctccaag
aaagagattgaagatctcttaaggaaaggtgcatatgcagccataatggaggaagacgat
gagggttctaagttttgtgaagaggacatagatcagatcttgctgagacggactacaacc
atcactattgagtctgaagggaaagggtctacttttgccaaggcaagctttgttgcttct
gaaaataggacagatatttccctggatgatccaaacttttggcaaaaatgggccaaaaag
gcagacctagacatggatctgctgaatagtaagaataacttagtgattgatacaccacga
gttcggaaacagactcgacacttcagcactctaaaagatgacgacctggttgagttttct
gatttagaaagtgaagatgatgaacgtccccgttcccgaagacatgaccgtcatcacacc
tatgggcgcactgactgctttcgggtagaaaaacatctcctggtatatggttggggacgt
tggagagatattctgtctcatggacgatttaagcggcgcatgactgaaagagatgtggag
acaatatgccgagccatccttgtgtactgtcttctacactaccgtggggatgaaaacatc
aaaagcttcatttgggacttgattagccctgctgaaaatggcaagacaaaagaattgcag
aatcattcaggtctgtctatccctgtgccccgtgggcgtaaggggaaaaaagtgaagtca
caaagtacttttgacattcataaggcagactggatccggaaatataaccctgatactctg
ttccaagacgagagctataagaagcacttgaaacatcagtgtaacaaggtactgttgaga
gtacggatgctgtactacctgagacaggaggtcattggagaccaagcagagaaggtgtta
gggggcgccatagccagtgagattgacatatggttcccagtagtggatcagctggaggtt
ccaacaacatggtgggatagtgaggctgacaaatccctgctcattggcgtttttaagcat
ggctatgaaaaatacaataccatgagggcagaccctgccttgtgtttcctggaaaaagct
ggcaggccagatgacaaagccattgcagcggagcacagagttctggataacttctccgac
ctggtagaagggattgactttgataaggattgtgaagatcctgaatataaaccccttcag
ggtcccccaaaggacccggatgatgagggtgatcccttgatgatgatggatgaggagatc
tcagtcattgacggagatgaagccccggtgactcaacagccagggcatttattctggcct
ccaggctctgccctcacagctaggctccgccgcctggtaaccgcctatcaacgcagctac
aagagagaacaaatgaagatagaggctgcggagcgtggggaccggagacgccgacgttgt
gaagcggcctttaagctcaaagaaattgcaaggcgggaaaaacaacaacgatggacacgg
cgcgagcaaactgatttctatcgagtagtgtctacctttggggtagagtacgaccctgac
aacatgcagtttcactgggatcgcttccgtacttttgctcgcctggacaaaaaaacagat
gaaagccttaccaagtacttccatggttttgtggccatgtgtagacaagtgtgccgcctt
cccccagctgctggtgatgaacctccagatcctaatctgtttattgagcccatcactgaa
gagagagcatcacggactctctaccgaatcgagttgcttcgacgcttacgggaacaagtt
ttatgccacccccttttagaagatcggctggcattgtgtcagcctccaggtcttgaattg
cccaaatggtgggaacctgtccgtcacgatggggagctcctccgaggagcagcccgccat
ggggtgagccaaacagactgcaacatcatgcaggacccagacttctcttttctggctgcc
cgtatgaattatatgcagaaccatcaggcaggagcatcagctgcatccctgtcacgatgc
tccactccactgctgcaccagcagtgtacctcacgcactgcttcaccatcacccctgcgc
ccagatgttcctgctgaaaagtcacctgaggagaatgctgttcaggtccccagtctggac
agtctgactttaaaactagaggatgaggtggtggctaggagccgactcaccccacaagac
tatgaaattcgtgtagcctcttcagatacagcccctctgtcccggagtgttccgccagtc
aaactggaggatgacgatgattcagactctgagctggacttgagcaagttgtcaccatcg
tcctcttcatcttcatcctcctccagctccagctccagcagtgatgagagtgaagatgag
aaggaagagaagttaactgctgaccggtcccgcccaaagctctatgatgaagagagcctt
ctgtcccttactatgtcccaagatggattcccaaatgaagatggagaacaaatgacccct
gagttgctgctgctgcaggaaagacaaagagcctctgaatggcccaaggatcgtgttctg
ataaaccgcattgacctcgtctgccaggctgtactctcagggaaatggccttctaaccgc
cggagccaggaaatgacaacaggaggaattttggggccaggaaaccatttattagacagt
ccctctttgaccccaggagaatatggggactctccggtccccacaccacgaagcagcagt
gcagcttccatggtagaggaagaagcatctgcggtcaccacagcagcagcccaatttact
aaacttcggcgaggcatggacgagaaagagtttacagttcagatcaaagatgaagaagga
ttgaagttaacattccagaagcatagattgatggctaatggtgtaatgggagatggacat
ccactgtttcataagaagaaggggaacaggaaaaagctagtagagctggaggtggagtgc
atggaagagcctaatcaccttgatgtggacctggagacccggatccctgtcatcaataag
gtggatggtactttgctggtgggtgatgaggcccctcgccgggcggagctggacatgtgg
ttacagggtcatccagagtttgctgttgatccccgatttctagcgtatatggaggaacgt
agaaaacagaagtggcagagatgtaaaaaaaataataagacagaattgaactgtttggga
atggaaccagtccagccagccaactctagaaatgggaaaaagggtcactatgctgaaact
gcgttcaaccgggttttgccagggcctattgcaccagaaaacagcaagaaacgggtccgc
aggacaagaccagacctttctaagatgatggccctgatgcagggtggaagcactgggtcc
ctatctctgcataacacctttcaacacagcagtagtaacctacagtctgtgtcgtctctg
ggtcacagcagtgccacttctgcatctctgcctttcatgccgtttgtgatgggtggtgca
gcagcaccccctcatgtagactccagcaccatgcttcatcatcaccaccaccacccccac
ccccaccatcaccaccatcaccatccaggcttgagaaccactggctacccttcttcacca
gctactaccacctctggtactgccttgcggttaccaacactgcagcatgaggacgatgat
gaagaggaggatgaagatgatgatgatttatctcagggctatgatagctcagaaagggac
ttctcactcattgatgaccctatgatgccagccaactcagactccagtgatgatgctgac
gactga

All links

Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (3)   
   UNIGENE (1)   
   ENSEMBL-RNO (1)   
   RATMAP-RNO (1)   
   RGD-RNO (1)   
Protein sequence (6)   
   UniProt (1)   
   RefSeq(pep) (3)   
   IPI (2)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (13)   
   Pfam (6)   
   PROSITE (7)   
All databases (33)

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