KEGG T01003: 681309

Rattus norvegicus (rat): 681309

Entry

681309 CDS T01003

Definition

similar to Thrombospondin-3 precursor

Orthology

K04659

thrombospondin 2/3/4/5

Organism

rno Rattus norvegicus (rat)

Pathway

rno04145	Phagosome
rno04151	PI3K-Akt signaling pathway
rno04510	Focal adhesion
rno04512	ECM-receptor interaction
rno05144	Malaria

Class

Environmental Information Processing; Signal transduction; PI3K-Akt signaling pathway [PATH:rno04151]
Environmental Information Processing; Signaling molecules and interaction; ECM-receptor interaction [PATH:rno04512]
Cellular Processes; Transport and catabolism; Phagosome [PATH:rno04145]
Cellular Processes; Cell communication; Focal adhesion [PATH:rno04510]
Human Diseases; Infectious diseases; Malaria [PATH:rno05144]

SSDB

Motif

Pfam:

TSP_C TSP_3 COMP EGF_CA EGF_3 cEGF EGF

Other DBs

NCBI-GI:

NCBI-GeneID:

RGD:

Ensembl:

Position

2q34

AA seq 955 aa
MEKPELWVALALLLCSYTCGSQDLQVIDLLTVSESRQMAAVAEKVRTALLTAGDIYLLST
FRLPPKQGGVLFGLYSRQDNTRWLEASVVGKINKVLVRYQREDGKVHAVNLQQAGLADGR
THTALLRLRGPSRPSPGLQLYVDCKLGDQHAGLPALAPIPPAEVSGLEIRTGQKAYLRMQ
GFVESMKIILGGSMARVGALSECPFQGDESIHNAVTSALQSILGEQTKALVTQLTLFNQI
LVELRDDIRDQVKEMSLIRNTIMECQVCGFHEQRSHCSPSPCFRGVDCMEVYEYPGLRCG
PCPPGLRGNGTHCEDIDECAHADPCFLGSSCINTMPGFHCEACPQGYKGTRVSGVGIDYA
RASKQVCSDIDECNDGNNGGCDPNSICTNTVGSFKCGPCRLGFLGNQSQGCTPARTCHSP
AHSPCHIHAHCLFERNGAVSCQCNVGWAGNGNVCGPDTDIDGYPDQALPCMDNNKHCKQD
NCLLTPNSGQEDADNDGVGDQCDDDADGDGIKNVEDNCRLFPNKDQQNSDTDSFGDACDN
CPNVPNNDQKDTDGNGEGDACDNDVDGDGIPNGLDNCPKVPNPLQTDRDEDGVGDTCDSC
PEMSNPTQTDADSDLVGDVCDTNEDSDGDGHQDTKDNCPQLPNSSQLDSDNDGLGDECDS
DDDNDGVPDYVPPGPDNCRLVPNPNQKDSDGNGVGDVCEDDFDNDAVVDPLDVCPESAEV
TLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGTF
HVNTVTDDDYAGFLFSYQDSGRFYVVMWKQTEQTYWQATPFRAVAQPGLQLKAVTSISGP
GEHLRNALWHTGHTPDQVRLLWTDPRNVGWRDKTSYRWRLLHRPQVGYIRVKLYEGPQLV
ADSGVIIDTSMRGGRLGVFCFSQENIIWSNLQYRCNDTVPEDFEPFRRQLLQGRV

NT seq 2868 nt +upstreamnt +downstreamnt
atggagaagccggaactttgggttgccctggctctcctcctttgctcttacacatgtggc
agtcaggaccttcaggtaattgacctgctgacggtgagtgagtccaggcagatggcagct
gtagcagagaaggtccggacagctttactcactgctggggacatctacctcttgtccact
ttccgcctccctccaaagcaaggtggtgtcctctttggcctctactctcgccaagacaac
acacgatggctggaggcctctgttgttggcaagatcaacaaagtgctggtgcggtaccag
cgggaagatggcaaagtgcacgcagtgaaccttcagcaagcaggcttggctgacgggcgc
acgcacaccgctctcctgcgactccgaggaccttctcgacccagccctggcctgcaactg
tatgtggactgtaaactgggtgaccaacacgctggcctcccagccctagcgcccattcct
ccagcggaggtcagcggactggagattagaacaggacaaaaggcttacctgaggatgcag
ggctttgtggaatcgatgaagattattttgggtggatcgatggctcgggtgggagccctg
agcgaatgtccgttccaaggagatgaatccattcacaatgcagtgaccagcgcgctgcag
tccattctaggagagcagaccaaggcactggtcactcagctcacactcttcaaccagatc
ctagtggagctccgggatgacatccgggaccaggtgaaggaaatgtccctcatccggaac
accatcatggagtgtcaggtgtgcggtttccacgagcagcgttcacactgcagccccagc
ccctgcttcagaggtgtggactgcatggaagtgtatgagtacccagggctacgctgtggg
ccctgcccacctggcctgcgcggcaatggcacccactgtgaagacatcgacgaatgtgct
cacgctgacccctgtttcctggggtccagctgcatcaacaccatgcctggcttccactgc
gaggcctgtcctcaagggtacaagggcacccgagtgtctggagtgggcattgactatgct
agagccagcaaacaggtctgcagtgacattgacgaatgtaacgacggtaacaatggaggc
tgtgacccaaattccatctgcaccaacactgtggggtctttcaaatgtggtccctgccgc
ctgggtttcctggggaaccagagccagggctgcactccagccaggacgtgccacagcccc
gcccacagcccctgccacatccacgctcattgtctttttgaacgcaacggtgcagtgtca
tgccagtgtaacgtgggctgggcagggaacgggaacgtgtgtggacctgacacggacata
gacggctatccagaccaggcgcttccctgcatggacaacaacaaacactgcaagcaggac
aattgccttttgacacccaactctgggcaagaagatgctgataatgatggtgtcggggac
cagtgtgatgacgacgctgatggggatggtatcaagaatgttgaggacaactgccgactg
ttccccaacaaggaccagcagaattcagacacagattcatttggtgacgcctgtgacaac
tgtcccaatgttcccaacaatgaccagaaggacacggatggcaatggagaaggagacgcc
tgtgacaacgatgtggacggggacggcatccccaatggcttggacaattgccctaaagta
cccaacccactgcagacagaccgggatgaagatggagtcggagacacttgcgacagctgc
cctgagatgagcaatcctacccagacagatgcagacagtgacctggtaggggatgtctgt
gacaccaacgaagacagcgatggagacgggcaccaggacaccaaggacaactgtcctcag
ctgcccaacagctctcagctggactcggacaacgacgggcttggagatgagtgtgacagc
gacgatgacaatgacggggtgcccgattacgtgcctcccgggcctgataactgtcgcctg
gtacccaatcctaaccagaaggactcagacggcaacggtgttggtgatgtctgtgaggat
gactttgacaatgatgcagtggttgaccctctggatgtgtgcccagaaagtgcagaagtt
accctcacggacttccgggcctatcagaccgtgattctggatccggagggtgacgctcag
atcgatccaaactgggtagtgctcaaccagggcatggaaattgttcagactatgaacagt
gacccaggtcttgcagttggatacacagccttcaatggtgtagactttgaaggcactttc
cacgtgaacacagtcactgatgatgactatgcaggcttcctcttcagttaccaggacagt
ggccgcttctatgtggtcatgtggaaacagacggagcagacctactggcaggccacgcct
ttccgagcagtggcccaaccagggctgcagctcaaggcagtgacatcaatatctggccca
ggtgagcacctccggaatgctctgtggcacactggccacacccctgatcaggtacgactg
ctgtggactgatccacggaatgtgggttggcgagacaagacatcctatagatggcggctg
ctccaccggccccaagtcggctacattcgggtgaagctctatgagggtccccagctagtg
gcggactctggggtgattattgatacgtccatgcgaggggggcgtcttggtgtattctgc
ttctcccaagaaaacatcatttggtctaatctccagtaccgatgcaatgacacagtgcct
gaggactttgagccattcaggaggcaactgctccagggaagggtgtga

All links

Pathway (5)   
   KEGG PATHWAY (5)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   ENSEMBL-RNO (1)   
   OC (1)   
   RGD (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (7)   
   Pfam (7)   
All databases (23)   

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