KEGG   Rattus norvegicus (rat): 84581Help
Entry
84581             CDS       T01003                                 

Gene name
Hdac6
Definition
histone deacetylase 6
Orthology
K11407  
histone deacetylase 6/10 [EC:3.5.1.98]
Organism
rno  Rattus norvegicus (rat)
Pathway
Alcoholism
Viral carcinogenesis
Class
Human Diseases; Cancers; Viral carcinogenesis [PATH:rno05203]
Human Diseases; Substance dependence; Alcoholism [PATH:rno05034]
BRITE hierarchy
SSDB OrthologParalogGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
RGD: 
Ensembl: 
Position
Xq13
AA seq 1152 aa AA seqDB search
MTSTGQDSSTRQRKSRHNPQSPLQDSSATLKRGGKKGAVPHSSPNLAEVKKKGKMKKLSQ
PAEEDLIVGLQGLDLNSETRVPVGTGLVFDEQLNDFHCLWDDSFPENPERLHAIKEQLIL
EGLLGRCVSFQARFAEKEELMLVHSLEYIDLMETTQYMNEGELRVLAGTYDSVYLHPNSY
SCACLATGSVLRLVDAVMGAEIRNGMAVIRPPGHHAQRSLMDGYCMFNHLAVAARYAQKK
HRIQRILIVDWDVHHGQGTQFIFDQDPSVLYFSIHRYEHGRFWPHLKASNWSTTGFGQGQ
GYTINVPWNQVGMRDADYIAAFLHILLPVAFEFQPQLVLVAAGFDALHGDPKGEMSATPA
GFAHLTHFLMGLAGGKLILSLEGGYNLHALAKGVSGSLHTLLGDPCPMLESPVAPCASAQ
TSISCTLEALEPFWEVLERSVEPQDEDEVEGDMLEDEEEEGHWEATALPMDTWPLLQNRT
GLVYDERMMSHCNLWDNHHPETPQRILRIMCHLEEVGLAARCLILPARPALDSELLTCHS
AEYVERLRATEKMKTRDLHREGANFESIYICPSTFACAQLATGAACRLVEAVLSGEVLNG
IAIVRPPGHHAEPDAACGFCFFNSVAVAARHAQVIAGRALRILIVDWDVHHGNGTQHIFE
EDPSVLYVSLHRYDRGTFFPMGDEGASSQVGRAAGTGFTVNVPWNGPRMGDADYLATWHR
LVLPIAYEFNPELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGRIILILEGG
YNLTSISESMAACTHSLLGDPPPQLTSLRPPQSGALASISEVIQVHRKYWRSLRLMKMED
KEERSSSRLVIKKLPQSASPVSAKGMTTPKGKVLEAGMRKPTAALPTKESTLGQAKAKTA
KALLAQGQSSEQAAKGTTLDLATSKDTVGGATTDQCASVAATENSANQTTSGEEASGETE
SFGTSPSSNASKQTTGASPLHGAAAQQSPELGLSSTLELSSEAQEVQESEEGLLGEAAGG
QDMNSLMLTQGFGDFNTQDVFYAVTPLSWCPHLMAVCPIPAAGLDVSQPCKTCGSVQENW
VCLTCYQVYCSRYVNAHMVCHHEASEHPLVLSCVDLSTWCYLCQAYVHHEDLQDVKNAAH
QNKFGEGMPHLQ
NT seq 3459 nt NT seq  +upstreamnt  +downstreamnt
atgacctccaccggccaagattcttctaccaggcagcgaaagagtaggcacaatccccaa
tcgccccttcaggactccagcgccaccttgaagcgtggtgggaagaagggtgctgtaccc
cactccagccccaatctagcggaggtaaagaagaaaggcaaaatgaagaagctcagccaa
ccagctgaagaagacctaatcgttgggcttcaagggctggatctgaactctgagacaaga
gtaccagttggtactggattggtatttgatgaacagctaaatgacttccactgcctttgg
gatgacagcttccctgaaaaccctgagcggctccatgccatcaaagagcagctgatcctg
gagggcctcctgggccgctgtgtgtcctttcaggcccggttcgccgagaaggaggaactg
atgttggttcacagcctggaatacattgatctgatggagacaacccagtacatgaatgaa
ggagaacttcgagttcttgcaggcacctatgattccgtttatctgcatccgaactcatat
tcatgtgcctgcctagctacaggctctgtcctcaggctggtagatgcagttatgggggct
gagattcggaatggcatggccgtcatcaggcctcctggacaccatgctcagcgcagtctt
atggatgggtattgcatgttcaaccacctggctgtggctgcccgctatgcacaaaagaag
caccgcattcagaggattctcatcgtggactgggatgtgcaccatggtcaaggaacacag
ttcatcttcgaccaggaccccagtgtactctatttctccatccaccgctatgagcatggt
cggttctggccccaccttaaggcttctaactggtccactacaggctttggccaaggccaa
ggatataccatcaatgtaccttggaaccaagtggggatgcgggatgccgactacattgct
gctttcctgcacatcctgctgccagttgcctttgagtttcagcctcaactggtcctggtg
gccgctggatttgatgccctccatggagaccccaagggagagatgtctgccactccagca
ggatttgcccacctgacccatttccttatgggtttggcaggaggcaagttgattctgtct
ctggagggtggctataacctccatgccttggctaagggcgtcagtggctcactccacacc
cttcttggagatccttgccccatgttggagtcccctgttgcaccttgtgcaagcgcccag
acttctatctcctgcactctagaagcccttgaacccttctgggaagtccttgagagatca
gttgagccccaggatgaagatgaagtggaaggagacatgctagaggatgaagaggaggaa
ggccactgggaggccactgctctaccaatggatacatggccactgctccagaaccgcact
gggctggtctatgacgaaagaatgatgagtcactgcaacctgtgggacaatcatcatcct
gagacacctcagcgcatcctacgcatcatgtgtcacctggaggaggtgggccttgcagca
cgctgtctcatcctacctgctcggcctgccctggattctgaactccttacgtgccacagt
gcggagtatgtggaacgtcttcgggccacagaaaagatgaaaactcgggatctgcaccgt
gaaggtgccaactttgagtccatctacatctgccccagcacctttgcctgcgcacagctt
gccacaggcgctgcctgccgcctggtggaagccgtgctttcaggagaggttttgaatggc
attgcaatagtgcgccctccaggacaccatgcggagccagatgctgcttgtggtttctgc
tttttcaattctgtagctgtagctgctcgccatgcccaagtcattgctggacgtgccctg
aggatcctaatcgtggattgggatgttcaccatgggaatggaactcagcacatatttgag
gaagaccccagtgtattatacgtgtccctgcaccggtatgaccgtggtactttcttcccc
atgggggatgagggtgccagtagccaagtagggcgagctgcaggtacaggcttcactgtc
aatgtgccctggaatgggccccgcatgggggatgctgattacctggctacgtggcatcgg
ctggtacttcccatcgcctatgagtttaacccagagctggtgctgatatcagctggcttt
gatgctgcccaaggggacccactgggaggctgccaagtgacacctgagggttatgcccac
ctcacccacctgctgatgggccttgctggtggccgtattattcttattctggagggtggc
tacaacttgacatccatctctgaatctatggctgcctgcacccattccctccttggagac
ccaccaccccagcttacttcgctccgacctccccagtcaggagccctggcttcaatcagt
gaggtcatccaagtgcatcgcaaatactggcgcagtttgcggttaatgaagatggaagac
aaggaagaacgctctagttctaggcttgtcatcaagaagctgccccagtcagctagtcct
gtgtccgctaagggaatgaccacaccaaaaggaaaggttctcgaagcaggcatgaggaag
cccacagcggcattacctacaaaagagtcgactctaggccaggctaaagcaaagacagct
aaggcattgctcgcccagggccagtcctcagaacaagctgctaagggaactacactggat
ctggccacctcaaaggacactgtgggaggtgccacaactgaccagtgtgcttcagtagca
gctacagaaaactcagctaaccagaccacgtcaggggaggaggcttcaggagaaactgag
tcattcggaacttctccatcctcaaatgccagcaagcagaccacaggagcttcacctctg
cacggagccgcagcccagcagtcccccgagcttgggctttccagcactttggagctaagc
agtgaagctcaggaagtccaagaatccgaggagggcctactaggagaagcagctggaggt
caggacatgaacagcttgatgctgacacaaggatttggggactttaatacccaggatgta
ttttatgccgtgactccactatcctggtgtccccacttgatggcggtgtgccccattcct
gcagcaggcctagatgtgtcccaaccttgtaagacctgtggatcggttcaggagaactgg
gtgtgtctgacttgttatcaggtgtactgcagtcgctatgtcaatgcccatatggtctgc
caccatgaagcctctgaacaccctctggtcctcagctgtgttgacctgtctacctggtgt
tacctctgtcaggcctatgtccaccacgaggatctccaagatgtgaagaacgctgcccac
cagaacaagtttggggagggcatgccgcacttgcagtaa

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