KEGG   Rattus norvegicus (rat): 94196
Entry
94196             CDS       T01003                                 
Symbol
Rnf138
Name
(RefSeq) E3 ubiquitin-protein ligase RNF138
  KO
K10668  E3 ubiquitin-protein ligase RNF138 [EC:2.3.2.27]
Organism
rno  Rattus norvegicus (rat)
Brite
KEGG Orthology (KO) [BR:rno00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rno04121]
    94196 (Rnf138)
Enzymes [BR:rno01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     94196 (Rnf138)
Ubiquitin system [BR:rno04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    94196 (Rnf138)
SSDB
Motif
Pfam: zf-C3HC4_2 zf_C2HC_14 zf-C3HC4 zf-RING_UBOX zf-RING_2 zf-RING_5 zf-C3HC4_3 zf-Nse zf-Di19 zf-C3HC4_4 RlmA_N zf-RING_6 zf-rbx1 zf-RING_4 zf-MIZ zf-RING_10 Prok-RING_4 Sina_RING U-box RB_B
Other DBs
NCBI-GeneID: 94196
NCBI-ProteinID: NP_446040
RGD: 621485
Ensembl: ENSRNOG00000015645
UniProt: Q99PD2 A6J2H0
Position
18:12558430..12590849
AA seq 209 aa
MSEELSADTSYTEDDFYCPVCQEVLKTPVRTAACQHVFCRKCFLTAMRESGIHCPLCRGS
VTRRERACPERAIDLENIMRRVSGSCRCCSKKIKFYRMRHHYKSCKKYQDEYGVSSVIPN
VKISQDSVRSSNRSETSASDNTETYQEDTSSSGHPTFKCPLCQESNFTRQRLLDHCNSNH
LFQIVPVNLQLDEETQYQTAVEESFQVNM
NT seq 630 nt   +upstreamnt  +downstreamnt
atgtccgaggagctttcggcggacacgtcctacacggaagatgatttctactgcccagtc
tgtcaggaggtgctcaagacgccggtgcggaccgcggcctgtcagcacgttttctgtaga
aaatgtttcctgactgcaatgagagagagtggaatacattgtcccctatgtcgcggaagt
gtgactagaagagaaagagcatgtccggaacgggccatagatcttgaaaatatcatgagg
agggtttctggtagctgcagatgctgttcaaaaaagattaaattttatcgcatgagacat
cattacaaatcttgtaagaagtatcaggatgaatatggtgtctcttctgtcattccaaat
gttaagatttctcaagattcagtaaggagcagtaataggagtgaaacatctgcatctgat
aacacagaaacttatcaagaggatacaagttcttctgggcatcccacctttaagtgtccc
ttatgtcaagagtcaaatttcaccagacaacgtttattggatcactgtaatagtaaccac
ctgtttcagatagttcctgtgaatcttcagctagatgaggaaacccaatatcaaactgct
gtggaagagtctttccaagttaacatgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (6)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   RGD (1)   
Protein sequence (6)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (9)   
   RefSeq(nuc) (3)   
   GenBank (3)   
   EMBL (3)   
Protein domain (20)   
   Pfam (20)   
All databases (46)   

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