KEGG   Rhodococcus opacus PD630: Pd630_LPD03182
Entry
Pd630_LPD03182    CDS       T03071                                 
Name
(GenBank) Uracil-DNA glycosylase
  KO
K03648  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:roa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Pd630_LPD03182
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:roa03400]
    Pd630_LPD03182
Enzymes [BR:roa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     Pd630_LPD03182
DNA repair and recombination proteins [BR:roa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Pd630_LPD03182
 Prokaryotic type
     Pd630_LPD03182
SSDB
Motif
Pfam: UDG
Other DBs
NCBI-ProteinID: AHK30401
Position
3378617..3379291
AA seq 224 aa
MAAPLSDLVEAGWADALEPVSGRITEMGEFLRAEIADGREYLPAGENVLRAFTHPFSEVK
VLIVGQDPYPTPGHAVGLSFSVAPDVRPVPRSLGNIFTEYSKDLGYETPTTGDLTPWSRQ
GVLLLNRVLTVQPGLPASHRKKGWEAVTEQAIRALVARPEPLVAILWGRDASTLKPMLGD
VPTIESAHPSPLSASRGFFGSRPFSRANELLDGLGAEPVNWQLP
NT seq 675 nt   +upstreamnt  +downstreamnt
atggcggcgccgctgtcggacctcgtcgaggccggatgggcagacgcactcgaacccgtg
tccggacggatcacggagatgggcgagttcctgcgtgcggaaatcgccgacgggcgtgag
tacctccccgccggagagaacgtcctgagggcgttcacccacccgttctccgaggtcaag
gtcctgatcgtgggccaggacccgtaccccacacccggtcacgcggtcggtctcagtttc
tcggtggccccggacgtgcgcccggtgccacgcagcctcggcaacatcttcaccgagtac
agcaaggacctcggctacgagacgcccaccaccggggacctcacgccgtggtcgcggcag
ggagtgcttctgctgaacagggttctcaccgtgcagcccggacttccggcctcgcaccgg
aagaagggctgggaggcggtgaccgagcaggccattcgcgctctcgtggcgcgccccgaa
cccctcgtcgcaattctgtggggccgggacgcgtccacgttgaaaccgatgctcggcgac
gtgccgaccatcgagtcggcccacccctcaccgttgtccgcctcgcgtggattcttcgga
tcgcggccgttcagccgggcgaacgaactcctcgacggcctgggcgccgagccggtgaac
tggcagctgccgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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