KEGG   Rhodococcus opacus PD630: Pd630_LPD04557
Entry
Pd630_LPD04557    CDS       T03071                                 
Name
(GenBank) 60 kDa chaperonin 3
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:roa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Pd630_LPD04557
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:roa03019]
    Pd630_LPD04557
   03110 Chaperones and folding catalysts [BR:roa03110]
    Pd630_LPD04557
   03029 Mitochondrial biogenesis [BR:roa03029]
    Pd630_LPD04557
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:roa04147]
    Pd630_LPD04557
Enzymes [BR:roa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     Pd630_LPD04557
Messenger RNA biogenesis [BR:roa03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Pd630_LPD04557
Chaperones and folding catalysts [BR:roa03110]
 Heat shock proteins
  HSP60 / Chaperonin
   Pd630_LPD04557
Mitochondrial biogenesis [BR:roa03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    Pd630_LPD04557
Exosome [BR:roa04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   Pd630_LPD04557
  Exosomal proteins of other body fluids (saliva and urine)
   Pd630_LPD04557
  Exosomal proteins of breast cancer cells
   Pd630_LPD04557
  Exosomal proteins of colorectal cancer cells
   Pd630_LPD04557
  Exosomal proteins of bladder cancer cells
   Pd630_LPD04557
SSDB
Motif
Pfam: Cpn60_TCP1
Other DBs
NCBI-ProteinID: AHK31770
Position
4772697..4774346
AA seq 549 aa
MAKELRYNTDARARLEHGVNALADAVKVTLGPKGRNAVLEKLTGPPTITNDGVTIAREIQ
LREPFANMGAQLVKEVAMKTNGVVGDGTTTATVLAQAMVREGLRSVDAGANPMRVRRGIE
RAVSVVVDSLHEQASQIGGQSDLQRIATLAASDDEVIGHAISKAVDYVGKSGVVTTEESD
TLGLSVDIVDGIEFDHGYISGYMVTDPERMEAVHTNPLILLTNKKITQVQDIMPSIEVAK
RADRPLVVLAEEVDGPALQLLVGGNMHKTMQSVVVRAPGFGHRRVAELEDLAVALGGHVI
AKDTGIELSEISVEHLGSCDRITVTENETTIVGGHGDQRLLDARIAQLESQHERAKIEAD
QESLELRIARLTGRVAVIRVGGATSVELKERMLRVEDALAATRAAVEAGIVSGGGTALAQ
SHRALADLDLTGDEAIGCDVVRRALAEPLRWIAINAGFDGDEVVEVVAGLPLGHGFNALT
GEYGDMFDDGVIDPFKVTRAALESAASIAALLITTETAVVEEVLGNPGAIMAPGFGDLAE
GMVRPSNIY
NT seq 1650 nt   +upstreamnt  +downstreamnt
atggcaaaagagctgcggtacaacacggacgcccgggcgcggctcgagcacggcgtcaac
gccctcgccgacgcggtcaaggtgaccctcggccccaaggggcgcaacgcggtgctcgag
aaactcaccggaccaccgacgatcaccaacgacggcgtgaccatcgcccgcgagatccag
ctccgcgaacccttcgccaacatgggtgcccagctggtcaaggaagtggcgatgaagacc
aatggtgtggtcggcgacggcaccaccaccgcgaccgtgctcgcccaggctatggtccga
gaggggctgcggtccgtcgatgccggcgccaaccccatgcgggtgcgccgcggtatcgaa
cgggccgtgtccgtggtcgtcgattccctccacgagcaggcctcccagatcggggggcag
agcgatctgcaacggatcgcgaccctcgccgccagcgacgacgaggtgatcgggcacgcc
atctcgaaggccgtcgactacgtcggcaagtccggggtcgtcaccaccgaggagagcgac
accctcgggctgtcggtcgacatcgtcgacggcatcgagttcgatcacggctacatctcc
ggctacatggtcaccgacccggagcggatggaagcggtgcacaccaatccgctgatcctg
ctgaccaacaagaagatcacccaggtccaagacatcatgccgagcatcgaggtggccaag
cgcgccgaccggccactggtggtgctggcggaggaagtcgacgggccggccctgcaactg
ctcgtcggcggcaacatgcacaagacgatgcagtcggtggtcgtccgggccccaggtttc
gggcaccgccgggtcgccgagctcgaggacctcgcggtggcgctgggtgggcatgtgatc
gccaaggacaccggcatcgaactgtccgaaatcagtgtcgagcatctcggttcgtgtgat
cgcatcaccgtcaccgagaacgagaccacgatcgtcggcgggcacggggaccagcggctg
ctcgacgcccgcatcgcccagctcgagtcccagcacgagcgcgccaagatcgaggcggac
caggagagcctcgaactgcgcattgcccggctcaccggtcgggttgccgtcatccgcgtc
ggcggcgcgaccagcgtcgagctcaaggagcggatgttgcgcgtggaggacgccctggcc
gccactcgggccgcggtggaggcggggatcgtctccggtggtggtaccgcgctggcgcag
tcgcatcgggcgttggccgatctcgacctgaccggcgacgaggccatcgggtgtgacgtc
gtgcgccgcgctctcgccgaaccgctgcgctggatcgcgatcaacgccgggttcgacggc
gacgaggtcgtcgaggtggtcgccggtttgccgctcgggcacgggttcaacgcgctcacc
ggtgaatacggggacatgttcgacgacggggtgatcgatccgttcaaggtcacccgcgcc
gcactcgagagcgcggcctcgatcgcggcactgctgatcaccacggagaccgctgtcgtg
gaagaggtgctgggcaatcccggtgccatcatggcacccggcttcggcgatctcgccgaa
ggcatggtccgcccgtcgaacatctactag

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