KEGG   Rhodococcus opacus PD630: Pd630_LPD06478
Entry
Pd630_LPD06478    CDS       T03071                                 
Name
(GenBank) 4-coumarate--CoA ligase 1
  KO
K01897  long-chain acyl-CoA synthetase [EC:6.2.1.3]
Organism
roa  Rhodococcus opacus PD630
Pathway
roa00061  Fatty acid biosynthesis
roa00071  Fatty acid degradation
roa01100  Metabolic pathways
roa01212  Fatty acid metabolism
roa02024  Quorum sensing
Module
roa_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:roa00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    Pd630_LPD06478
   00071 Fatty acid degradation
    Pd630_LPD06478
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pd630_LPD06478
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:roa01004]
    Pd630_LPD06478
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:roa04147]
    Pd630_LPD06478
Enzymes [BR:roa01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     Pd630_LPD06478
Lipid biosynthesis proteins [BR:roa01004]
 Acyl-CoA synthetase
  Long/very long chain acyl-CoA synthetase
   Pd630_LPD06478
Exosome [BR:roa04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   Pd630_LPD06478
  Exosomal proteins of breast cancer cells
   Pd630_LPD06478
SSDB
Motif
Pfam: AMP-binding AMP-binding_C
Other DBs
NCBI-ProteinID: AHK33664
Position
complement(6702687..6704336)
AA seq 549 aa
MNSAAPVLHYPDLTLAAFPSGMADLYGDKAAMVDGDTVCTYRELDQRSGAFAAALRDAGV
TERDVVLLHLGNCIEFVVAYYGALRAGATVTLVNPLQPGPGLRSQIIDTAAVAAVTQPAQ
LDTLAEAASGTTVRTIVVAGLPAGVGRGQFGFEEFVRGYATAPFTPKVSGDDVAHLAYTG
GTTGLSKGVRVLHRNVLANVTQMIAWRAGHEVRATADGGIELRPVESLGDRGVVPGAGAT
VVVSPLFHAHALINMSFLLLCGATQVFAGRFEPGRMLELIETHRATYITGSPAMWHAVAT
HPDAAVRDTDSVRVVSSGAAPIDHVTLEALGRAFPSASVVEGYGLTEGTCLVASAPLTGS
VAYKLGSVGLPVFDTEVQIRAQDDSGAVLEAGTRGRLWVRGPQVTDGYLNHPEITAQQYV
DGWLDTGDIAYLDEDGYLFICDRTKDMLIYKGYNVYPRELEEILVSHPDVSSAAVVGREA
GSVGQEPVAFVVPMPDVTIDPDAVSAFVAERVLPYKKVRDVVVIEQLPTSAAGKILKTKL
REQLAAATT
NT seq 1650 nt   +upstreamnt  +downstreamnt
gtgaattctgctgcaccggtactgcattaccccgacctgacgttggcggcgttcccgtcc
ggcatggcggacctgtacggagacaaggccgcgatggtcgacggcgacacggtgtgcacc
taccgcgaactcgaccagcggtcgggcgcgttcgccgccgccctgcgggacgcgggggtg
accgagcgtgacgtggtgctcctgcacctcggcaactgcatcgaattcgtcgtggcctac
tacggcgcactgcgggccggcgcgaccgtcaccctggtcaacccgctgcaacccggcccc
ggcctgcgctcgcagatcatcgacacggcggcggtcgccgccgtcacccagcccgcacaa
ctggacaccctcgccgaggcggcgagcggcaccaccgtccgcaccatcgtggtggccgga
ctccccgcgggcgtagggcgcggacagttcgggttcgaggagttcgtccgcgggtacgcc
accgcaccgttcaccccgaaggtgtccggggacgatgtcgcccacctcgcctacacgggc
ggcaccaccgggttgtccaaaggtgtgcgggtactgcaccgcaacgttctcgccaacgtg
acccagatgatcgcctggcgggcgggccacgaggtgcgcgccacggccgacggcgggatc
gaactgcgacccgtcgagagtctcggggaccgcggtgtggtgcccggcgccggagcgacc
gtcgtcgtgtcgccgcttttccacgcgcacgcgctgatcaacatgtcgttcctcctgctg
tgcggggcgacgcaggtgttcgccggacggttcgagccggggcgcatgctggagttgatc
gagacgcaccgcgccacgtacatcaccggcagcccggcgatgtggcatgccgtcgccacc
caccccgacgccgccgttcgggacaccgactcggtgcgggtcgtgtcgtcgggtgcggcg
ccgatcgatcacgtgacactcgaggcgctgggccgggcgttcccgtcggcgagcgtggtc
gaggggtacgggctgaccgagggcacttgcctggtcgcctccgcaccgttgaccggctcc
gtcgcgtacaagctcggcagcgtggggctgccggtgttcgacacggaggtgcagattcgt
gcccaggacgactccggtgccgtactggaggccggcacccgcggcaggctgtgggtccgc
ggcccgcaggtcacggacggctacctgaaccatccggagatcacggcgcagcagtacgtc
gacggctggctcgacaccggcgacatcgcctacctggacgaggacgggtacctgttcatc
tgcgaccgcaccaaggacatgctgatctacaagggctacaacgtgtatccgcgtgagctc
gaggagatcctggtctcgcacccggacgtgtcctcggctgccgtcgtcggcagggaggcc
ggcagcgtcgggcaggagccggtggcgttcgtggtgccgatgccggacgtgacgatcgat
ccggatgcggtgtccgcgttcgtcgccgagcgggtgctgccgtacaagaaggtacgcgac
gtcgtggtgatcgaacagctgccgacgtcggcggccgggaagatcctcaagacgaagctg
cgcgagcaactcgccgccgcgacgacctag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (6)   
   KEGG PATHWAY (5)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (27)   

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