KEGG   Rhodococcus opacus PD630: Pd630_LPD16020
Entry
Pd630_LPD16020    CDS       T03071                                 
Name
(GenBank) Putative peptide import ATP-binding protein
  KO
K02031  peptide/nickel transport system ATP-binding protein
K02032  peptide/nickel transport system ATP-binding protein
Organism
roa  Rhodococcus opacus PD630
Pathway
roa02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:roa00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Pd630_LPD16020
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:roa02000]
    Pd630_LPD16020
Transporters [BR:roa02000]
 ABC transporters, prokaryotic type
  Peptide and nickel transporters
   Peptides/nickel transporter
    Pd630_LPD16020
SSDB
Motif
Pfam: ABC_tran AAA_21 SMC_N AAA_22 AAA_29 AAA_16 TniB AAA_23 nSTAND1 NACHT RsgA_GTPase SbcC_Walker_B nSTAND3 Mg_chelatase AAA_33 ABC_ATPase TsaE Zeta_toxin ATPase MobB AAA_30 PRK cobW NB-ARC NTPase_1 DUF4549 DUF87 ATP_bind_1 AAA_25 T2SSE
Other DBs
NCBI-ProteinID: AHK35979
Position
p8:complement(19486..20907)
AA seq 473 aa
MVADNLTISAPSGSRALLDSGSIELHRGRITAITGESGSGKTTLMQAVLGYLPPGARPES
GSVRVLGHDVLTLPTEPLRRLRRQHLAFVGQDPGSALNPTMRVRALLTEVAKNRDNGDPA
RVLARVQLPESVLHRRPGELSGGQQRRVALARALMRGVDVLLVDEPFAGLDARVRQEIVA
VLRTLANDNDVAIAVSGHDTATLELLADDLVHIGAPPTPGSRPRRESTPDTPHRPVALSG
HGLGLTRGDVPVLSSVDIVAYRGAATAVVGESGAGKTTLARVLAGLEPDATGNLHLDGTE
IALRGSRRPRQLRDRIQLVPQNPLSTLNPQRTVAQSLGRPLVRRGVRARARRAAEIGSLL
DSVGLTHDFASRYPRELSGGQRQRVAIARALAYQPEVLICDEVTSALDHATATSIMDLLH
TVMVDRDSSLIVISHDLDLVRRYCREAVVLDHGRLIDTCSAANILASQSFTPS
NT seq 1422 nt   +upstreamnt  +downstreamnt
gtggtcgccgacaatctcacgatcagcgccccaagcgggtcacgtgcactcctcgacagc
ggatccatcgaactccaccgagggcggatcaccgcgatcaccggcgaatccggctccggc
aagaccaccctgatgcaggcggtcctgggctacctcccacccggcgcccggccggaatcg
ggcagcgtccgcgtcctcgggcacgacgtgctgacgctgcccaccgaacccctgcgccga
ctgcgccgtcagcacctggccttcgtcggccaggaccccggttcggcattgaacccgacc
atgcgagtgcgggccctgttgacggaagtcgccaagaaccgcgacaacggtgatcccgcc
cgggtcctcgcccgggtgcagttgccggagtccgttctccaccggcggcccggagagctc
tcgggcggacagcagcgccgagtcgcgctcgctcgcgcgctgatgcgcggcgtcgacgtc
ctcctggtcgacgaaccgttcgccggattggacgcgcgggtgcggcaggagatcgtcgcg
gtgttgcgcacgctcgcgaacgacaacgacgtggcgatcgccgtgtcgggccacgacacg
gcaaccctggaactactcgccgacgatctcgtccacatcggcgcgcctccgacaccgggt
tcgcgaccacgccgagagtcgacaccggacacgccccacaggcccgttgcgctgtccggg
cacgggctcgggctcacccgcggcgacgtccccgttctgtcttctgtggacatcgtggcc
taccgaggtgccgcgaccgctgtcgtgggtgagtccggtgccgggaagacgacgctcgcc
cgcgtactcgcagggctcgagcccgacgcaaccggcaatcttcacctcgacggcaccgag
atcgccctgcgcggttcacggcggccgcggcagctgcgggatcggatccagctggtgccg
cagaatccgctgtcgacgctcaacccgcaacgcaccgtcgcacagagcctcggacgaccg
ttggtgcgccgcggtgtccgggcgcgtgcacggcgcgcggccgagatcgggtcattgctc
gattccgtgggcctcacacacgacttcgcgtcgcgatatccgcgcgaattatccgggggc
cagcgtcagcgggtggcgattgcccgggcgttggcctaccagcccgaggtgctgatctgc
gacgaggtcacgtccgcgctggatcacgcgacggcgacgtcgatcatggacctgttgcac
accgtcatggtcgaccgggattcctcgctgatcgtgatcagtcacgatctcgatctggtg
cggcggtactgccgcgaggcagtcgtcctcgaccacggacgtctgatcgacacatgttcg
gcagcgaatatcttagcgtcgcaaagctttacgcccagttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (2)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (30)   
   Pfam (30)   
All databases (38)   

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