KEGG   Raoultella ornithinolytica S12: TE10_01650
Entry
TE10_01650        CDS       T03629                                 
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
ron  Raoultella ornithinolytica S12
Pathway
ron03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:ron00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    TE10_01650 (rpoZ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ron03021]
    TE10_01650 (rpoZ)
   03400 DNA repair and recombination proteins [BR:ron03400]
    TE10_01650 (rpoZ)
Enzymes [BR:ron01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     TE10_01650 (rpoZ)
Transcription machinery [BR:ron03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     TE10_01650 (rpoZ)
DNA repair and recombination proteins [BR:ron03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      TE10_01650 (rpoZ)
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-ProteinID: AJF70846
Position
347657..347932
AA seq 91 aa
MARVTVQDAVEKIGNRFDLVLVAARRARQMQVGGKDPLVAEENDKTTVIALREIEEGLIN
NQILDVRDRQEQQEQEAAELQAVTAIAEGRR
NT seq 276 nt   +upstreamnt  +downstreamnt
atggcacgcgtaactgttcaggacgctgtagagaaaattggtaaccgttttgacctggta
ctggtcgccgcgcgtcgcgctcgtcagatgcaggttggcggaaaagatccgctggtagcg
gaagaaaacgataaaactaccgttatcgcactgcgcgaaatcgaagaaggtctgatcaac
aaccagatcctcgacgtgcgcgatcgtcaagaacagcaagagcaggaagccgctgaatta
caagcagttaccgctattgctgaaggtcgtcgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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