KEGG   Raoultella ornithinolytica S12: TE10_21050
Entry
TE10_21050        CDS       T03629                                 
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
ron  Raoultella ornithinolytica S12
Pathway
ron03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ron00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    TE10_21050 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ron03400]
    TE10_21050 (xseA)
Enzymes [BR:ron01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     TE10_21050 (xseA)
DNA repair and recombination proteins [BR:ron03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     TE10_21050 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 tRNA_anti-codon OMPdecase DUF1508
Other DBs
NCBI-ProteinID: AJF74378
Position
4585725..4587095
AA seq 456 aa
MLPSQSPAIFTVSRLNQTVRLLLEQEMGQVWISGEISNFSQPSSGHWYFTLKDDNAQVRC
AMFRNSNRRVTFRPQHGQQVLVRANITLYEPRGDYQIIVESMQPAGEGLLQQKYEQLKAQ
LAAEGLFDQQHKQPLPSPAHCVGVITSKTGAALHDILQVLKRRDPSLPVIVYPTTVQGDD
APGQIVRAIALANQRQECDVLIVGRGGGSLEDLWSFNDERVARAIFASRIPVVSAVGHET
DVTIADFVADLRAPTPSAAAEIVSRNQQELLRQLQSGQQRLEMAMDYFLANRHRRFTQLF
HRLQQQHPQLRLVRQQTALERLRQRMRLALDTQMKRADQRQQRALQRLNAHNPQPRIHRG
QSRIQQLEYRLAESIRARLSEQRERFGNTVTHLEAVSPLATLARGYSVTSASDGSVLKQT
KQVKAGDLLTTRLNDGWVESEVKAITPVKKARAKKK
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgttaccatctcaatcccccgcaatttttacggtcagccgcctaaaccagacggttcgc
ctgctgctggaacaggaaatgggccaggtctggatcagcggcgagatctctaatttcagc
cagccctcttccggccactggtacttcaccttaaaagacgataacgcccaggtgcgctgt
gcgatgttccgcaacagcaaccgccgcgtcaccttccgcccgcagcacgggcagcaggtg
ctggtacgcgccaatatcacgctctacgagccgcgcggcgactatcagatcatcgtcgaa
agcatgcagcccgccggtgaagggctactgcagcagaagtacgaacagctgaaagcacag
ctggcggcagaaggcctgttcgaccagcagcacaagcagccgctcccctccccggcccac
tgcgtaggggtgattacctccaaaaccggcgccgcgctgcacgatattttgcaggtcctc
aaacgccgcgatccctctctgccggttatcgtttatccaacgacggtgcagggtgacgac
gcgccggggcagatcgttcgcgccatcgcgttagccaaccagcgccaggagtgcgacgtg
ctgatcgtcggccgcggcggcggttcgctggaagatttatggagctttaacgatgagcgg
gtggcgcgggcaatttttgccagccgcattccggttgttagcgccgtcggccatgaaacc
gacgtgacgattgccgattttgtcgccgacctgcgggcgcctacgccctctgcggcggcc
gagatcgtcagccgtaaccagcaggagctgctgcgccagctgcagtcagggcagcagcgt
ctggaaatggcgatggactatttcctcgctaaccgccatcgccggtttacccagcttttc
caccgcctgcagcagcagcatccgcagctgcgcttagtgcgtcagcagacggcgcttgag
cggctgcgccagcggatgcgtctggcgcttgatacgcagatgaagcgcgccgatcagcgc
cagcagcgcgcccttcagcgcctgaacgcgcacaatccacagccgcgtattcatcgcggc
cagtcgcgtatccagcagctggaatatcgtctcgccgagagcatccgcgcgcgcctgagc
gaacagcgcgagcgtttcggcaatacggtaacccatctcgaagccgtcagcccgctggcg
accctcgcccgcggctatagcgtcacctccgccagcgacggcagcgtcctgaagcaaacg
aagcaggtgaaggcgggcgatctgctaaccacccgcttaaacgacggctgggttgaaagc
gaagtgaaggcgatcacgccggtcaaaaaagcccgcgcgaagaagaaatag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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