KEGG T00882: ROP

Rhodococcus opacus: ROP_51690

Entry

ROP_51690 CDS T00882

Definition

hypothetical protein

Orthology

K01971

DNA ligase (ATP) [EC:6.5.1.1]

Organism

rop Rhodococcus opacus

Pathway

rop03410	Base excision repair
rop03420	Nucleotide excision repair
rop03430	Mismatch repair
rop03450	Non-homologous end-joining

Class

Genetic Information Processing; Replication and repair; Base excision repair [PATH:rop03410]
Genetic Information Processing; Replication and repair; Nucleotide excision repair [PATH:rop03420]
Genetic Information Processing; Replication and repair; Mismatch repair [PATH:rop03430]
Genetic Information Processing; Replication and repair; Non-homologous end-joining [PATH:rop03450]

SSDB

Motif

Pfam:

DNA_primase_S

Other DBs

NCBI-GI:

NCBI-GeneID:

NITE:

UniProt:

Position

5641495..5642523

AA seq 342 aa
MASPAEELDVDGVAVRLSSPDKIYYPKLGADGGTKRHLVEYYRTVALNGALLGALFDRPT
HLQRFPDGVEGEEIYQKRVPAKRPDHVDSCEVTFPSGRKADVLRVRSAANIVWAANLGNI
TFHPWAVRCPDVDHPDELRIDLDPQPGTGFDDARAVALDVLRPLLDELGLIGYPKTSGGR
GLHVYLRIEPRWDFIEVRRAGIALAREIERRSGDRATTSWWKEERGERIFLDFNQNARDK
TIASAYSARKTPIATVSTPVTWDELVDVHPDDFTIATVPALLEKRGDPMATMGDVAQSLD
VLLEMAERDTANGLGDLPYPPNYPKMPGEPKRVQPSRDRDRK

NT seq 1029 nt +upstreamnt +downstreamnt
atggcgagtcctgccgaagaactcgacgtcgacggcgtcgccgtgcggctgtcgagtccc
gacaagatctactacccgaaactcggtgccgacggcggcacgaaacggcacctggtggag
tactaccggacggtggctctcaacggtgcgctgctgggtgccctgttcgatcggccgacg
cacctgcaacggttcccggacggggtcgagggcgaggagatctaccagaagcgggtgccc
gcgaagcgccccgaccacgtcgactcgtgcgaggtcacgttcccgtccggccgcaaggcc
gacgtgctccgggtgcgcagcgccgcgaacatcgtgtgggcggcgaacctgggcaacatc
acgttccacccgtgggcggtccggtgcccggacgtcgatcaccccgacgaactgcgcatc
gacctggatccgcagcccggcaccggattcgacgacgcccgggcggtcgcgctggacgtg
ctccggccgctgctggacgaactcggtctgatcggctaccccaagacctcgggcggccgc
ggcctgcacgtgtatctccgcatcgagccgcgctgggatttcatcgaggtgcggcgcgcg
ggcatcgccctggcccgggagatcgagcggcgcagcggcgaccgggccaccacgtcctgg
tggaaggaggaacgcggcgaacgcatcttcctcgacttcaaccagaacgcccgggacaag
accatcgcgtccgcgtactcggcccgcaagacgccgatcgcgaccgtgtcgacgccggtc
acgtgggacgaactggtcgacgtccaccccgacgacttcaccatcgcgacggtgcccgct
ctgctcgagaaacgcggcgaccccatggcgaccatgggtgacgtggcgcaatccctcgac
gtgctgctggagatggcggaacgggacaccgcgaacggcctcggcgatctcccgtaccca
cccaattaccccaaaatgccgggagaaccaaagcgggtgcaaccgagtcgggaccgagac
cgcaaatag

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   NITE (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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