KEGG   Raoultella ornithinolytica: RORB6_19370Help
Entry
RORB6_19370       CDS       T02625                                 

Definition
formamidopyrimidine/5-formyluracil/5-hydroxymethyluracil DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
ror  Raoultella ornithinolytica
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:ror00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    RORB6_19370
Enzymes [BR:ror01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     RORB6_19370
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RORB6_19370
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
4275258..4276067
Genome map
AA seq 269 aa AA seqDB search
MPELPEVETSRRGIEPYLVGATILHAVIRNGRLRWPVSEEIYRLSDIPVLSVQRRAKYLL
LELPGGWIIVHLGMSGSLRILSEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTRSL
EGHPALAHLGPEPLSDDFNADYLQQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFSAG
IHPDRLASSLSREECERLVKVIKAVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GELCRVCGTPITASKHAQRATFYCRQCQK
NT seq 810 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaattacctgaggtagaaaccagccggcgtggcatcgaaccatacctggtgggc
gcaaccattctgcacgccgttattcgcaacgggcgtctgcgctggccggtcagtgaagaa
atctatcgtttgagcgacataccggtgctgagcgtgcagcgccgtgccaaatatctgctg
cttgagctgcccggcggctggattatcgtccaccttgggatgtcgggaagtctgcgaatt
ctgagtgaagagctgcctgcagaaaagcacgatcatgttgacctcgtgatgagtaatggc
aaggtcctgcgctacaccgacccacgccgctttggcgcctggctgtggacccgctcgctg
gaagggcatcctgcgctggcacatcttggcccagagcccttgagcgatgattttaatgcc
gactatttgcagcagaagtgcgcgaaaaagaaaaccgctattaagccctggctgatggat
aacaaactggtggtcggggtcggcaatatctacgccagcgaatcgttgttttcggccggg
atccatcccgatcggctggcgtcttcgctttcacgcgaagagtgtgaacggctggtaaaa
gtgattaaagcggtgctgctacgctcgattgagcaggggggcacgacgctgaaggatttc
ctgcaaagtgatggcaagccgggctacttcgcccaggagctgcaggtttatggccgcaag
ggcgaactttgtcgcgtttgcggcacgccgattacagccagcaaacatgctcagcgggca
acattttattgccgccagtgtcagaagtaa

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