KEGG   Roseomonas sp. FDAARGOS_362: CTJ15_03250
Entry
CTJ15_03250       CDS       T05160                                 
Name
(GenBank) ATP-dependent RecD-like DNA helicase
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
ros  Roseomonas sp. FDAARGOS_362
Pathway
ros03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:ros00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    CTJ15_03250
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ros03400]
    CTJ15_03250
Enzymes [BR:ros01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     CTJ15_03250
DNA repair and recombination proteins [BR:ros03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     CTJ15_03250
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 UvrD_C_2 SH3_13 HHH_5 Viral_helicase1 AAA_11 PIF1 AAA_16 nSTAND3 HHH_2 MeaB NTPase_1 RsgA_GTPase Helicase_RecD AAA_22 AAA_5 AAA_29 T2SSE UvrD-helicase AAA_28 TrwB_AAD_bind MobB AAA ABC_tran NACHT cobW ATP_bind_1 TsaE AAA_23 MMR_HSR1 DEAD SLFN-g3_helicase ABC_ATPase NB-ARC CbiA ATPase_2
Other DBs
NCBI-ProteinID: ATR19396
UniProt: A0A2D2H044
Position
unnamed-a:complement(44254..46452)
AA seq 732 aa
MPGIPAPSPAPADRGLPTEALAGLVERVTYHSAENGFCVLRVKARGHRDPVTVVGHAASI
SAGEWVQMSGAWVNDRAHGLQFRAGFLKATQPTTREGIEKYLGSGMIRGIGPVYAARLVA
AFGEAVFELIEAEPARLREVTGIGPRRAARIVAGWAGQKVIREIMLFLHANGVGTSRAVR
IYKTYGARAVEVITENPYRLARDIRGIGFRTADTVAGRLGIEPTAMIRVRAGISFALAEA
TGEGHCGLPVGELTALAGKLLEVSPELIEAALALELDAGEVVTDTLEGGPCVFLAGLYRA
EQEIAGRLRRLAAGRQPWPAIDADRAIPWVEERTGLTLAASQREALRLALSSKVLVITGG
PGVGKTTLVNAILRVIRARGVEVALCAPTGRAARRLSESTGLEARTIHRLLESDPKTGGF
KRDETNPLACQLLVADETSMVDVPLMRALLRALPDEAALLLVGDVDQLPSVGPGQVLADV
IGSGVLPVVRLTEVFRQAAESRIVTSAHRINRGRLPELEATAGSDFFFVGAEEPEEGVRK
LLTLVGERIPARFGLDPIRDVQVLCPMNRGGLGARALNAALQAALNPPGDLRVERFGWTF
GPGDKVMQVANSYDREVFNGDLGVITGVDLEEGELTVVFDGREVAYGFGELDELVLAYAT
TIHKAQGSEYPAVVIPLSTQHYAMLARNLLYTGVTRGRKLVVLLGQRRALAIAVRNQGMR
RRWSKLREWLAL
NT seq 2199 nt   +upstreamnt  +downstreamnt
atgcccggcatcccggccccctcccctgccccggcggatcgcggcctgcccaccgaggcg
ctggccgggctggtggaacgcgtcacctaccacagcgccgagaacggcttctgcgtgctg
cgggtcaaggcgcgcggccaccgcgacccggtcaccgtggtgggccacgccgcctcgatc
tcggccggcgaatgggtgcagatgtcgggcgcctgggtcaacgaccgcgcccacggcctg
cagttcagggcaggcttcctcaaggccacccaacccacgacgcgcgagggcatcgagaag
tacctgggctcgggcatgatccgcggcatcggtccggtctacgcggccaggctggtggcg
gccttcggcgaggcggtgttcgagctgatcgaggccgagcccgcccggctgcgcgaggtc
accggcatcggccccaggcgtgcggcgcgcatcgtcgccggctgggccgggcagaaggtg
atccgcgagatcatgctgttcctgcatgccaacggggtgggcacctcgcgcgcggtacgg
atctacaagacctacggagcgcgggccgtggaggtgatcacggagaacccctaccgcctg
gcgcgcgacatccgcggcatcggcttccgcaccgccgacaccgtggcgggcaggctcggc
atcgagcccacggcgatgatccgggtccgcgccgggatctccttcgcgctcgccgaggcc
accggtgaggggcactgcggcctgccggtgggcgagctgaccgcgctcgcgggcaagctg
ctggaggtgagtcccgagctgatcgaggcggccctggctctcgaactcgacgccggcgag
gtggtgaccgacacgctggagggcgggccttgtgtgttcctggccgggctgtaccgcgcc
gagcaagagatcgccgggcggctgcggcggctggccgcgggccggcagccctggcccgcc
atcgatgccgaccgggcgatcccctgggtggaggagcggaccgggctgacgcttgcggcc
agccagcgcgaggcgctgcggctggcgctctcctccaaggtgctggtgatcaccggcggc
ccgggtgtgggcaagaccacgctggtgaacgccatcctgcgggtgatccgggccaggggg
gtggaggtggcgctctgcgccccgacgggacgggcggccaggcgcctgagcgagagcacg
gggctggaggcgcggaccatccaccggctgctggagagcgacccgaagaccggtgggttc
aagcgcgacgagacgaaccccttggcctgccagctgctggtggccgacgagacctcgatg
gtggacgtgccgctgatgcgcgccctgctgcgggcgctgcccgacgaggcggcgctgctg
ctggtgggcgacgtggaccagctcccctcggtgggccccgggcaggtgctggccgacgtc
atcggctcgggcgtcctgccggtggtgcggctgaccgaggtgttccgccaggcggccgag
agccggatcgtgaccagtgcccaccgcatcaaccgcggtcggctgccggagctcgaggcg
acggcgggcagcgatttcttcttcgtcggggcggaggagccggaggagggtgtgcgcaag
ctgctcaccctggtgggcgagcgcatcccggcgcgcttcgggctggatccgatccgcgac
gtgcaggtgctctgcccgatgaaccggggcgggctgggggccagggcgctgaacgccgcg
ctgcaggcggcgctgaacccgcccggggacctcagggtcgagcgcttcggctggaccttc
ggccccggcgacaaggtcatgcaggtggccaacagctacgaccgggaggtgttcaacggc
gacctcggcgtgatcacaggggtggacctggaggagggcgagctcacggtggtcttcgac
gggcgggaggtcgcctacggcttcggggagctggacgagctggtgctggcctacgccacc
accatccacaaggcccagggctcggagtacccggcggtggtgatcccgctcagcacgcag
cactacgccatgctggcgcgcaacctgctctacaccggcgtgacgcggggccggaagctg
gtggtgctgctcgggcagcgccgggccctggcgatcgccgtgcgcaaccagggcatgcgc
cggcgctggtcgaagctccgggagtggctggctctgtag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (38)   
   Pfam (38)   
All databases (48)   

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