KEGG   Roseomonas sp. FDAARGOS_362: CTJ15_11785
Entry
CTJ15_11785       CDS       T05160                                 
Name
(GenBank) ATP-dependent helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:3.6.4.13]
Organism
ros  Roseomonas sp. FDAARGOS_362
Pathway
ros03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ros00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CTJ15_11785
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ros03019]
    CTJ15_11785
Messenger RNA biogenesis [BR:ros03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     CTJ15_11785
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25 NACHT
Other DBs
NCBI-ProteinID: ATR20911
UniProt: A0A2D2H4G4
Position
1485883..1487295
AA seq 470 aa
MTDFLTLGLASPILRALDEEGYTTPTPIQAQAIPAAMEGRDVLGIAQTGTGKTAAFALPL
LHRLIMDKRRAPPTGCRALILSPTRELAAQIHDSIKAYGRHLGLRSALIFGGVPENPQRR
ALSGGVDIIVATPGRLLDHIGTRNCRLDSLEAFILDEADQMLDRGFWPAIRRISGMLPKQ
RHTMFFSATMPEAIASLAKDLLREPVKVEVTPVATTAERVNQRAIHVSRDGKRTVLADIL
RKPEVGRTLVFSRTKHGADRIVKQLEQDGLAANAIHGNKSQGQRERALDAFKRGTAPILV
ATDIAARGIDVSGVTHVIQYDLPEVPETYVHRIGRTARAGASGEAIALVSLDDVPLLRAV
EKLTRQAVPAEGDIPTGPVPRAPGRQQNRGRGGQGRPGGAPRPAGGHGAGGHGRGDARRP
QFAGDRKPSGGRPQGEGRDRRADHARHEGEAKNRSWRDSDFRDTDRSGTR
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgaccgatttcctgaccctcggcctcgcgtcgcccatcctgcgcgcgctggacgaagag
ggctacaccaccccgaccccgatccaggcccaggccatcccggccgccatggaagggcgg
gacgtgctgggcatcgcccagaccggcactggcaagaccgcggccttcgcgctgccgctg
ctgcaccgcctgatcatggacaagcgccgtgccccgccgaccggctgccgcgcgctgatc
ctgtcgccgacgcgggaactggcggcgcagatccatgacagcatcaaggcctatggccgc
cacctgggcctgcgcagcgcgctgatcttcggcggcgtgccggagaacccgcagcgccgc
gcgctgtcgggcggcgtggacatcatcgtcgccacgccgggccgcctgctggaccatatc
ggcacgcgcaactgccgcctggactcgctggaggccttcatcctcgacgaggccgaccag
atgctggaccggggcttctggcccgcgatccgccgcatctcggggatgctgccgaagcag
cgccacacgatgttcttctcggccaccatgccggaggccatcgcctcgctcgccaaggac
ctgctgcgcgagccggtgaaggtcgaggtcacgcccgtcgccaccaccgcggagcgggtg
aaccagcgcgccatccatgtgagccgcgacggcaagcgcacggtgctggccgacatcctc
cgcaagccggaagtgggccgcaccctggtcttctcccgcaccaagcacggcgctgaccgc
atcgtgaagcagttggagcaggacgggctcgccgccaacgcgatccatggcaacaagagc
cagggccagcgtgagcgcgcgctcgacgccttcaagcgcggcacggcgccgatcctggtc
gcgaccgacatcgccgcgcgcggcatcgacgtgtccggcgtgacgcatgtgatccagtac
gacctgccggaagtgccggagacctatgtccaccgcatcggccgcaccgcgcgcgccggc
gcctcgggcgaggccatcgccctggtgtcgctggacgacgtgccgctgctgcgcgcggtc
gagaagctgacgcgccaggcggttccggccgagggcgacatcccgaccggcccggtgccg
cgcgcgcccgggcgccagcagaaccgtggccgtggcggccagggccgccccggcggcgcg
ccccgaccggcgggtgggcacggcgccggcggccacggccgcggcgatgcccgccgcccg
cagttcgcgggtgaccgcaagccgtcgggcggccgcccgcagggcgagggccgcgaccgt
cgcgccgatcacgcgcgccacgagggcgaggccaagaaccgttcctggcgggacagcgac
ttccgcgacacggaccgttccggcacgcgctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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