KEGG   RPAIR: RP11103Help
Entry
RP11103                     RPair                                  

Name
C00353_C04217
Compound
C00353  
Geranylgeranyl diphosphate
C04217  
all-trans-Pentaprenyl diphosphate
Type
trans
RDM
1
1     C1b-C1b:O2b+*-*+C1b:C2b-C2b
Related pair
Reaction
Enzyme
KCF data Show

ALIGN       20
            1    10:C1a  25:C1a
            2    11:C2c   3:C2c
            3    12:C2b   2:C2b
            4    13:C1b   4:C1b
            5    14:C1b   9:C1b
            6    15:C2c   7:C2c
            7    16:C2b   6:C2b
            8    17:C1b   8:C1b
            9    18:C1b  14:C1b
            10   19:C2c  12:C2c
            11   20:C2b  11:C2b
            12   21:C1b  13:C1b
            13   22:C1b  19:C1b
            14   23:C2c  17:C2c
            15   24:C2b  16:C2b #M1
            16   25:C1b  18:C1b #R1
            17   26:C1a   5:C1a
            18   27:C1a  10:C1a
            19   28:C1a  15:C1a
            20   29:C1a  20:C1a
            -     1:O2b     *   #D1
            -       *    23:C1b #D1
ENTRY1      
 COMPOUND  C00353
 ATOM      29
            1   O2b O     8.2375   -2.1333
            2   P1b P     8.9858   -2.1299
            3   O2c O     9.7375   -2.1299
            4   O1c O     8.9858   -1.3781
            5   O1c O     8.9893   -2.8781
            6   P1b P    10.4858   -2.1299
            7   O1c O    11.2375   -2.1299
            8   O1c O    10.4858   -1.3781
            9   O1c O    10.4858   -2.8781
            10  C1a C    -3.1625   -2.1667
            11  C2c C    -2.4500   -1.7542
            12  C2b C    -1.7375   -2.1625
            13  C1b C    -1.0250   -1.7500
            14  C1b C    -0.3125   -2.1583
            15  C2c C     0.4000   -1.7458
            16  C2b C     1.1125   -2.1542
            17  C1b C     1.8250   -1.7417
            18  C1b C     2.5375   -2.1500
            19  C2c C     3.2500   -1.7375
            20  C2b C     3.9625   -2.1458
            21  C1b C     4.6750   -1.7333
            22  C1b C     5.3875   -2.1417
            23  C2c C     6.1000   -1.7292
            24  C2b C     6.8125   -2.1375
            25  C1b C     7.5250   -1.7250
            26  C1a C    -2.4542   -0.9292
            27  C1a C     0.3958   -0.9208
            28  C1a C     3.2458   -0.9125
            29  C1a C     6.0958   -0.9042
 BOND      28
            1     6   7 1
            2    15  16 2
            3     6   8 1
            4    16  17 1
            5     6   9 2
            6    17  18 1
            7    18  19 1
            8     1   2 1
            9    19  20 2
            10   10  11 1
            11   20  21 1
            12    2   3 1
            13   21  22 1
            14   11  12 2
            15   22  23 1
            16    2   4 1
            17   23  24 2
            18   12  13 1
            19   24  25 1
            20   25   1 1
            21    2   5 2
            22   11  26 1
            23   13  14 1
            24   15  27 1
            25    3   6 1
            26   19  28 1
            27   14  15 1
            28   23  29 1
ENTRY2      
 COMPOUND  C04217
 ATOM      34
            1   C1b C    -0.5212   -5.4331
            2   C2b C    12.0769   -5.8137
            3   C2c C    12.8205   -5.4262
            4   C1b C    11.3249   -5.4262
            5   C1a C    12.8205   -4.6428
            6   C2b C     9.0899   -5.8137
            7   C2c C     9.8376   -5.4262
            8   C1b C     8.3504   -5.4262
            9   C1b C    10.5813   -5.8137
            10  C1a C     9.8376   -4.6428
            11  C2b C     6.1070   -5.8137
            12  C2c C     6.8506   -5.4262
            13  C1b C     5.3634   -5.4262
            14  C1b C     7.5942   -5.8137
            15  C1a C     6.8506   -4.6428
            16  C2b C     3.1282   -5.8137
            17  C2c C     3.8719   -5.4262
            18  C1b C     2.3846   -5.4262
            19  C1b C     4.6197   -5.8137
            20  C1a C     3.8719   -4.6428
            21  C2b C     0.1858   -5.8122
            22  C2c C     0.9130   -5.4331
            23  C1b C     1.6318   -5.8122
            24  C1a C     0.9130   -4.6824
            25  C1a C    13.5625   -5.8125
            26  O2b O    -1.3222   -5.9139
            27  P1b P    -2.1460   -5.9129
            28  O2c O    -2.9625   -5.9164
            29  O1c O    -2.1426   -5.0930
            30  O1c O    -2.1460   -6.7329
            31  P1b P    -3.7859   -5.9129
            32  O1c O    -4.6059   -5.9129
            33  O1c O    -3.7859   -5.0930
            34  O1c O    -3.7893   -6.7329
 BOND      33
            1    14   8 1
            2    16  17 2
            3    16  18 1
            4    17  19 1
            5    17  20 1
            6    19  13 1
            7     1  21 1
            8    21  22 2
            9    22  23 1
            10   22  24 1
            11   23  18 1
            12    2   3 2
            13    2   4 1
            14    3  25 1
            15    3   5 1
            16    6   7 2
            17    1  26 1
            18    6   8 1
            19    7   9 1
            20    7  10 1
            21    9   4 1
            22   11  12 2
            23   11  13 1
            24   12  14 1
            25   12  15 1
            26   26  27 1
            27   27  28 1
            28   27  29 1
            29   27  30 2
            30   28  31 1
            31   31  32 1
            32   31  33 1
            33   31  34 2

DBGET integrated database retrieval system