KEGG   RPAIR: RP15324Help
Entry
RP15324                     RPair                                  

Name
C04121_C19876
Compound
C04121  
CMP-3-deoxy-D-manno-octulosonate
C19876  
alpha-Kdo-(2->8)-[alpha-Kdo-(2->4)]-alpha-Kdo-(2->4)-alpha-Kdo-(2->6)-lipid IVA
Type
trans
RDM
1
1     C1z-C1z:O2b+*-*+O2a:C1x+C6a+O2x-C1x+C6a+O2x
Related pair
Reaction
Enzyme
KCF data Show

ALIGN       15
            1     1:C1z   1:C1z #R1
            2     2:O2x   2:O2x #M1
            3     3:C1x   3:C1x #M1
            4     5:C6a   9:C6a #M1
            5     6:C1y   4:C1y
            6     7:C1y  12:C1y
            7     9:O6a  14:O6a
            8    10:O6a  15:O6a
            9    11:C1y   5:C1y
            10   12:O1a  13:O1a
            11   32:C1c   6:C1c
            12   33:C1b   7:C1b
            13   34:O1a  10:O1a
            14   35:O1a  11:O1a
            15   36:O1a   8:O1a
            -     4:O2b     *   #D1
            -       *   116:O2a #D1
ENTRY1      
 COMPOUND  C04121
 ATOM      36
            1   C1z C    18.8934  -16.0804
            2   O2x O    17.7512  -15.4190
            3   C1x C    18.8934  -17.3946
            4   O2b O    20.9894  -17.6555
            5   C6a C    20.0222  -15.4190
            6   C1y C    16.6109  -16.0804
            7   C1y C    17.7512  -18.0731
            8   P1b P    22.3107  -17.6555
            9   O6a O    19.9932  -14.1106
            10  O6a O    21.1515  -16.0804
            11  C1y C    16.6109  -17.3946
            12  O1a O    17.7571  -19.3759
            13  O2b O    23.6136  -17.6555
            14  O1c O    22.3107  -19.1038
            15  O1c O    22.3107  -16.1324
            16  C1b C    24.9291  -17.6555
            17  C1y C    26.1744  -18.0443
            18  O2x O    27.2346  -17.2727
            19  C1y C    26.5918  -19.2896
            20  C1y C    28.3119  -18.0615
            21  C1y C    27.9245  -19.2896
            22  O1a O    25.8386  -20.3556
            23  N4y N    29.1468  -15.8652
            24  O1a O    28.6948  -20.3441
            25  C8y C    27.9991  -15.1995
            26  C8x C    30.2933  -15.2225
            27  N5x N    27.9590  -13.8841
            28  O5x O    26.8700  -15.8478
            29  C8x C    30.2933  -13.8898
            30  C8y C    29.1526  -13.2239
            31  N1a N    29.1526  -11.9141
            32  C1c C    15.4124  -15.3677
            33  C1b C    15.4173  -13.9912
            34  O1a O    14.2276  -13.2989
            35  O1a O    15.2017  -18.3548
            36  O1a O    14.2105  -16.0485
 BOND      38
            1     1   2 1
            2     1   3 1
            3     1   4 1 #Up
            4     1   5 1 #Down
            5     2   6 1
            6     3   7 1
            7     4   8 1
            8     5   9 1
            9     5  10 2
            10    6  11 1
            11    7  12 1 #Up
            12    8  13 1
            13    8  14 1
            14    8  15 2
            15   13  16 1
            16   17  16 1 #Up
            17   17  18 1
            18   17  19 1
            19   18  20 1
            20   19  21 1
            21   19  22 1 #Down
            22   20  23 1 #Up
            23   21  24 1 #Down
            24   23  25 1
            25   23  26 1
            26   25  27 1
            27   25  28 2
            28   26  29 2
            29   27  30 2
            30   30  31 1
            31    7  11 1
            32   20  21 1
            33   29  30 1
            34    6  32 1 #Up
            35   32  33 1
            36   33  34 1
            37   11  35 1 #Up
            38   32  36 1 #Down
ENTRY2      
 COMPOUND  C19876
 ATOM      155
            1   C1z C    12.7560  -14.2982
            2   O2x O    11.4948  -13.6676
            3   C1x C    12.7560  -15.6995
            4   C1y C    10.3037  -14.3683
            5   C1y C    10.3037  -15.7696
            6   C1c C     9.1125  -13.7377
            7   C1b C     9.0425  -12.3364
            8   O1a O     7.9214  -14.4383
            9   C6a C    13.7369  -15.3492
            10  O1a O     7.7813  -11.7058
            11  O1a O     9.1826  -16.4703
            12  C1y C    11.5649  -16.4002
            13  O1a O    11.5649  -17.8015
            14  O6a O    15.1022  -15.0334
            15  O6a O    13.3278  -16.6895
            16  C6a C     9.7570   -5.2727
            17  C1z C     8.6346   -5.9743
            18  O2x O     7.3718   -5.3429
            19  C1x C     8.6346   -7.3774
            20  C1y C     6.1792   -6.0444
            21  C1y C     7.4420   -8.0790
            22  C1y C     6.1792   -7.4476
            23  C1c C     4.9866   -5.4130
            24  O1a O     7.4420   -9.4820
            25  O1a O     5.0567   -8.1491
            26  C1b C     4.9164   -4.0099
            27  O1a O     3.7939   -6.1146
            28  O6a O    10.9497   -5.9743
            29  O6a O     9.7382   -3.8697
            30  C1y C    21.6433  -13.7845
            31  C1y C    20.4311  -13.0851
            32  C1y C    22.8560  -13.0851
            33  O7a O    21.6433  -15.1835
            34  C1y C    20.4311  -11.6859
            35  O2b O    19.2091  -13.7845
            36  C1y C    22.8560  -11.6859
            37  N1b N    24.0687  -13.7751
            38  C7a C    20.4403  -15.8829
            39  O2x O    21.6433  -10.9772
            40  C1b C    19.1391  -10.9772
            41  P1b P    17.8101  -13.7751
            42  O2a O    24.0687  -10.9772
            43  C5a C    24.0687  -15.1835
            44  C1b C    20.4403  -17.2914
            45  O6a O    19.2091  -15.1835
            46  O2a O    19.1391   -9.5780
            47  O1c O    17.8006  -12.3761
            48  O1c O    16.4017  -13.7751
            49  O1c O    17.8004  -15.1742
            50  C1b C    25.2718  -10.2869
            51  C1b C    25.2718  -15.8829
            52  O5a O    22.8560  -15.8829
            53  C1c C    19.2186  -17.9817
            54  C1z C    19.1904   -8.1694
            55  C1y C    26.4935  -10.9772
            56  C1c C    25.2812  -17.2914
            57  C1b C    19.2186  -19.3901
            58  O1a O    18.0059  -17.2914
            59  C1x C    17.9780   -8.8784
            60  O2x O    19.1904   -6.7705
            61  C6a C    20.4681   -8.6825
            62  C1y C    26.4935  -12.3853
            63  O2x O    27.7062  -10.2869
            64  C1b C    24.0687  -17.9817
            65  O1a O    26.5030  -17.9912
            66  C1b C    18.0059  -20.0896
            67  C1y C    16.7654   -8.1694
            68  C1y C    17.9780   -6.0710
            69  O6a O    20.5338   -9.9133
            70  O6a O    21.6247   -7.9363
            71  C1y C    27.7062  -13.0851
            72  O1a O    25.2718  -12.7352
            73  C1y C    28.9188  -10.9772
            74  C1b C    24.0687  -19.3809
            75  C1b C    18.0059  -21.4981
            76  O2a O    15.6739   -8.9156
            77  C1y C    16.7654   -6.7705
            78  C1c C    17.8660   -4.6438
            79  C1y C    28.9188  -12.3853
            80  O7a O    27.7062  -14.4839
            81  O2b O    30.1313  -10.2869
            82  C1b C    22.8560  -20.0896
            83  C1b C    16.7933  -22.1883
            84  C1z C    14.4990   -9.6338
            85  O1a O    15.5250   -6.1453
            86  C1b C    19.0226   -3.8789
            87  O1a O    16.6348   -4.0001
            88  N1b N    30.9705  -13.0851
            89  C7a C    28.9279  -15.1835
            90  P1b P    30.1313   -8.8876
            91  C1b C    22.8560  -21.4981
            92  C1b C    16.7933  -23.5968
            93  O2x O    13.2770   -8.9809
            94  C1x C    14.5363  -11.0845
            95  C6a C    15.6927  -10.3147
            96  O1a O    19.0271   -2.5077
            97  C5a C    32.1924  -12.3761
            98  C1b C    28.9279  -16.5828
            99  O6a O    30.1313  -14.4839
            100 O1c O    28.7230   -8.8784
            101 O1c O    30.1219   -7.4792
            102 O1c O    31.5304   -8.8784
            103 C1b C    21.6433  -22.1883
            104 C1b C    15.5806  -24.2961
            105 C1y C    12.0224   -9.6899
            106 C1y C    13.3423  -11.7512
            107 O6a O    16.8775   -9.6151
            108 O6a O    15.7021  -11.6952
            109 C1b C    33.4051  -13.0851
            110 O5a O    32.2531  -10.9772
            111 C1c C    30.1405  -17.2822
            112 C1b C    21.6433  -23.5873
            113 C1b C    15.5806  -25.6952
            114 C1y C    12.0596  -11.0797
            115 C1c C    10.8707   -9.0278
            116 O2a O    13.3095  -13.1411
            117 C1c C    33.4051  -14.4839
            118 C1b C    30.1405  -18.6907
            119 O1a O    31.3532  -16.5828
            120 C1b C    20.4403  -24.2961
            121 C1b C    14.3683  -26.3950
            122 O1a O    10.9266  -11.8072
            123 C1b C    10.8426   -7.6472
            124 O1a O     9.6860   -9.7459
            125 C1b C    34.6083  -15.1835
            126 O1a O    32.1924  -15.1835
            127 C1b C    31.3624  -19.3809
            128 C1b C    20.4403  -25.7047
            129 C1b C    14.3683  -27.7939
            130 O2a O     9.6206   -6.9942
            131 C1b C    34.5987  -16.6014
            132 C1b C    31.3624  -20.7799
            133 C1b C    19.2278  -26.4041
            134 C1b C    13.1558  -28.4934
            135 C1b C    35.8393  -17.3196
            136 C1b C    32.5749  -21.4981
            137 C1b C    19.2278  -27.8031
            138 C1a C    13.1558  -29.9018
            139 C1b C    35.8299  -18.7465
            140 C1b C    32.5749  -22.8973
            141 C1a C    18.0151  -28.5028
            142 C1b C    37.0612  -19.4553
            143 C1b C    33.7875  -23.5782
            144 C1b C    37.0518  -20.8545
            145 C1b C    33.7875  -24.9865
            146 C1b C    38.2644  -21.5632
            147 C1b C    34.9907  -25.6860
            148 C1b C    38.2552  -22.9625
            149 C1b C    34.9907  -27.0850
            150 C1b C    39.4675  -23.6619
            151 C1b C    36.2033  -27.7844
            152 C1b C    39.4675  -25.0611
            153 C1a C    36.2033  -29.1928
            154 C1a C    40.6801  -25.7700
            155 O1a O     3.6677   -3.3699
 BOND      160
            1     1   2 1
            2     1   3 1
            3     2   4 1
            4     4   5 1
            5     4   6 1 #Up
            6     6   7 1
            7     6   8 1 #Down
            8     1   9 1 #Up
            9     7  10 1
            10    5  11 1 #Up
            11   12   5 1
            12    3  12 1
            13   12  13 1 #Up
            14    9  14 1
            15    9  15 2
            16   17  16 1 #Up
            17   17  18 1
            18   17  19 1
            19   18  20 1
            20   19  21 1
            21   20  22 1
            22   20  23 1 #Up
            23   21  24 1 #Up
            24   22  25 1 #Up
            25   23  26 1
            26   23  27 1 #Down
            27   21  22 1
            28   16  28 1
            29   16  29 2
            30   30  31 1
            31   30  32 1
            32   30  33 1 #Up
            33   31  34 1
            34   31  35 1 #Down
            35   32  36 1
            36   32  37 1 #Down
            37   33  38 1
            38   34  39 1
            39   34  40 1 #Up
            40   35  41 1
            41   36  42 1 #Up
            42   37  43 1
            43   38  44 1
            44   38  45 2
            45   40  46 1
            46   41  47 1
            47   41  48 1
            48   41  49 2
            49   42  50 1
            50   43  51 1
            51   43  52 2
            52   44  53 1
            53   46  54 1
            54   55  50 1 #Up
            55   51  56 1
            56   53  57 1
            57   53  58 1 #Up
            58   54  59 1
            59   54  60 1
            60   54  61 1 #Up
            61   55  62 1
            62   55  63 1
            63   56  64 1
            64   56  65 1 #Down
            65   57  66 1
            66   59  67 1
            67   60  68 1
            68   61  69 1
            69   61  70 2
            70   62  71 1
            71   62  72 1 #Down
            72   63  73 1
            73   64  74 1
            74   66  75 1
            75   67  76 1 #Up
            76   67  77 1
            77   68  78 1 #Up
            78   71  79 1
            79   71  80 1 #Up
            80   73  81 1 #Down
            81   74  82 1
            82   75  83 1
            83   84  76 1 #Down
            84   77  85 1 #Up
            85   78  86 1
            86   78  87 1 #Down
            87   79  88 1 #Down
            88   80  89 1
            89   81  90 1
            90   82  91 1
            91   83  92 1
            92   84  93 1
            93   84  94 1
            94   84  95 1 #Up
            95   86  96 1
            96   88  97 1
            97   89  98 1
            98   89  99 2
            99   90 100 1
            100  90 101 1
            101  90 102 2
            102  91 103 1
            103  92 104 1
            104  93 105 1
            105  94 106 1
            106  95 107 1
            107  95 108 2
            108  97 109 1
            109  97 110 2
            110  98 111 1
            111 103 112 1
            112 104 113 1
            113 105 114 1
            114 105 115 1 #Up
            115 106 116 1 #Up
            116 109 117 1
            117 111 118 1
            118 111 119 1 #Down
            119 112 120 1
            120 113 121 1
            121 114 122 1 #Up
            122 115 123 1
            123 115 124 1 #Down
            124 117 125 1
            125 117 126 1 #Up
            126 118 127 1
            127 120 128 1
            128 121 129 1
            129 123 130 1
            130 125 131 1
            131 127 132 1
            132 128 133 1
            133 129 134 1
            134 131 135 1
            135 132 136 1
            136 133 137 1
            137 134 138 1
            138 135 139 1
            139 136 140 1
            140 137 141 1
            141 139 142 1
            142 140 143 1
            143 142 144 1
            144 143 145 1
            145 144 146 1
            146 145 147 1
            147 146 148 1
            148 147 149 1
            149 148 150 1
            150 149 151 1
            151 150 152 1
            152 151 153 1
            153 152 154 1
            154  36  39 1
            155  68  77 1
            156  73  79 1
            157 106 114 1
            158  17 130 1 #Down
            159  26 155 1
            160   1 116 1 #Down

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