KEGG   Rhodopseudomonas palustris CGA009: RPA0084Help
Entry
RPA0084           CDS       T00153                                 

Gene name
mutM
Definition
formamidopyrimidine-DNA glycosylase
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rpa  Rhodopseudomonas palustris CGA009
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rpa00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    RPA0084 (mutM)
Enzymes [BR:rpa01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     RPA0084 (mutM)
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RPA0084 (mutM)
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
CyanoBase: 
CYORF: 
UniProt: 
Position
96685..97560
Genome map
AA seq 291 aa AA seqDB search
MPELPEVETVRRGLQPAMEGFRIDRAVAHRENLRFPLQKDFVARLTGQTVTGLGRRAKYL
LADLSSGDVLLMHLGMSGSFRVVEADGETRPGEFHYPRSEDRTHDHVVFEMASGARVVFN
DPRRFGFMKVFPRSEIETEPHLKGLGPEPLGNAFDASLLAKACAGKQTSLKAALLDQRVV
AGLGNIYVCEALFRAHLSPKRKASTLANRKDEPTDHAVRLTEAIREVLGEAIKAGGSSLR
DHRQTSGELGYFQHAFKVYDREGEPCPTCGGTVQRFVQNGRSTFWCPKCQK
NT seq 876 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactccccgaagtcgagaccgtccgccgcgggctgcagccggcgatggagggc
tttcggatcgaccgcgcggtggcgcaccgggagaatctgcggtttccgctgcagaaggac
ttcgtcgcccgcctcaccggccagaccgtcaccggcctcggccggcgtgccaaatatctg
ctggcggatctgtcgagcggcgacgtgctgctgatgcatctcgggatgtccggctcattc
cgggtggtcgaggccgacggcgagaccaggccgggcgagtttcattatccgcgcagcgag
gaccgcacccatgaccacgtggtgttcgaaatggcgtccggcgcccgcgtcgtgttcaac
gatccgcgccggttcggcttcatgaaggtgtttccgcgcagcgagatcgaaaccgagccc
catctgaagggcctcggccccgagccgctcggcaacgcgttcgacgccagcctgctggcg
aaggcctgcgccggaaagcagaccagcctcaaggcggcgctgctcgatcagcgcgtggtt
gccgggctcggcaacatctatgtctgcgaagcgctgttccgcgcgcatctgtcgccgaaa
cgcaaagcctcgaccctggccaatcgcaaggacgagccgaccgaccacgcggtgcggctg
accgaggcgatccgcgaggtgctcggcgaagcgatcaaggccggcggctcgtcactgcgc
gaccaccgccagaccagtggcgagctcggttactttcagcacgcgttcaaggtttacgac
cgcgaaggcgaaccctgcccgacctgcggcggcacggtgcagcgcttcgtgcagaacggc
cggtcgacgttctggtgcccgaagtgccagaagtaa

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