KEGG   Rhodopseudomonas palustris HaA2: RPB_0379
Entry
RPB_0379          CDS       T00321                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
rpb  Rhodopseudomonas palustris HaA2
Pathway
rpb03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:rpb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    RPB_0379
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:rpb03400]
    RPB_0379
Enzymes [BR:rpb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     RPB_0379
DNA repair and recombination proteins [BR:rpb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     RPB_0379
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: ABD05090
UniProt: Q2J370
Position
420707..421519
AA seq 270 aa
MSFTLTTWNINSVRLRIELVAKFLKAQRPDVLCLQETKCPDDAFPAKRFKRLGYEHIALN
GQKGYHGVAVISKIPFLATDIRTFCDNIDSRHISVSLQTGAADPPLLLHNFYVPAGGDIP
DPEANPKFKHKLSFLDEMRACAPLHPSGDARHILVGDLNVAPHEHDVWSHKQLLKVVSHT
PVECDKLLAVQAAGNWVDVARERIPLSEKIYTWWSYRAADWTIGDRGRRLDHIWVSEALR
ARVTDFKILRDARSWERPSDHVPVTVTMEL
NT seq 813 nt   +upstreamnt  +downstreamnt
atgtccttcacgctcacgacctggaacatcaattcggtgcggctacgcatcgagctggtg
gcgaaattcctcaaggcgcagcggccagacgtgctgtgccttcaggagaccaaatgcccg
gacgacgcgtttccggcgaagcgcttcaagcggctcggctacgagcacatcgcgctcaac
ggccagaagggctatcacggcgtcgcggtgatctcgaagatcccgtttctcgccaccgac
atccgcaccttctgcgacaatatcgactcgcgccacatctcggtgtcgctgcagaccggc
gcggccgatccgccgctgctgctgcataatttctacgtgcccgccggcggcgacattccc
gatcccgaggccaatccgaaattcaaacacaagctgtcgttcctcgacgagatgcgggcc
tgcgcgccgctgcatccgtcgggcgacgcgcggcacattctggtcggcgacctcaacgtc
gcgccgcacgagcacgacgtctggtcgcacaagcagttacttaaagtcgtgtcgcacacc
ccggtggaatgcgacaagctgctcgcggtgcaggccgccggcaattgggtcgacgtcgcg
cgcgagcggattccgctgtcggagaagatctacacctggtggagctaccgcgccgccgac
tggacgatcggcgaccgcggccgcaggctcgaccacatctgggtctccgaagcgctgcgc
gcccgcgtcaccgacttcaagatcctgcgcgacgcccgcagctgggaacgcccgagcgac
cacgtcccggtgacggtgacgatggagctgtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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