KEGG   Rhodopseudomonas palustris HaA2: RPB_0619Help
Entry
RPB_0619          CDS       T00321                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rpb  Rhodopseudomonas palustris HaA2
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rpb00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    RPB_0619
Enzymes [BR:rpb01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     RPB_0619
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RPB_0619
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
JGI: 
UniProt: 
Position
complement(698153..699034)
Genome map
AA seq 293 aa AA seqDB search
MPELPEVETVRLGLQPAMEGFRIDRAMANRCDLRFPFQPDFAARLTGQTITGLGRRAKYL
LADLSSGDVLLMHLGMSGSFRVVNGAGDATPGEFHHPRSEDRTHDHVVFEMSSGARVIFN
DPRRFGFMKIFARAAIDDEPHLKGLGPEPLGNAFDAAMLARACAGKQTSLKAALLDQRVV
AGLGNIYVCEALWRAHLSPKRKASTLADRKGAPTDRAVRLVDAIRAVLGDAIKAGGSSLR
DHRQTSGELGYFQHSFAVYDREGERCRTPGCNGTVKRLVQNGRSTFWCSGCQT
NT seq 882 nt NT seq  +upstreamnt  +downstreamnt
atgcctgaactgcccgaagtcgaaaccgtccgcctcgggctgcagccggccatggaggga
ttccggatcgaccgcgcgatggcgaaccgctgcgatctgcggtttccgtttcaacccgac
ttcgccgcgcggctgaccgggcagaccatcaccgggctggggcgccgcgccaaatatctg
ttggccgatctgtcgagcggcgacgtgctgctgatgcatctcggcatgtcgggctcgttc
cgggtggtgaacggcgccggcgacgcgacgccgggcgagtttcaccatccgcgcagcgag
gaccgcacccacgatcacgtcgtgttcgagatgtcgagcggcgcgcgggtgatcttcaac
gacccgcggcgattcggcttcatgaagatctttgcgcgcgccgcgatcgacgacgagccg
catctcaaggggctcgggcccgagccattgggcaacgccttcgacgccgcgatgctggcg
cgggcctgcgccggcaagcagaccagcctgaaggcggcgctgctcgaccagcgcgtcgtc
gccgggctcggcaacatttatgtctgcgaggcgctgtggcgcgcgcatctgtcgccgaag
aggaaggcgtcgacgctggccgaccgcaaaggcgcgccgaccgatcgcgccgtgcggctg
gtggatgcaatccgcgccgtgctcggcgacgccatcaaggccggcggctcgtcactgcgc
gaccaccgccagacctccggcgaactcggttacttccagcattccttcgcggtgtacgac
cgcgaaggcgagcgctgccgcacgccgggatgcaatgggacggtgaagcggctggtgcag
aacgggcggtcgacgttctggtgttcgggttgccagacgtag

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