KEGG   Rhodopseudomonas palustris BisB18: RPC_0377Help
Entry
RPC_0377          CDS       T00336                                 

Definition
formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Orthology
K10563  
formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
rpc  Rhodopseudomonas palustris BisB18
Pathway
Base excision repair
Brite
KEGG Orthology (KO) [BR:rpc00001]
 Genetic Information Processing
  Replication and repair
   03410 Base excision repair
    RPC_0377
Enzymes [BR:rpc01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     RPC_0377
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     RPC_0377
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif Motif
Other DBs
NCBI-GI: 
NCBI-GeneID: 
UniProt: 
Position
complement(403844..404725)
Genome map
AA seq 293 aa AA seqDB search
MPELPEVETVRRGLEPAMAGARIDGFEARRADLRFALQPDLATRLIGQTVKGLGRRAKYL
LAELSSGDVLLMHLGMSGSFRVLQGEASGAPGAFHHPRNDDRAHDHVVFRMSNGAVVVFN
DPRRFGYMKILAPGEIADEPFLKGLGPEPLGNSFDAAMLASACAGRKTSLKAALLDQRVV
AGLGNIYVCEALFGAHLSPKRLAATLATRTGAPTERAERLVEAIRAVLHAAIKAGGSSLR
DHRQTSGELGYFQHSFAVYDREGEPCRSKGCDGVVKRFVQNGRSTFWCPKCQK
NT seq 882 nt NT seq  +upstreamnt  +downstreamnt
atgccggaattgcccgaagtcgaaaccgtccggcgcgggctcgagccggccatggcgggc
gcgcggatcgacggcttcgaggcgcggcgcgccgatctgcgctttgcgctgcagccggat
ctggccacgcggctgatcggccagaccgtcaaggggctcggccggcgggcgaaatatctt
ttggcggaactgtcgagcggcgacgtgctgttgatgcatctcgggatgtcgggctcgttc
cgggtgctgcagggcgaggcgtccggcgcgccgggggcgtttcaccatccgcgcaacgac
gaccgcgcccatgatcacgtggtgttccggatgtcgaacggcgcggtggtggtgttcaac
gatccgcgccgcttcggctatatgaaaatcctggcgccgggcgagatcgccgacgagccg
tttctcaaaggtttgggcccggagccgctcggcaattcgttcgacgcggcgatgctggcg
tcggcctgcgccggccgcaaaaccagcctcaaggcggcgctgttggaccagcgcgtggtc
gcggggctcggcaacatctatgtctgcgaggcgctgttcggcgcgcatctgtcgccgaaa
cgactcgcggcgacgctggcgacccgaacgggcgcgccgaccgagcgcgccgagcggctg
gtcgaggcgatccgcgcggtgctgcacgcggcgatcaaggccggaggctcgtcgttgcgc
gaccaccgccagacctcgggcgaactcggctatttccagcattccttcgcggtctacgac
cgcgagggcgaaccctgccgcagcaaaggctgcgacggggtggtgaagcgcttcgtacag
aacggccgctccaccttctggtgcccgaagtgccagaagtga

DBGET integrated database retrieval system