KEGG T00345: RPD

Rhodopseudomonas palustris BisB5: RPD_0462

Entry

RPD_0462 CDS T00345

Definition

RuBisCO-like protein

Orthology

K01601

ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39]

Organism

rpd Rhodopseudomonas palustris BisB5

Pathway

rpd00630	Glyoxylate and dicarboxylate metabolism
rpd00710	Carbon fixation in photosynthetic organisms
rpd01100	Metabolic pathways
rpd01120	Microbial metabolism in diverse environments

Class

Metabolism; Carbohydrate metabolism; Glyoxylate and dicarboxylate metabolism [PATH:rpd00630]
Metabolism; Energy metabolism; Carbon fixation in photosynthetic organisms [PATH:rpd00710]

SSDB

Motif

Pfam:

RuBisCO_large RuBisCO_large_N

Other DBs

NCBI-GI:

NCBI-GeneID:

JGI:

UniProt:

Position

complement(530582..531880)

AA seq 432 aa
MTPDDIAGFYAKRSDLNLDDYIELDFDFECAGDPREAAAHLCSEQSTAQWRRVGVDEDFR
PRFAAKVLELHAEPRPSGFSTPVECAVRGEVHACRVTIAHPHGNFGPKIPNLLSAVCGEG
VFFSPGIPLIRLQDIRFPDSYLAAFAGPQFGVAGLRERLKAFDRPIFFGVIKPNIGLSAE
PFAELGYQSWLGGLDIAKDDEMLADVDWCPLAERAALLGDACRRAEAETGVPKIYLANIT
DEVDRLIELHDLAVSNGAGALLVNAMPVGLSAVRMLRKHATVPLIAHFPFIAAFSRLANY
GIHSRVMTRLQRLAGFDVVIMPGFGPRMMTPEHEVMDCVRACLEPMGPIKPCLPVPGGSD
SAATLESVYRKVGCADFGFVPGRGVFGHPMGPAAGAASIRQAWDAIASGIAVSDHAARHP
ELAAALRAFGGR

NT seq 1299 nt +upstreamnt +downstreamnt
atgactccggacgacattgcgggcttctacgcgaagcgctcggatctcaatctcgacgac
tacatcgagctggatttcgatttcgaatgcgccggcgatccgcgcgaggccgcggcgcat
ctgtgcagtgagcaatccaccgcgcaatggcgccgcgtcggcgtcgacgaggacttccgg
ccgcgctttgccgcgaaagtgctggagcttcacgccgagccgcggccgtcgggcttcagc
acgccggtcgaatgcgcggtgcgcggcgaggtgcatgcctgccgcgtgacgatcgcgcat
ccgcacggcaatttcggcccgaagattccgaatctgctgtcggccgtctgcggggaaggc
gtgttcttctcgccgggcattccgctgatccggctgcaggacatccggtttcccgacagc
tatctggccgcctttgccggcccgcaattcggcgtcgccggattgcgcgaacggctgaag
gctttcgatcggccgatcttcttcggcgtgatcaagccgaatatcgggttgtcggcggag
ccgttcgccgaactcggctatcagagctggctcggcgggctcgatatcgccaaggacgac
gagatgctcgccgacgtcgactggtgtccgctcgccgagcgcgcagcattgctcggcgac
gcctgccggcgcgcggaagccgagaccggcgtgccgaagatctatctggccaacatcacc
gacgaggtcgaccggctgatcgagctgcacgatctcgcggtcagcaacggcgccggcgcg
ctgctggtcaatgcgatgccggtcggcctttcggcggtgcggatgctgcgcaagcacgcc
accgtgccgctgattgcgcatttcccgttcatcgcggcgttcagccggctcgccaattac
ggcattcattcgcgggtgatgacgcggctgcagcggctggcgggtttcgacgtggtgatc
atgccgggcttcgggccacggatgatgacgccggagcacgaggtgatggactgcgtgcgg
gcctgtctggagccgatggggccgatcaagccgtgcctgccggtgccgggcggcagcgat
tccgcggcaacgctggagtcggtgtatcgcaaggtcggctgcgccgatttcggtttcgtg
ccgggccgcggcgtgttcggccatccgatgggaccggccgcgggcgcggcctcgatccgt
caggcctgggatgcgatcgcctccggcattgcggtcagcgaccacgccgcccgccatccg
gaactggcggcggcgttgcgggcgttcggcggccgctga

All links

Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-Gene (1)   
   NCBI-GI (1)   
   JGI-RPD (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

Download RDF

DBGET integrated database retrieval system